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Merge branch 'develop' into bug/JAL-2837
[jalview.git] / src /
2017-11-17 kiramtMerge branch 'develop' into bug/JAL-2837 bug/JAL-2837 tree | commitdiff
2017-11-17 kiramtMerge branch 'develop' into bug/JAL-2837 tree | commitdiff
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2831' into develop tree | commitdiff
2017-11-16 Jim ProcterMerge branch 'bug/JAL-2829deleteCharsWithGaps' into... tree | commitdiff
2017-11-16 kiramtJAL-2831 Removed unwanted hidden sequences checks bug/JAL-2831 tree | commitdiff
2017-11-15 kiramtJAL-2831 Don't show cursor if position in hidden region tree | commitdiff
2017-11-15 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 tree | commitdiff
2017-11-15 kiramtJAL-2811 Updated following review bug/JAL-2811 tree | commitdiff
2017-11-15 kiramtJAL-2840 fix wrapped scrolling when using cursor at... tree | commitdiff
2017-11-15 kiramtJAL-2834 JAL-2836 temporarily disabled wrapped mode... tree | commitdiff
2017-11-15 kiramtJAL-2831 ported to applet tree | commitdiff
2017-11-14 kiramtJAL-2831 tidies and tests tree | commitdiff
2017-11-14 kiramtJAL-2831 tidy tree | commitdiff
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 tree | commitdiff
2017-11-14 kiramtJAL-2811 Changed to overlay on via graphics context... tree | commitdiff
2017-11-14 kiramtJAL-2811 Missed commit tree | commitdiff
2017-11-14 kiramtJAL-2811 Made it work for hidden columns/seqs too tree | commitdiff
2017-11-14 kiramtJAL-2831 Attempt at cursor fix for wrapped mode tree | commitdiff
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 tree | commitdiff
2017-11-14 kiramtJAL-2831 deal with hidden cols and seqs in new cursor... tree | commitdiff
2017-11-14 kiramtJAL-2831 Added move viewport event and set up cursor... tree | commitdiff
2017-11-14 kiramtMerge branch 'imp/JAL-2774' into bug/JAL-2831 tree | commitdiff
2017-11-13 kiramtJAL-2811 Tidy tree | commitdiff
2017-11-13 Jim ProcterMerge branch 'features/JAL-2758_shorteruniprot' into... tree | commitdiff
2017-11-13 Jim ProcterJAL-2758 remove configurable behaviour - Uniprot sequen... tree | commitdiff
2017-11-13 Jim ProcterJAL-2758 typo tree | commitdiff
2017-11-13 kiramtJAl-2811 Working for wrapped panels too tree | commitdiff
2017-11-13 kiramtJAL-2811 Add layer for cursor in SeqCanvas tree | commitdiff
2017-11-13 Jim ProcterMerge branch 'imp/JAL-2810_ftsIDtab' into develop tree | commitdiff
2017-11-13 gmungocJAL-2176 removed unused Sequence.index tree | commitdiff
2017-11-13 Jim ProcterJAL-2810 auto search checkbox state stored as user... tree | commitdiff
2017-11-13 gmungocJAL-2679 example accession changed to CAD01290 tree | commitdiff
2017-11-13 Jim ProcterJAL-2810 mainFramTabs -> tabs tree | commitdiff
2017-11-10 gmungocJAL-2829 fixes and unit tests bug/JAL-2829deleteCharsWithGaps tree | commitdiff
2017-11-10 gmungocJAL-2562 updated findPosition javadoc to match behaviour tree | commitdiff
2017-11-08 Jim ProcterMerge branch 'develop' into bug/JAL-2225mapMultipleChains tree | commitdiff
2017-11-07 Jim ProcterMerge branch 'imp/JAL-2775' into develop tree | commitdiff
2017-11-07 Jim ProcterJAL-2810 i18n tab label tree | commitdiff
2017-11-07 kiramtJAL-2774 Added javadoc for new event parameters imp/JAL-2774 tree | commitdiff
2017-11-07 Jim ProcterJAL-2810 ‘Close’ is now ‘Cancel’ in SequenceFetcher... tree | commitdiff
2017-11-07 Jim ProcterJAL-2810 working back button shown for bulk ID retrieva... tree | commitdiff
2017-11-07 kiramtJAL-2774 Fix fastpaint of wrapped alignment tree | commitdiff
2017-11-07 Jim ProcterJAL-2810 bulk fetch for PDB IDs tree | commitdiff
2017-11-01 kiramtMerge branch 'develop' into imp/JAL-2775 imp/JAL-2775 tree | commitdiff
2017-10-31 kiramtJAL-2774 Fix repaint artefacts tree | commitdiff
2017-10-31 kiramtJAL-2774 Fixed merge issues tree | commitdiff
2017-10-31 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-10-31 Jim ProcterJAL-2810 checkbox label for Autosearch tree | commitdiff
2017-10-31 Jim ProcterJAL-2810 default border colour tree | commitdiff
2017-10-31 kiramtJAL-2756 update for new EBI https link tree | commitdiff
2017-10-27 Jim ProcterJAL-2810 prototype retrieve ID tab for the Uniprot... tree | commitdiff
2017-10-27 Jim ProcterJAL-2804 update search results when enter pressed or... tree | commitdiff
2017-10-27 Jim ProcterJAL-2804 checkbox to enable/disable auto search (with... tree | commitdiff
2017-10-27 Jim ProcterJAL-2804 kludge method to test if last key event handle... tree | commitdiff
2017-10-27 gmungocJAL-2526 updated javadoc tree | commitdiff
2017-10-26 Jim ProcterJAL-2488 patch causes of NPE during testStoreAndRecover... tree | commitdiff
2017-10-26 Jim ProcterMerge branch 'feature/JAL-2488finalize' into develop tree | commitdiff
2017-10-26 Jim ProcterJAL-2793 cancelling font changed dialog didn't call... tree | commitdiff
2017-10-26 Jim ProcterMerge branch 'bug/JAL-2776toggleGroupColour' into develop tree | commitdiff
2017-10-26 Jim ProcterMerge branch 'features/JAL-2685pairwiseSeqLimits' into... tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2617mappedStopCodon' into develop tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2667mouseWheelWrapped' into develop tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2727closeAllFreeMemory' into... tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bugs/JAL-2779_osx_dialogsequencingbroke... tree | commitdiff
2017-10-25 Jim ProcterJAL-2779 remove empty block and if statement tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2392_deadlockonpdbdisplay' into... tree | commitdiff
2017-10-25 Jim ProcterJAL-2790 provide a cancel button for JABAWS and AACon... tree | commitdiff
2017-10-25 Jim ProcterJAL-2392 auto boxing rather than explicit Long as key tree | commitdiff
2017-10-24 gmungocJAL-2495 highlight all mapped sequences from structure... tree | commitdiff
2017-10-24 Jim ProcterMerge branch 'features/JAL-2608closeOverview' into... tree | commitdiff
2017-10-24 gmungocJAL-2788 corrected merge error in propertyChange tree | commitdiff
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2609attemptedmerge' into develop tree | commitdiff
2017-10-23 Jim ProcterJAL-2609 remove unused AlignPanel.fastPaint flag and... tree | commitdiff
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2609attemptedmerge' into develop tree | commitdiff
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2739' into develop tree | commitdiff
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2682parseId' into develop tree | commitdiff
2017-10-23 gmungocJAL-2776 repaint everything on toggle group colour bug/JAL-2776toggleGroupColour tree | commitdiff
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2253' into develop tree | commitdiff
2017-10-23 gmungocJAL-1854 keep fallthrough but with comment to suppress... tree | commitdiff
2017-10-23 gmungocJAL-1854 remove fallthrough of switch case (Checkstyle... tree | commitdiff
2017-10-20 Jim ProcterJAL-2779 keep a reference to original Aqua manager... tree | commitdiff
2017-10-20 Jim ProcterJAL-2779 remove OSX platform specific import (not neede... tree | commitdiff
2017-10-20 gmungocJAL-2253 pull up constant, additional unit test bug/JAL-2253 tree | commitdiff
2017-10-20 gmungocJAL-2609 fully erase scale above, tidy code change tree | commitdiff
2017-10-19 gmungocJAL-2609 adjustments for test findings tree | commitdiff
2017-10-19 kiramtMerge branch 'develop' into bug/JAL-2609attemptedmerge tree | commitdiff
2017-10-18 Jim ProcterJAL-2779 switch order for updating the current alignmen... tree | commitdiff
2017-10-18 Jim ProcterJAL-2779 remove dead code tree | commitdiff
2017-10-18 Jim ProcterJAL-2779 hook in our own AquaInternalFrameManager when... tree | commitdiff
2017-10-18 Jim ProcterJAL-2779 JAL-1551 source formatting tree | commitdiff
2017-10-18 Jim ProcterJAL-2779 patch so closing most recent frame doesn’t... tree | commitdiff
2017-10-18 Jim ProcterJAL-2779 original version of AquaInternalFrame Manager tree | commitdiff
2017-10-18 Jim ProcterJAL-2782 remark about possible exception due to unsafe... tree | commitdiff
2017-10-18 Jim ProcterMerge branch 'bugs/JAL-2777_whitespaceChain' into develop tree | commitdiff
2017-10-18 Jim ProcterJAL-2777 remove duplicate code outside conditional... tree | commitdiff
2017-10-17 Jim ProcterJAL-2773 renamed flags for clarity tree | commitdiff
2017-10-17 Jim ProcterJAL-2777 patch for whitespace chain bugs/JAL-2777_whitespaceChain tree | commitdiff
2017-10-17 Jim ProcterJAL-2481 patch to fix findFeatureColour for end-of... tree | commitdiff
2017-10-17 Jim ProcterJAL-2777 noticed exception raised on construction of... tree | commitdiff
2017-10-16 kiramtJAL-2775 added repaint clipping tree | commitdiff
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