JAL-2428 separate TreeModel from TreeBuilder/NJTree/AverageDistanceTree
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Mon, 6 Mar 2017 09:45:54 +0000 (09:45 +0000)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Mon, 6 Mar 2017 09:45:54 +0000 (09:45 +0000)
commitbe27d7b3cadbfb5c488066034c48b1735799b429
tree87114c8d40516fcdc90ef5efa1580340d9524fef
parentf96bae28bd23436052433c8d5e02447f46086248
JAL-2428 separate TreeModel from TreeBuilder/NJTree/AverageDistanceTree
(first pass)
16 files changed:
src/jalview/analysis/AlignmentSorter.java
src/jalview/analysis/AverageDistanceTree.java [new file with mode: 0644]
src/jalview/analysis/NJTree.java
src/jalview/analysis/TreeBuilder.java [new file with mode: 0644]
src/jalview/analysis/TreeModel.java [new file with mode: 0644]
src/jalview/appletgui/AlignViewport.java
src/jalview/appletgui/TreeCanvas.java
src/jalview/appletgui/TreePanel.java
src/jalview/gui/AlignViewport.java
src/jalview/gui/Jalview2XML.java
src/jalview/gui/TreeCanvas.java
src/jalview/gui/TreeChooser.java
src/jalview/gui/TreePanel.java
src/jalview/io/packed/JalviewDataset.java
src/jalview/io/vamsas/Tree.java
test/jalview/io/NewickFileTests.java