Jalview-JS/JAL-3253-applet more argument parsing
authorhansonr <hansonr@STO24954W.ad.stolaf.edu>
Fri, 17 May 2019 18:45:28 +0000 (13:45 -0500)
committerhansonr <hansonr@STO24954W.ad.stolaf.edu>
Fri, 17 May 2019 18:45:28 +0000 (13:45 -0500)
commit81ca65d00bdb8a49fa063272ce53fdc8758c2264
treea8305158fbe73958177f4e3865c0bb6167c6b6db
parentcb597de858c70703321daa67adef5089957e9f55
Jalview-JS/JAL-3253-applet more argument parsing

trying to simplify the sourcing of parametric data:

applet origin: <applet><param>
application origin: Info.args
preference file origin: Info.XXXX_YYYY

Close to full implementation of all three.

Next: Moving Jalview API to a jointly accessible class for Jalview(JS) and JalviewLite (deprecated, but still there).
src/jalview/bin/AppletParams.java
src/jalview/bin/ArgsParser.java
src/jalview/bin/Jalview.java
src/jalview/bin/JalviewAppLoader.java
src/jalview/bin/JalviewLite.java
src/jalview/fts/core/FTSRestRequest.java
src/jalview/fts/service/uniprot/UniProtFTSRestClient.java
src/jalview/ws/dbsources/Uniprot.java