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JAL-3878 Annotation comments and questions
2021-10-20 Mateusz WarownyJAL-3878 Annotation comments and questions
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2021-10-19 Mateusz WarownyJAL-3878 Add annotation operations to slivka discoverer.
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2021-10-19 Mateusz WarownyJAL-3878 Fix sequences not being gathered when submitting...
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2021-10-19 Mateusz WarownyJAL-3878 Rename annotation provider method to getAnnotations
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2021-10-19 Mateusz WarownyJAL-3878 Set job status to cancelled on job cancellation.
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2021-10-19 Mateusz WarownyJAL-3878 Start interactive job by registering them...
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2021-10-19 Mateusz WarownyJAL-3878 Fix progress updater bar to account for cancelled...
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2021-10-19 Mateusz WarownyJAL-3878 Refactoring SeqAnnotationServiceCalcWorker.
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2021-10-13 Mateusz WarownyJAL-3878 Add getCalcName to AlignCalcWorkerI.
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2021-10-13 Mateusz WarownyJAL-3878 Rename web service worker to more generic...
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2021-10-09 Mateusz WarownyUpdate annotation operation WIP
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2021-10-07 Mateusz WarownyJAL-3878 Add dataset and viewport arguments to ResultSupplier.
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2021-10-05 Mateusz WarownyJAL-3878 Annotation operation skeleton.
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2021-10-01 Mateusz WarownyJAL-3878 Fix workers done condition to account for...
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2021-09-30 Mateusz WarownyJAL-3878 Skip getting results of failed jobs.
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2021-09-30 Mateusz WarownyJAL-3878 Add job log messages reporting.
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2021-09-30 Mateusz WarownyJAL-3878 Fix null pointer exception when preparing...
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2021-09-30 Mateusz WarownyJAL-3878 Fetch sequences for alignment on menu action...
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2021-09-30 Mateusz WarownyJAL-3878 Split web services menu entries by programs...
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2021-09-29 Mateusz WarownyJAL-3878 Add isInteractive() method to Operation interface.
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2021-09-29 Mateusz WarownyJAL-3878 Add getName() to Operation interface.
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2021-09-27 Mateusz WarownyJAL-3878 Wire web services logic to UI elements.
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2021-09-24 Mateusz WarownyJAL-3878 Fire service changed event after discovery...
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2021-09-24 Mateusz WarownyJAL-3878 Fix incorrect value of isRunning in SlivkaWSDiscoverer
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2021-09-24 Mateusz WarownyJAL-3878 Move operation type from WebService to Operation.
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2021-09-24 Mateusz WarownyJAL-3878 Code reformatting.
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2021-09-24 Mateusz WarownyJAL-3878 Display results of completed alignment job
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2021-09-24 Mateusz WarownyJAL-3878 Change SERVER_ERROR.isSubmitted to false.
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2021-09-24 Mateusz WarownyJAL-3878 Move WSJob instantiation out of WebService...
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2021-09-20 Mateusz WarownyJAL-3878 Implement AlignmentOperation WIP
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2021-09-20 Mateusz WarownyJAL-3878 Create interface for web service operations
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2021-09-20 Mateusz WarownyJAL-3878 Implement slivka web service and discoverer.
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2021-09-20 Mateusz WarownyJAL-3878 Add web service executor class and instantiate...
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2021-09-20 Mateusz WarownyJAL-3878 Create base interfaces for new web services.
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2021-09-20 Mateusz WarownyJAL-3878 Remove throws declaration from param store...
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2021-09-20 Mateusz WarownyJAL-3878 Create Slivka Web Service adapter.
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2021-09-20 Mateusz WarownyJAL-3878 Initial preparation.
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2021-07-29 Mateusz WarownyMerge branch 'improvement/JAL-3848_slivka_0.8' into...
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2021-07-27 Mateusz WarownyMerge branch 'bug/JAL-3807_jpred-with-slivka' into...
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2021-07-27 Mateusz WarownyMerge commit '0b438477b16470202bddfecb54e0587036b37202...
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2021-07-27 Mateusz WarownyJAL-3066 Fix NullPointerException thrown when showing...
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2021-07-23 Mateusz WarownyJAL-3848 Update slivka client javajs library.
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2021-07-21 Mateusz WarownyJAL-3848 print exception for failed align jobs
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2021-07-21 Mateusz WarownyJAL-3848 add latest slivka-client fixes.
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2021-07-09 Mateusz WarownyMerge branch 'jpred-fix' into bug/JAL-3807_jpred-with...
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2021-07-09 Mateusz WarownyJAL-3807 Fix SlivkaWSInstance not fetching alignments.
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2021-07-09 Mateusz WarownyMerge branch 'bug/JAL-3849_aacon-parameters' into improvemen...
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2021-07-09 Mateusz WarownyJAL-3690 Remove references to old AlignCalcManager.
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2021-07-08 Mateusz WarownyJAL-3848 SlivkaParamSet: reformat code and add service...
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2021-07-08 Mateusz WarownyJAL-3848 Update slivka client library.
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2021-07-08 Mateusz WarownyJAL-3849 Remove join() which blocked the ui.
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2021-02-22 Mateusz WarownyJAL-3807 - Add single sequence capabilities to jws2...
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2021-02-22 Mateusz WarownyJAL-3807 - Move new JPred client to the jws2 package.
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2021-02-22 Mateusz WarownyJAL-3807 - Re-implement results processing.
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2021-02-22 MateuszJAL-3807 JPred can now successfully submit and track...
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2021-02-22 Mateusz WarownyMerge branch 'bug/JAL-3809_ws_params_dialog_fix' into...
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2021-02-22 Mateusz WarownyMerge branch 'bug/JAL-3810_annotation_ws_stopping_abruptly...
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2021-02-22 Mateusz WarownyJAL-3809 - Fixed param edit dialog for jalviewjs.
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2021-02-22 Mateusz WarownyMerge branch 'feature/JAL-3690_callback-based-web-services...
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2021-02-22 MateuszMerge branch 'feature/JAL-3690_callback-based-web-services...
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2021-02-05 Mateusz WarownyJAL-3810 - Add trace method to javascript implementation...
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2021-02-05 Mateusz WarownyJAL-3810 - Replace log.trace() calls with log.debug()
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2020-07-22 Mateusz WarownyJAL-3690 changed AWSThread to use Timer instead
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2020-07-20 Mateusz WarownyJAL-3690 alternative servers menu fix
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2020-07-17 Mateusz WarownyJAL-3690 restore jws1 JPred
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2020-07-16 Mateusz WarownyJAL-3690 switching to CompletableFuture to allow chaining
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2020-07-15 Mateusz WarownyJAL-3690 mark JalviewChangeSupport as deprecated
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2020-07-15 Mateusz WarownyJAL-3690 refactoring web-services discovery
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2020-07-09 Mateusz WarownyMerge branch 'feature/JAL-3686_slivka_client_js_update...
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2020-07-09 Mateusz WarownyMerge branch 'feature/JAL-3686_slivka_client_js_update...
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2020-07-08 Mateusz WarownyJAL-3683 retrieve job status to output stream
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2020-07-08 Mateusz WarownyJAL-6386 update slivka client for j2s compatibility
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2020-07-08 Mateusz WarownyMerge branch 'feature/JAL-3515-slivka-preferences'...
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2019-10-17 Mateusz WarownyJAL-3066 Slivka client update for changed api endpoints.
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2019-10-11 Mateusz WarownyJAL-3066 Create labels for fields and hack it to work...
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2019-10-11 Mateusz WarownyMerge remote-tracking branch 'origin/tasks/JAL-3070_wsinterf...
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2019-10-11 Mateusz WarownyJAL-3066 change service type naming to avoid menu entry...
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2019-10-09 Mateusz WarownyJAL-3066 Read parameters directly from args list allowing...
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2019-10-09 Mateusz WarownyUpdate slivka-client library: multiple form field values.
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2019-10-09 Mateusz WarownyJAL-3066 Fix log files retrieval.
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2019-10-07 Mateusz WarownyJal-3066 Retrieve job log and error log from the server.
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2019-10-07 Jim ProcterRevert "JAL-3070 JAL-3066 fix initialisation of slivka...
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2019-10-07 Mateusz WarownyJAL-3066 AACon: pass the instance name of the service...
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2019-10-07 Mateusz WarownyJAL-3066 Check if annotation and features are present...
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2019-10-07 Mateusz WarownyMerge remote-tracking branch 'origin/tasks/JAL-3070_wsinterf...
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2019-10-04 Mateusz WarownyMerge remote-tracking branch 'origin/tasks/JAL-3070_wsinterf...
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2019-10-01 Mateusz WarownyJAL-3066 Sequence annotation services.
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2019-09-27 Mateusz WarownyJAL-3066 Automatically discoverable Protein sequence...
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2019-09-27 Mateusz WarownyMerge remote-tracking branch 'origin/tasks/JAL-3070_wsinterf...
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2019-09-23 Mateusz WarownyJAL-3066 Annotation Service Instance stub
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2019-09-23 Mateusz WarownySlivkaWSDiscoverer formatting fix
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2019-09-23 Mateusz WarownyJAL-3066 Move common web service methods to abstract...
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2019-09-19 Mateusz WarownyJAL-3066 Auto discover multiple sequence alignment...
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2019-09-16 Mateusz WarownySet the initial value of the choice field to the default...
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2019-09-16 Mateusz WarownyAdd the remaining msa services to the Discoverer
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2019-09-11 Mateusz WarownyChange choice field to use dropbox instead of radio...
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2019-09-11 Mateusz WarownyCreate generic msa service instance
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2019-09-06 Mateusz WarownyMerge remote-tracking branch 'origin/alpha/JAL-3066_Jalview_...
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2019-09-06 Mateusz WarownyJAL-3066 Working custom parameters for clustalo
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2019-09-06 Mateusz WarownyJAL-1426 Replacing old apache-http jars.
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