JAL-3626 Regex optimization from JAL-3253-applet; also minor
authorBobHanson <hansonr@stolaf.edu>
Mon, 1 Jun 2020 21:10:28 +0000 (16:10 -0500)
committerBobHanson <hansonr@stolaf.edu>
Mon, 1 Jun 2020 21:10:28 +0000 (16:10 -0500)
commit76821e9f28923b6f3ae8f226e01d0156e7b7f847
tree2b950831ed88fc65db24327587c7f1f0225eb5a4
parente7511d42dc76995533b2934c71d2611dd5796abc
JAL-3626 Regex optimization from JAL-3253-applet; also minor
StockholmFile for loop opt.
16 files changed:
src/jalview/analysis/Finder.java
src/jalview/analysis/ParseProperties.java
src/jalview/ext/ensembl/EnsemblCdna.java
src/jalview/ext/ensembl/EnsemblGene.java
src/jalview/ext/ensembl/EnsemblProtein.java
src/jalview/ext/ensembl/EnsemblSequenceFetcher.java
src/jalview/io/ModellerDescription.java
src/jalview/io/NewickFile.java
src/jalview/io/RnamlFile.java
src/jalview/io/StockholmFile.java
src/jalview/util/DBRefUtils.java
src/jalview/util/Platform.java
src/jalview/ws/dbsources/EmblCdsSource.java
src/jalview/ws/dbsources/EmblSource.java
src/jalview/ws/dbsources/Pdb.java
src/jalview/ws/dbsources/Uniprot.java