tidied up system.out messages and moved many to stderr.
authorjprocter <Jim Procter>
Wed, 25 May 2005 13:35:22 +0000 (13:35 +0000)
committerjprocter <Jim Procter>
Wed, 25 May 2005 13:35:22 +0000 (13:35 +0000)
commite5127e5f27f02c8f328539eaac68eabfbee1d135
tree32ff176d2c83be7a57785c767dc1731779cb212a
parent65b94714ece0726653890609ed1136708cf77997
tidied up system.out messages and moved many to stderr.
34 files changed:
src/MCview/PDBChain.java
src/MCview/PDBfile.java
src/MCview/rotCanvas.java
src/jalview/analysis/Conservation.java
src/jalview/analysis/NJTree.java
src/jalview/analysis/PCA.java
src/jalview/appletgui/AlignFrame.java
src/jalview/appletgui/AlignViewport.java
src/jalview/appletgui/AlignmentPanel.java
src/jalview/appletgui/OverviewPanel.java
src/jalview/appletgui/RotatableCanvas.java
src/jalview/bin/Jalview.java
src/jalview/datamodel/Alignment.java
src/jalview/datamodel/BinarySequence.java
src/jalview/gui/AlignFrame.java
src/jalview/gui/AlignViewport.java
src/jalview/gui/AlignmentPanel.java
src/jalview/gui/Jalview2XML.java
src/jalview/gui/OverviewPanel.java
src/jalview/gui/RotatableCanvas.java
src/jalview/io/BLCFile.java
src/jalview/io/ClustalFile.java
src/jalview/io/EBIFetchClient.java
src/jalview/io/JPredFile.java
src/jalview/io/JalviewFileChooser.java
src/jalview/io/JalviewFileView.java
src/jalview/io/MSFfile.java
src/jalview/io/NewickFile.java
src/jalview/io/PfamFile.java
src/jalview/io/WSWUBlastClient.java
src/jalview/math/Matrix.java
src/jalview/schemes/NucleotideColourScheme.java
src/jalview/ws/JPredClient.java
src/jalview/ws/MsaWSClient.java