JAL-3559 temporary branch adding JS files complete Jalview-JS/develop-JAL-3559
authorBobHanson <hansonr@stolaf.edu>
Wed, 18 Mar 2020 17:44:11 +0000 (12:44 -0500)
committerBobHanson <hansonr@stolaf.edu>
Wed, 18 Mar 2020 17:44:11 +0000 (12:44 -0500)
commitce270fef5a3e00b57f0b2077800796c3654ac68f
treee15473cd82d61a9c1617fff7dd48baaa8524d04e
parentda98b580a62f583db2e12c8910e6d68862c22623
JAL-3559 temporary branch adding JS files complete
91 files changed:
.gitignore
.settings/.jsdtscope [new file with mode: 0644]
.settings/org.eclipse.wst.jsdt.ui.superType.container [new file with mode: 0644]
.settings/org.eclipse.wst.jsdt.ui.superType.name [new file with mode: 0644]
build-libjs.xml [new file with mode: 0644]
build-site.xml [new file with mode: 0644]
build.Bob-Windows.xml [new file with mode: 0644]
buildcore.xml [new file with mode: 0644]
libjs/MiGLayout-site.zip [new file with mode: 0644]
libjs/VARNA-site.zip [new file with mode: 0644]
libjs/intervalstore-site.zip [new file with mode: 0644]
libjs/jmol-app.zip [new file with mode: 0644]
site-resources/applets-nocore.html [new file with mode: 0644]
site-resources/applets.html [new file with mode: 0644]
site-resources/css/ie6.css [new file with mode: 0644]
site-resources/css/ie7.css [new file with mode: 0644]
site-resources/css/reset.css [new file with mode: 0644]
site-resources/css/style.css [new file with mode: 0644]
site-resources/examples/1gaq.txt [new file with mode: 0644]
site-resources/examples/2GIS.pdb [new file with mode: 0644]
site-resources/examples/3W5V.pdb [new file with mode: 0644]
site-resources/examples/PF00111_seed.stk [new file with mode: 0644]
site-resources/examples/RF00031_folded.stk [new file with mode: 0644]
site-resources/examples/backupfilestest.fa [new file with mode: 0644]
site-resources/examples/biojsonschema.json [new file with mode: 0644]
site-resources/examples/dna_interleaved.phy [new file with mode: 0644]
site-resources/examples/dna_sequential.phy [new file with mode: 0644]
site-resources/examples/estrogenReceptorCdna.fa [new file with mode: 0644]
site-resources/examples/estrogenReceptorCdna_aln.fa [new file with mode: 0644]
site-resources/examples/estrogenReceptorCdna_frag.fa [new file with mode: 0644]
site-resources/examples/estrogenReceptorProtein.aln [new file with mode: 0644]
site-resources/examples/estrogenReceptorProtein.fa [new file with mode: 0644]
site-resources/examples/estrogenReceptorProtein_aln.fa [new file with mode: 0644]
site-resources/examples/estrogenReceptorProtein_frag.fa [new file with mode: 0644]
site-resources/examples/example.json [new file with mode: 0644]
site-resources/examples/exampleFeatures.txt [new file with mode: 0644]
site-resources/examples/ferredoxin.nw [new file with mode: 0644]
site-resources/examples/jaxbtest.jvx [new file with mode: 0644]
site-resources/examples/jpred_msa.fasta [new file with mode: 0644]
site-resources/examples/jpred_msa.seq.concise [new file with mode: 0644]
site-resources/examples/plantfdx.annotations [new file with mode: 0644]
site-resources/examples/plantfdx.fa [new file with mode: 0644]
site-resources/examples/plantfdx.features [new file with mode: 0644]
site-resources/examples/rna_ss_test.stk [new file with mode: 0644]
site-resources/examples/unfolded_RF00031.aln [new file with mode: 0644]
site-resources/examples/uniref50.fa [new file with mode: 0644]
site-resources/examples/uniref50.score_ascii [new file with mode: 0644]
site-resources/examples/uniref50_mz.fa [new file with mode: 0644]
site-resources/images/coolJalviewBackgroundFading.png [new file with mode: 0644]
site-resources/images/coolVeryLightBG.png [new file with mode: 0644]
site-resources/jalview_bin_JalviewJS2.html [new file with mode: 0644]
site-resources/jalview_bin_JalviewJS_core.html [new file with mode: 0644]
site-resources/jalview_embedded_example1.html [new file with mode: 0644]
site-resources/javascript/deployJava.js [new file with mode: 0644]
site-resources/javascript/facebox-1.3.js [new file with mode: 0644]
site-resources/javascript/jalview.js [new file with mode: 0644]
site-resources/javascript/jquery-1.4.4.min.js [new file with mode: 0644]
site-resources/javascript/jquery.blockUI.js [new file with mode: 0644]
site-resources/javascript/jquery.timer.js [new file with mode: 0644]
site-resources/javascript/jshashtable-2.1.js [new file with mode: 0644]
site-resources/javascript/jvcontroller.js [new file with mode: 0644]
site-resources/swingjs/JalviewApplet.js [new file with mode: 0644]
swingjs/SwingJS-site.zip
swingjs/_j2sclasslist.txt
swingjs/net.sf.j2s.core.jar
swingjs/timestamp
swingjs/ver/3.2.7/DEV_NOTES.txt [new file with mode: 0644]
swingjs/ver/3.2.7/SwingJS-site.zip [new file with mode: 0644]
swingjs/ver/3.2.7/_j2sclasslist.txt [new file with mode: 0644]
swingjs/ver/3.2.7/net.sf.j2s.core.jar [new file with mode: 0644]
swingjs/ver/3.2.7/timestamp [new file with mode: 0644]
swingjs/ver/3.2.8/DEV_NOTES.txt [new file with mode: 0644]
swingjs/ver/3.2.8/SwingJS-site.zip [new file with mode: 0644]
swingjs/ver/3.2.8/_j2sclasslist.txt [new file with mode: 0644]
swingjs/ver/3.2.8/net.sf.j2s.core.jar [new file with mode: 0644]
swingjs/ver/3.2.8/timestamp [new file with mode: 0644]
swingjs/ver/3.2.9/DEV_NOTES.txt [new file with mode: 0644]
swingjs/ver/3.2.9/SwingJS-site.zip [new file with mode: 0644]
swingjs/ver/3.2.9/_j2sclasslist.txt [new file with mode: 0644]
swingjs/ver/3.2.9/net.sf.j2s.core.jar [new file with mode: 0644]
swingjs/ver/3.2.9/timestamp [new file with mode: 0644]
unused/j8lib/javax.activation-api-1.2.0.jar [new file with mode: 0644]
unused/j8lib/javax.annotation-api-1.3.2.jar [new file with mode: 0644]
unused/j8lib/javax.jws-api-1.1.jar [new file with mode: 0644]
unused/j8lib/javax.servlet-api-4.0.1.jar [new file with mode: 0644]
unused/j8lib/javax.xml.rpc-api-1.1.2.jar [new file with mode: 0644]
unused/j8lib/javax.xml.soap-api-1.4.0.jar [new file with mode: 0644]
unused/j8lib/jaxb-api-2.3.1.jar [new file with mode: 0644]
unused/j8lib/jaxb-runtime-2.3.2.jar [new file with mode: 0644]
unused/j8lib/jaxws-api-2.3.1.jar [new file with mode: 0644]
unused/j8lib/jaxws-rt-java9.jar [new file with mode: 0644]