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(parent: 0725af2) | patch
JAL-2909 separate reverse and forward strand reads. fix subtle bug in handling insert... feature/JAL-2909bamfiles_features
authorJim Procter <jprocter@issues.jalview.org>
Tue, 20 Mar 2018 16:34:10 +0000 (16:34 +0000)
committerJim Procter <jprocter@issues.jalview.org>
Tue, 20 Mar 2018 16:34:10 +0000 (16:34 +0000)
commit429bbdae3d5229ec1b92ec59f4b5a25bcfcf13f8
tree43734912fb3a60333cb26b0f664a19a461de5073tree | snapshot
parent0725af253ee4f4e70e232cfdb673f6ccffbdf2dfcommit | diff
JAL-2909 separate reverse and forward strand reads. fix subtle bug in handling inserts. gross hack & WIP to try to get reference sequences added to alignment (doesn’t work - see FIXME)
src/jalview/datamodel/CigarParser.java diff | blob | history
src/jalview/io/BamFile.java diff | blob | history