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JAL-629 Small buglet with getting --seqid
[jalview.git] / help /
2023-08-28 James ProcterJAL-4090 JAL-4250 JAL-4253 JAL-325 release notes and... tree | commitdiff
2023-08-17 James ProcterJAL-4090 JAL-4243 bio.tools json file release notes tree | commitdiff
2023-07-17 James ProcterJAL-4090 JAL-4165 known issue tree | commitdiff
2023-07-17 James ProcterJAL-4090 JAL-4165 known issue tree | commitdiff
2023-07-17 James ProcterJAL-4090 mark JAL-4178 and JAL-4142 as known issues tree | commitdiff
2023-07-07 James ProcterJAL-4090 update 2.11.3.0 release notes (with in-progres... tree | commitdiff
2023-07-04 James ProcterJAL-4117 Fri June 30th release of 2.11.2.7 with Jalview... tree | commitdiff
2023-06-30 James ProcterJAL-4216 release notes tree | commitdiff
2023-06-29 James ProcterJAL-4117 JAL-4001 plausible analytics release notes... tree | commitdiff
2023-06-29 James ProcterJAL-4090 update from 2.11.2.7 JAL-4117 - version bump... tree | commitdiff
2023-06-07 James ProcterMerge branch 'patch/JAL-4195_cli_eps_export_npe' into... tree | commitdiff
2023-06-07 Ben SoaresMerge branch 'develop' into improvement/JAL-4193_cl_arg... improvement/JAL-4193_cl_arg_prevent_startup_file tree | commitdiff
2023-06-06 James ProcterJAL-4160 --colour can now take user defined scheme... tree | commitdiff
2023-06-02 James ProcterJAL-4090 update 2.11.3.0 release notes for recent merges tree | commitdiff
2023-06-01 Ben SoaresJAL-4193 JAL-4194 sessionProperties layer in Cache... tree | commitdiff
2023-06-01 Ben SoaresJAL-629 better reference text for --nousagestats tree | commitdiff
2023-05-30 Ben SoaresJAL-629 JAL-4121 Added documentation to Help docs and... tree | commitdiff
2023-05-23 Ben SoaresJAL-629 Updated help docs and fixed structure image... tree | commitdiff
2023-05-23 Ben SoaresJAL-629 Added --structureimage code and formatting... tree | commitdiff
2023-05-18 Ben SoaresJAL-629 fixes to help docs tree | commitdiff
2023-05-17 Ben SoaresJAL-629 Changed some old -arg to --arg in help docs... tree | commitdiff
2023-05-17 Ben SoaresJAL-629 tidying the help docs tree | commitdiff
2023-05-17 Ben SoaresMerge branch 'develop' into features/r2_11_2_alphafold... tree | commitdiff
2023-05-17 James ProcterJAL-4184 release notes tree | commitdiff
2023-05-16 Ben SoaresJAL-629 Finished documentation for new command lines. tree | commitdiff
2023-05-15 Ben SoaresJAL-629 More help text tree | commitdiff
2023-05-13 Ben SoaresJAL-629 launcher shell script uses jalview.bin.Launcher... tree | commitdiff
2023-05-12 Ben SoaresJAL-629 More docs tree | commitdiff
2023-05-11 Ben SoaresJAL-629 Add some shortnames to args. Add Opt.OUTPUT... tree | commitdiff
2023-05-11 Ben SoaresJAL-629 Move clarguments documentation to default.... tree | commitdiff
2023-05-10 Ben SoaresJAL-629 More docs. Usage statement. Adjust some logging... tree | commitdiff
2023-05-09 Ben SoaresJAL-629 Add --seqid for non-subval use, make arg value... tree | commitdiff
2023-05-09 Ben SoaresJAL-629 update a subval for structureviewer in the... tree | commitdiff
2023-05-09 Ben SoaresJAL-629 more docs tree | commitdiff
2023-05-03 Ben SoaresJAL-629 a bit more documentation tree | commitdiff
2023-04-28 Ben SoaresJAL-629 Change colour scheme shortnames to something... tree | commitdiff
2023-04-27 Ben SoaresJAL-629 start of help text tree | commitdiff
2023-02-15 James ProcterJAL-4090 move 2.11.3 series release notes to 2.11.3... tree | commitdiff
2023-02-03 James ProcterMerge branch 'develop' into features/r2_11_2_alphafold... tree | commitdiff
2023-01-25 James ProcterJAL-4117 - version bump and release notes for JAL-4116 tree | commitdiff
2023-01-25 James ProcterMerge branch 'new_feature/JAL-4019_ambiguous_base_colou... tree | commitdiff
2023-01-24 James ProcterJAL-4090 Release 2.11.3.0 release notes and version... tree | commitdiff
2023-01-24 James ProcterMerge branch 'develop' (JAL-4102 2.11.2.6 patch release... features/r2_11_2_alphafold/JAL-2349_JAL-3855 tree | commitdiff
2023-01-23 James ProcterJAL-4104 JAL-4102 update help docs with script to add... Release_2_11_2_6 tree | commitdiff
2023-01-23 Jim ProcterJAL-4102 whatsNew for 2.11.2.6 tree | commitdiff
2023-01-20 Jim ProcterJAL-4102 update date and release notes for 2.11.2.6 tree | commitdiff
2022-11-30 Jim ProcterJAL-4102 2.11.2.6 hotfix release notes - JAL-4101 JAL... tree | commitdiff
2022-11-17 Ben SoaresJAL-4019 Clarification of position on 'X' in help text tree | commitdiff
2022-11-13 Ben SoaresJAL-4019 small colour fix for X in the documentation tree | commitdiff
2022-11-13 Ben SoaresJAL-4019 attribution to Suzanne tree | commitdiff
2022-11-13 Ben SoaresJAL-4019 Help pages for Nucleotide Ambiguity colour... tree | commitdiff
2022-10-29 Jim ProcterJAL-4090 bump version and set up release notes for... tree | commitdiff
2022-10-29 Jim ProcterMerge branch 'features/JAL-4061_and_JAL-4062_findselect... tree | commitdiff
2022-10-11 Jim ProcterJAL-4065 final fix for 2.11.2.5 - 5pm BST release tree | commitdiff
2022-10-11 Jim ProcterJAL-4065 revised to avoid a visit from the apostrophe... tree | commitdiff
2022-10-11 Ben SoaresJAL-4014 Changed gecos display names to match labels... tree | commitdiff
2022-10-11 Jim ProcterJAL-4065 revised whatsNew to make sense ! tree | commitdiff
2022-10-11 Jim ProcterJAL-4065 release 2.11.2.5 date is 11th Oct tree | commitdiff
2022-10-07 Jim ProcterJAL-4065 update citations for Pfam and Rfam and added... tree | commitdiff
2022-10-07 Jim ProcterJAL-4065 release notes and updated release date for... tree | commitdiff
2022-10-06 Jim ProcterJAL-4065 release notes for JAL-4073 JAL-4074 tree | commitdiff
2022-09-16 Jim ProcterJAL-4065 release notes for JAL-4061 JAL-4062 features/JAL-4061_and_JAL-4062_findselectfeatures tree | commitdiff
2022-09-16 Jim ProcterJAL-4062 copy highlighted region docs, new Alignment... tree | commitdiff
2022-09-15 Jim ProcterJAL-4061 JAL-4062 documentation and button labels.... tree | commitdiff
2022-09-15 Jim ProcterJAL-4065 release notes for JAL-4014 and JAL-4063 in... tree | commitdiff
2022-09-15 Jim ProcterJAL-4065 - new release notes featuring JAL-3612 fix tree | commitdiff
2022-08-08 Jim ProcterJAL-4046 release on 9th August 2022 tree | commitdiff
2022-08-08 Jim ProcterJAL-4046 JAL-3993 patch for 2.11.2.4 release tree | commitdiff
2022-08-08 Jim ProcterJAL-4046 release notes for JAL-3991 tree | commitdiff
2022-08-08 Jim ProcterJAL-4046 release notes for JAL-4014 - gecos colourschemes tree | commitdiff
2022-08-08 Jim ProcterMerge branch 'improvement/JAL-4014_gecos_colour_schemes... tree | commitdiff
2022-08-08 Jim ProcterJAL-4056 documented in release notes for JAL-4043 tree | commitdiff
2022-08-08 Jim ProcterMerge branch 'patch/JAL-4036_uniprot_fts_legacy_endpoin... tree | commitdiff
2022-08-08 Jim ProcterJAL-4043 what’s new, updated help images and release... tree | commitdiff
2022-07-26 Ben SoaresJAL-4036 Added text to help about different number... tree | commitdiff
2022-07-25 Ben SoaresJAL-4036 updated help about new UniProt API tree | commitdiff
2022-07-20 Jim ProcterJAL-4046 started release notes for 2.11.2.4 patch release tree | commitdiff
2022-07-05 Jim ProcterJAL-4012 release date bump and JAL-4004 tweak to includ... tree | commitdiff
2022-07-04 Jim ProcterJAL-4012 updated release date and whats new for 2.11.2.3 tree | commitdiff
2022-07-01 Jim ProcterJAL-4012 tweak release notes wording for legacy.uniprot tree | commitdiff
2022-07-01 Jim ProcterJAL-4036 JAL-4012 note about Uniprot FTS workaround... tree | commitdiff
2022-06-15 Jim ProcterJAL-4012 release notes for JAL-1988,JAL-3416 tree | commitdiff
2022-06-09 Jim ProcterJAL-4012 - JAL-4020 release notes and a bit of ‘trouble... tree | commitdiff
2022-06-09 Jim ProcterJAL-4004 add the autogenerated whatsNew.html and releas... tree | commitdiff
2022-06-09 Jim ProcterJAL-4014 release notes for JAL-4026 patches tree | commitdiff
2022-06-08 Jim ProcterJAL-4014 release notes for JAL-4023 and JAL-4024 tree | commitdiff
2022-06-08 Jim ProcterJAL-4012 what’s new and release notes (in the new style... tree | commitdiff
2022-06-08 Jim ProcterJAL-4004 delete temporary file mistakenly checked in tree | commitdiff
2022-05-12 Ben SoaresMerge branch 'develop' into issues/JAL-3553+JAL-3978... issues/JAL-3553+JAL-3978+JAL-3989+JAL-4004_merged_with_develop tree | commitdiff
2022-05-12 Ben SoaresJAL-4014 4 gecos colour schemes added to help documentation improvement/JAL-4014_gecos_colour_schemes tree | commitdiff
2022-05-11 Jim ProcterJAL-4012 JAL-4008 release notes for Jalview 2.11.2.3 tree | commitdiff
2022-05-10 Ben SoaresJAL-4004 cosmetic improvements for Java documentation... tree | commitdiff
2022-05-09 Ben SoaresJAL-4004 working templates and generated whatsNew.html... tree | commitdiff
2022-05-09 Ben SoaresJAL-4004 remove stray empty h3 headers tree | commitdiff
2022-05-09 Ben SoaresJAL-4004 gradle releasesTemplates builds releases.html tree | commitdiff
2022-05-05 Ben SoaresJAL-4004 Now generating hugo files from help/markdown/... tree | commitdiff
2022-05-04 Ben SoaresJAL-4004 existing releases-VERSION.md files and release... tree | commitdiff
2022-05-04 Ben SoaresJAL-4004 locations for markdown to go into whatsnew... tree | commitdiff
2022-05-03 Ben SoaresJAL-1544 minor errors in releases.html and one missing... tree | commitdiff
2022-04-27 Ben SoaresJAL-1544 version number typo, probably copy and paste tree | commitdiff
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