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JAL-3878 Add RNAalifold service discovery.
[jalview.git] / src /
2021-11-17 Mateusz WarownyJAL-3878 Add RNAalifold service discovery. JAL-3878_web_services_overhaul tree | commitdiff
2021-11-12 Mateusz WarownyJAL-3878 Add javadocs to created classes and reformat... tree | commitdiff
2021-11-10 Mateusz WarownyJAL-3878 Remove redundand edit params dialog method... tree | commitdiff
2021-11-08 Mateusz WarownyJAL-3878 Separate gui elements from operations. tree | commitdiff
2021-10-21 Mateusz WarownyJAL-3878 Make interactive service arguments persistent... tree | commitdiff
2021-10-21 Mateusz WarownyJAL-3878 Create proper menu for interactive services. tree | commitdiff
2021-10-21 Mateusz WarownyJAL-3878 Add methods to get and remove workers by their... tree | commitdiff
2021-10-20 Mateusz WarownyJAL-3878 Create WebServiceMenuBuilder which will replac... tree | commitdiff
2021-10-20 Mateusz WarownyJAL-3878 Annotation comments and questions tree | commitdiff
2021-10-19 Mateusz WarownyJAL-3878 Add annotation operations to slivka discoverer. tree | commitdiff
2021-10-19 Mateusz WarownyJAL-3878 Fix sequences not being gathered when submitti... tree | commitdiff
2021-10-19 Mateusz WarownyJAL-3878 Rename annotation provider method to getAnnota... tree | commitdiff
2021-10-19 Mateusz WarownyJAL-3878 Set job status to cancelled on job cancellation. tree | commitdiff
2021-10-19 Mateusz WarownyJAL-3878 Start interactive job by registering them... tree | commitdiff
2021-10-19 Mateusz WarownyJAL-3878 Fix progress updater bar to account for cancel... tree | commitdiff
2021-10-19 Mateusz WarownyJAL-3878 Refactoring SeqAnnotationServiceCalcWorker. tree | commitdiff
2021-10-13 Mateusz WarownyJAL-3878 Add getCalcName to AlignCalcWorkerI. tree | commitdiff
2021-10-13 Mateusz WarownyJAL-3878 Rename web service worker to more generic... tree | commitdiff
2021-10-09 Mateusz WarownyUpdate annotation operation WIP tree | commitdiff
2021-10-07 Mateusz WarownyJAL-3878 Add dataset and viewport arguments to ResultSu... tree | commitdiff
2021-10-05 Mateusz WarownyJAL-3878 Annotation operation skeleton. tree | commitdiff
2021-10-01 Mateusz WarownyJAL-3878 Fix workers done condition to account for... tree | commitdiff
2021-09-30 Mateusz WarownyJAL-3878 Skip getting results of failed jobs. tree | commitdiff
2021-09-30 Mateusz WarownyJAL-3878 Add job log messages reporting. tree | commitdiff
2021-09-30 Mateusz WarownyJAL-3878 Fix null pointer exception when preparing... tree | commitdiff
2021-09-30 Mateusz WarownyJAL-3878 Fetch sequences for alignment on menu action... tree | commitdiff
2021-09-30 Mateusz WarownyJAL-3878 Split web services menu entries by programs... tree | commitdiff
2021-09-29 Mateusz WarownyJAL-3878 Add isInteractive() method to Operation interface. tree | commitdiff
2021-09-29 Mateusz WarownyJAL-3878 Add getName() to Operation interface. tree | commitdiff
2021-09-27 Mateusz WarownyJAL-3878 Wire web services logic to UI elements. tree | commitdiff
2021-09-24 Mateusz WarownyJAL-3878 Fire service changed event after discovery... tree | commitdiff
2021-09-24 Mateusz WarownyJAL-3878 Fix incorrect value of isRunning in SlivkaWSDi... tree | commitdiff
2021-09-24 Mateusz WarownyJAL-3878 Move operation type from WebService to Operation. tree | commitdiff
2021-09-24 Mateusz WarownyJAL-3878 Code reformatting. tree | commitdiff
2021-09-24 Mateusz WarownyJAL-3878 Display results of completed alignment job tree | commitdiff
2021-09-24 Mateusz WarownyJAL-3878 Change SERVER_ERROR.isSubmitted to false. tree | commitdiff
2021-09-24 Mateusz WarownyJAL-3878 Move WSJob instantiation out of WebService... tree | commitdiff
2021-09-20 Mateusz WarownyJAL-3878 Implement AlignmentOperation WIP tree | commitdiff
2021-09-20 Mateusz WarownyJAL-3878 Create interface for web service operations tree | commitdiff
2021-09-20 Mateusz WarownyJAL-3878 Implement slivka web service and discoverer. tree | commitdiff
2021-09-20 Mateusz WarownyJAL-3878 Add web service executor class and instantiate... tree | commitdiff
2021-09-20 Mateusz WarownyJAL-3878 Create base interfaces for new web services. tree | commitdiff
2021-09-20 Mateusz WarownyJAL-3878 Remove throws declaration from param store... tree | commitdiff
2021-09-20 Mateusz WarownyJAL-3878 Create Slivka Web Service adapter. tree | commitdiff
2021-09-20 Mateusz WarownyJAL-3878 Initial preparation. tree | commitdiff
2021-07-29 Mateusz WarownyMerge branch 'improvement/JAL-3848_slivka_0.8' into... tree | commitdiff
2021-07-27 Mateusz WarownyMerge branch 'bug/JAL-3807_jpred-with-slivka' into... tree | commitdiff
2021-07-27 Mateusz WarownyMerge commit '0b438477b16470202bddfecb54e0587036b37202... tree | commitdiff
2021-07-27 Mateusz WarownyJAL-3066 Fix NullPointerException thrown when showing... tree | commitdiff
2021-07-25 Jim ProcterJAL-3854 patched SeqSeqUtils.deUniquify to not use... improvement/JAL-3848_slivka_0.8 tree | commitdiff
2021-07-25 Jim ProcterJAL-3848 slivka preferences in javascript tree | commitdiff
2021-07-25 Jim ProcterJAL-3848 reinstate Fetch DB References submenu tree | commitdiff
2021-07-25 Jim ProcterJAL-3848 add compbio and jalview to direct connection... tree | commitdiff
2021-07-22 Jim ProcterJAL-3671 hardwire log4j.root logger to INFO to supress... tree | commitdiff
2021-07-22 Jim ProcterJAL-3848 enable slivka services dialog in JalviewJS tree | commitdiff
2021-07-22 Jim ProcterJAL-3853 JAL-1870 toggle to enable/disable posterior... tree | commitdiff
2021-07-22 Jim ProcterJAL-3853 JAL-1870 patch tests for annotation colour... tree | commitdiff
2021-07-22 Jim ProcterJAL-3853 patch sequence annotation report code and... tree | commitdiff
2021-07-22 Jim ProcterJAL-3848 ensure annotation from a service gets a calcId... tree | commitdiff
2021-07-22 Jim ProcterJAL-3848 don’t include sequence limits in sequence... tree | commitdiff
2021-07-21 Mateusz WarownyJAL-3848 print exception for failed align jobs tree | commitdiff
2021-07-09 Mateusz WarownyMerge branch 'jpred-fix' into bug/JAL-3807_jpred-with... bug/JAL-3807_jpred-with-slivka tree | commitdiff
2021-07-09 Mateusz WarownyJAL-3807 Fix SlivkaWSInstance not fetching alignments. tree | commitdiff
2021-07-09 Mateusz WarownyMerge branch 'bug/JAL-3849_aacon-parameters' into impro... tree | commitdiff
2021-07-09 Mateusz WarownyJAL-3690 Remove references to old AlignCalcManager. bug/JAL-3849_aacon-parameters tree | commitdiff
2021-07-08 Mateusz WarownyJAL-3848 SlivkaParamSet: reformat code and add service... tree | commitdiff
2021-07-08 Mateusz WarownyJAL-3848 Update slivka client library. tree | commitdiff
2021-07-08 Mateusz WarownyJAL-3849 Remove join() which blocked the ui. tree | commitdiff
2021-02-22 Mateusz WarownyJAL-3807 - Add single sequence capabilities to jws2... tree | commitdiff
2021-02-22 Mateusz WarownyJAL-3807 - Move new JPred client to the jws2 package. tree | commitdiff
2021-02-22 Mateusz WarownyJAL-3807 - Re-implement results processing. tree | commitdiff
2021-02-22 MateuszJAL-3807 JPred can now successfully submit and track... tree | commitdiff
2021-02-22 Mateusz WarownyMerge branch 'bug/JAL-3809_ws_params_dialog_fix' into... tree | commitdiff
2021-02-22 Mateusz WarownyMerge branch 'bug/JAL-3810_annotation_ws_stopping_abrup... bug/JAL-3809_ws_params_dialog_fix tree | commitdiff
2021-02-22 Mateusz WarownyJAL-3809 - Fixed param edit dialog for jalviewjs. tree | commitdiff
2021-02-22 Mateusz WarownyMerge branch 'feature/JAL-3690_callback-based-web-servi... tree | commitdiff
2021-02-22 MateuszMerge branch 'feature/JAL-3690_callback-based-web-servi... tree | commitdiff
2021-02-05 Mateusz WarownyJAL-3810 - Add trace method to javascript implementatio... bug/JAL-3810_annotation_ws_stopping_abruptly tree | commitdiff
2021-02-05 Mateusz WarownyJAL-3810 - Replace log.trace() calls with log.debug() tree | commitdiff
2021-01-27 MateuszJAL-3690 Introduce AlignCalcManager2 tests. feature/JAL-3690_callback-based-web-services tree | commitdiff
2021-01-22 MateuszJAL-3690 AlignCalcManager - add full support for onesho... tree | commitdiff
2021-01-22 MateuszJAL-3690 AACon ws menu entry fix. tree | commitdiff
2021-01-22 MateuszJAL-3690 Allow unregistered workers to be run with... tree | commitdiff
2021-01-22 MateuszJAL-3690 Fix typo in enum name in slivka client. tree | commitdiff
2021-01-22 MateuszJAL-3690 Fixed slivka wsmenu categories. tree | commitdiff
2020-12-18 Jim ProcterJAL-3690 recoded AWSThread to use javax.swing.Timer... merge/Jalview-JS/develop_feature/JAL-3690_callback-based-web-services tree | commitdiff
2020-12-17 Jim ProcterJAL-3690 patch out use of java.streams/spliterator... tree | commitdiff
2020-12-15 Jim ProcterJAL-3690 patch out need for java.time in j2s (see https... tree | commitdiff
2020-12-15 Jim ProcterJAL-3690 patch out spinning animation for web service... tree | commitdiff
2020-12-14 Jim ProcterMerge branch 'Jalview-JS/develop' into merge_js_develop tree | commitdiff
2020-12-11 MateuszJAL-3690 Let's enable web services (seriously this... tree | commitdiff
2020-11-27 Mateusz WaronwyJAL-3690 List.copyOf() workaround tree | commitdiff
2020-11-13 Mateusz WaronwyJAL-3690 separate startup and poll code in SeqAnnotatio... tree | commitdiff
2020-11-12 Mateusz WaronwyJAL-3690 - fixed state inconsistency when restarting... tree | commitdiff
2020-11-11 Mateusz WaronwyJAL-3690 partially reworked AlignCalcManager tree | commitdiff
2020-10-26 Mateusz WaronwyJAL-3690 - introduce shutdown method that cleans up... tree | commitdiff
2020-10-21 Mateusz WaronwyJAL-3690 Documentation for AlignCalcListener tree | commitdiff
2020-10-21 Mateusz WaronwyJAL-3690 Catch and notify about worker cancellation... tree | commitdiff
2020-10-21 Mateusz WaronwyJAL-3690 Fix concurrent modification exception when... tree | commitdiff
2020-10-21 Mateusz WaronwyJAL-3690 Documentation for AlignCalcManagerI2 tree | commitdiff
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