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2017-07-11	kiramt	JAL-2588 (and JAL-2610, JAL-2603) mid refactor	commit \| commitdiff \| tree
2017-06-28	kiramt	JAL-2603 Putative fix	commit \| commitdiff \| tree
2017-06-28	kiramt	Merge remote-tracking branch 'origin/develop' into...	commit \| commitdiff \| tree
2017-06-28	kiramt	JAL-2588 Gap colour scheme now shown in overview	commit \| commitdiff \| tree
2017-06-15	kiramt	Merge remote-tracking branch 'origin/develop' into...	commit \| commitdiff \| tree
2017-06-12	kiramt	JAL-2591 Updates following code review	commit \| commitdiff \| tree
2017-06-08	kiramt	JAL-2588 Consistent gap colour when in None colour...	commit \| commitdiff \| tree
2017-06-08	kiramt	Merge branch 'bug/JAL-2589gapColour' into feature/2588	commit \| commitdiff \| tree
2017-06-08	kiramt	Merge branch 'bug/JAL-2586' into develop	commit \| commitdiff \| tree
2017-06-08	kiramt	JAL-2586 Clarification to URL link code	commit \| commitdiff \| tree
2017-06-08	kiramt	JAL-2591 made redraw volatile	commit \| commitdiff \| tree
2017-06-08	kiramt	JAL-2591 Refactor HiddenColumns to use ArrayList instead...	commit \| commitdiff \| tree
2017-06-08	kiramt	JAL-2591 More HiddenColumns refactoring. Tests passing.	commit \| commitdiff \| tree
2017-06-07	kiramt	JAL-2591 Further refactoring (still incomplete)	commit \| commitdiff \| tree
2017-06-07	kiramt	JAL-2591 More refactoring (incomplete)	commit \| commitdiff \| tree
2017-06-07	kiramt	JAL-2591 Hidden columns regions can be output to string...	commit \| commitdiff \| tree
2017-06-07	kiramt	JAL-2591 updated HiddenColumns::findHiddenRegionPositions...	commit \| commitdiff \| tree
2017-06-07	kiramt	JAL-2591 Overview changes ported to applet	commit \| commitdiff \| tree
2017-06-07	kiramt	JAL-2591 More rationalising of hiddencols	commit \| commitdiff \| tree
2017-06-07	kiramt	JAL-2591 Increased granularity of overview panel update...	commit \| commitdiff \| tree
2017-06-07	kiramt	JAL-2591 simplifying hidden columns usage	commit \| commitdiff \| tree
2017-06-06	kiramt	JAL-2591 Removed getHiddenRegions()==null checks which...	commit \| commitdiff \| tree
2017-06-06	kiramt	JAL-2591 Added readwrite locking on HiddenColumns	commit \| commitdiff \| tree
2017-06-06	kiramt	Merge remote-tracking branch 'origin/bug/JAL-2576'...	commit \| commitdiff \| tree
2017-06-05	kiramt	JAL-2588 Naive implementation of gaps as grey in overview	commit \| commitdiff \| tree
2017-06-05	kiramt	JAL-2586 Checkstyle flagged fix of unintended fall...	commit \| commitdiff \| tree
2017-06-05	kiramt	JAL-2571 Missed (alwaysRun=true) for @BeforeMethod	commit \| commitdiff \| tree
2017-06-02	kiramt	JAL-2576 Proposed fix	commit \| commitdiff \| tree
2017-06-02	kiramt	JAL-2577 Don't allow viewport ranges below 0. Unit...	commit \| commitdiff \| tree
2017-06-02	kiramt	JAL-2578 Moved hidden columns reveal to before selection...	commit \| commitdiff \| tree
2017-05-30	kiramt	JAL-2573 Fixes for alignment < viewport width, and...	commit \| commitdiff \| tree
2017-05-30	kiramt	JAL-2571 Corrected alignment width/height checks to...	commit \| commitdiff \| tree
2017-05-26	kiramt	JAL-2491 Missed port to applet from JAL-1691	commit \| commitdiff \| tree
2017-05-25	kiramt	JAl-2034 Ported to applet	commit \| commitdiff \| tree
2017-05-25	kiramt	JAL-2034 don't update overview after click without...	commit \| commitdiff \| tree
2017-05-25	kiramt	Merge branch 'bug/JAL-2551' into bug/JAL-2034contextchange	commit \| commitdiff \| tree
2017-05-24	kiramt	JAL-2551 Fix to group colouring when group extent is...	commit \| commitdiff \| tree
2017-05-24	kiramt	JAL-2034 Added isDefined flag to SequenceGroup	commit \| commitdiff \| tree
2017-05-22	kiramt	Merge remote-tracking branch 'origin/bug/JAL-2256'...	commit \| commitdiff \| tree
2017-05-18	kiramt	JAL-2256 Corrected AllCols/Rows iterator behaviour...	commit \| commitdiff \| tree
2017-05-16	kiramt	JAL-2536 Overview window sizing not subject to min...	commit \| commitdiff \| tree
2017-05-16	kiramt	JAL-2522 Missed fix to applet	commit \| commitdiff \| tree
2017-05-16	kiramt	JAL-2388 Rationalised hashCode method in HiddenColumns	commit \| commitdiff \| tree
2017-05-16	kiramt	Merge branch 'develop' into bug/JAL-2491	commit \| commitdiff \| tree
2017-05-16	kiramt	JAL-2491 Better merge	commit \| commitdiff \| tree
2017-05-15	kiramt	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2017-05-15	kiramt	JAL-2388 Add missed optimisation	commit \| commitdiff \| tree
2017-05-15	kiramt	JAL-2491 Better merge but not quite right yet	commit \| commitdiff \| tree
2017-05-15	kiramt	Merge remote-tracking branch 'origin/develop' into...	commit \| commitdiff \| tree
2017-05-15	kiramt	JAL-2491 Tests	commit \| commitdiff \| tree
2017-05-15	kiramt	JAL-2491 Tidies	commit \| commitdiff \| tree
2017-05-12	kiramt	JAL-2491 Tidy	commit \| commitdiff \| tree
2017-05-12	kiramt	JAL-2491 Tidies to Overview panel calls in light of...	commit \| commitdiff \| tree
2017-05-12	kiramt	JAL-2491 Renamed comp scrolling flag for consistency...	commit \| commitdiff \| tree
2017-05-12	kiramt	JAL-2491 Added adjustment methods to be called directly	commit \| commitdiff \| tree
2017-05-12	kiramt	JAL-2491 Unit test updates	commit \| commitdiff \| tree
2017-05-12	kiramt	JAL-2491 Tweaks for applet	commit \| commitdiff \| tree
2017-05-11	kiramt	JAL-2491 First port to applet	commit \| commitdiff \| tree
2017-05-11	kiramt	JAL-2491 First port to applet	commit \| commitdiff \| tree
2017-05-11	kiramt	JAL-2491 Unit tests and updates	commit \| commitdiff \| tree
2017-05-10	kiramt	JAL-2491 Make it work with cursor movement	commit \| commitdiff \| tree
2017-05-10	kiramt	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2017-05-10	kiramt	JAL-2522 Fix to cursor scrolling	commit \| commitdiff \| tree
2017-05-10	kiramt	JAL-2491 Cursor scrolling	commit \| commitdiff \| tree
2017-05-09	kiramt	JAL-2491 Tidies and more refactoring	commit \| commitdiff \| tree
2017-05-09	kiramt	JAL-2491 Resolved highlighting and initialisation problems	commit \| commitdiff \| tree
2017-05-09	kiramt	JAL-2388 Added checkbox to toggle hidden columns menu...	commit \| commitdiff \| tree
2017-05-08	kiramt	JAL-2491 More wrap corrections	commit \| commitdiff \| tree
2017-05-08	kiramt	JAL-2491 Tweaks to avoid scroll problems at bottom...	commit \| commitdiff \| tree
2017-05-08	kiramt	JAL-2515 Id panel in applet updated for NPE on urlProvider	commit \| commitdiff \| tree
2017-05-08	kiramt	JAL-2512 And corresponding test	commit \| commitdiff \| tree
2017-05-08	kiramt	JAL-2512 And applet	commit \| commitdiff \| tree
2017-05-08	kiramt	JAL-2512 Fix to show non-gap positions in None colour...	commit \| commitdiff \| tree
2017-05-08	kiramt	JAL-2491 Started moving other scrolling fns into viewportranges	commit \| commitdiff \| tree
2017-05-05	kiramt	Merge remote-tracking branch	commit \| commitdiff \| tree
2017-05-05	kiramt	JAL-2491 Scrolling and interaction with overview/find...	commit \| commitdiff \| tree
2017-05-05	kiramt	Merge remote-tracking branch 'origin/develop' into	commit \| commitdiff \| tree
2017-05-05	kiramt	Merge remote-tracking branch 'origin/develop' into	commit \| commitdiff \| tree
2017-05-05	kiramt	JAL-2491 More working split panel + new scrolling	commit \| commitdiff \| tree
2017-05-03	kiramt	JAL-2491 Tidies	commit \| commitdiff \| tree
2017-05-03	kiramt	JAL-2491 Wrapped panel scrolling	commit \| commitdiff \| tree
2017-05-03	kiramt	JAL-2491 sort of working overview/find interaction...	commit \| commitdiff \| tree
2017-05-02	kiramt	JAL-2491 first addition of new event	commit \| commitdiff \| tree
2017-04-26	kiramt	Merge remote-tracking branch 'origin/features/JAL-2388hidden...	commit \| commitdiff \| tree
2017-04-26	kiramt	JAL-2388 Update to hidden columns/column selection...	commit \| commitdiff \| tree
2017-04-26	kiramt	Merge remote-tracking branch 'origin/develop' into...	commit \| commitdiff \| tree
2017-04-26	kiramt	Merge remote-tracking branch 'origin/develop' into...	commit \| commitdiff \| tree
2017-04-26	kiramt	Merge remote-tracking branch 'origin/features/JAL-2388hidden...	commit \| commitdiff \| tree
2017-04-26	kiramt	JAL-2388 last separation of hidden columns/col selection	commit \| commitdiff \| tree
2017-04-26	kiramt	JAL-2388 Tidies and unit tests	commit \| commitdiff \| tree
2017-04-25	kiramt	JAL-2388 Missed file from previous commit	commit \| commitdiff \| tree
2017-04-25	kiramt	JAL-2388 Reverted and re-did applet changes	commit \| commitdiff \| tree
2017-04-25	kiramt	JAL-2388 Tidies and other corrections so applet compiles	commit \| commitdiff \| tree
2017-04-25	kiramt	JAL-2388 And corrected OverviewCanvas for applet	commit \| commitdiff \| tree
2017-04-25	kiramt	JAL-2388 Updated applet to show/hide hidden regions...	commit \| commitdiff \| tree
2017-04-25	kiramt	JAL-2388 Working hidden regions hide/show in desktop	commit \| commitdiff \| tree
2017-04-24	kiramt	Merge remote-tracking branch	commit \| commitdiff \| tree
2017-04-24	kiramt	Merge remote-tracking branch 'origin/develop' into...	commit \| commitdiff \| tree
2017-04-24	kiramt	Merge remote-tracking branch 'origin/develop' into...	commit \| commitdiff \| tree
2017-04-24	kiramt	JAL-2388 Finished split of hidden columns and selected...	commit \| commitdiff \| tree
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