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Merge branch 'alpha/JAL-3899_deuniquify_refactor' into alpha/JAL-3066_Jalview_212_sli...
2021-11-16 Mateusz WarownyMerge branch 'alpha/JAL-3899_deuniquify_refactor' into...
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2021-10-07 Mateusz WarownyJAL-3899 Replace prints with logger messages.
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2021-10-06 Mateusz WarownyJAL-3899 Update usages of uniquify and deuniquify.
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2021-10-06 Mateusz WarownyJAL-3899 Refactor sequence de/uniquification.
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2021-07-29 Mateusz WarownyMerge branch 'improvement/JAL-3848_slivka_0.8' into...
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2021-07-27 Mateusz WarownyMerge branch 'bug/JAL-3807_jpred-with-slivka' into...
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2021-07-27 Mateusz WarownyMerge commit '0b438477b16470202bddfecb54e0587036b37202...
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2021-07-27 Mateusz WarownyJAL-3066 Fix NullPointerException thrown when showing...
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2021-07-23 Mateusz WarownyJAL-3848 Update slivka client javajs library.
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2021-07-21 Mateusz WarownyJAL-3848 print exception for failed align jobs
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2021-07-21 Mateusz WarownyJAL-3848 add latest slivka-client fixes.
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2021-07-09 Mateusz WarownyMerge branch 'jpred-fix' into bug/JAL-3807_jpred-with...
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2021-07-09 Mateusz WarownyJAL-3807 Fix SlivkaWSInstance not fetching alignments.
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2021-07-09 Mateusz WarownyMerge branch 'bug/JAL-3849_aacon-parameters' into improvemen...
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2021-07-09 Mateusz WarownyJAL-3690 Remove references to old AlignCalcManager.
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2021-07-08 Mateusz WarownyJAL-3848 SlivkaParamSet: reformat code and add service...
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2021-07-08 Mateusz WarownyJAL-3848 Update slivka client library.
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2021-07-08 Mateusz WarownyJAL-3849 Remove join() which blocked the ui.
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2021-02-22 Mateusz WarownyJAL-3807 - Add single sequence capabilities to jws2...
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2021-02-22 Mateusz WarownyJAL-3807 - Move new JPred client to the jws2 package.
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2021-02-22 Mateusz WarownyJAL-3807 - Re-implement results processing.
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2021-02-22 MateuszJAL-3807 JPred can now successfully submit and track...
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2021-02-22 Mateusz WarownyMerge branch 'bug/JAL-3809_ws_params_dialog_fix' into...
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2021-02-22 Mateusz WarownyMerge branch 'bug/JAL-3810_annotation_ws_stopping_abruptly...
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2021-02-22 Mateusz WarownyJAL-3809 - Fixed param edit dialog for jalviewjs.
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2021-02-22 Mateusz WarownyMerge branch 'feature/JAL-3690_callback-based-web-services...
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2021-02-22 MateuszMerge branch 'feature/JAL-3690_callback-based-web-services...
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2021-02-05 Mateusz WarownyJAL-3810 - Add trace method to javascript implementation...
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2021-02-05 Mateusz WarownyJAL-3810 - Replace log.trace() calls with log.debug()
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2021-01-27 MateuszJAL-3690 Introduce AlignCalcManager2 tests.
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2021-01-22 MateuszMerge branch 'Jalview-JS/develop' into feature/JAL...
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2021-01-22 MateuszJAL-3690 AlignCalcManager - add full support for oneshot...
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2021-01-22 MateuszJAL-3690 AACon ws menu entry fix.
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2021-01-22 MateuszJAL-3690 Allow unregistered workers to be run with...
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2021-01-22 MateuszJAL-3690 Fix typo in enum name in slivka client.
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2021-01-22 MateuszJAL-3690 Fixed slivka wsmenu categories.
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2021-01-18 MateuszMerge remote-tracking branch 'origin/merge/Jalview...
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2020-12-11 MateuszJAL-3690 Let's enable web services (seriously this...
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2020-11-27 Mateusz WaronwyJAL-3690 List.copyOf() workaround
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2020-11-13 Mateusz WaronwyJAL-3690 separate startup and poll code in SeqAnnotationCalc...
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2020-11-12 Mateusz WaronwyJAL-3690 - fixed state inconsistency when restarting...
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2020-11-11 Mateusz WaronwyJAL-3690 partially reworked AlignCalcManager
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2020-10-26 Mateusz WaronwyJAL-3690 - introduce shutdown method that cleans up...
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2020-10-21 Mateusz WaronwyJAL-3690 Documentation for AlignCalcListener
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2020-10-21 Mateusz WaronwyJAL-3690 Catch and notify about worker cancellation...
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2020-10-21 Mateusz WaronwyJAL-3690 Fix concurrent modification exception when...
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2020-10-21 Mateusz WaronwyJAL-3690 Documentation for AlignCalcManagerI2
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2020-10-21 Mateusz WarownyJAL - 3690 AlignCalc rebuilt - FutureTask-based manager
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2020-07-22 Mateusz WarownyJAL-3690 changed AWSThread to use Timer instead
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2020-07-20 Mateusz WarownyJAL-3690 alternative servers menu fix
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2020-07-17 Mateusz WarownyJAL-3690 restore jws1 JPred
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2020-07-16 Mateusz WarownyJAL-3690 switching to CompletableFuture to allow chaining
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2020-07-15 Mateusz WarownyJAL-3690 mark JalviewChangeSupport as deprecated
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2020-07-15 Mateusz WarownyJAL-3690 refactoring web-services discovery
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2020-07-09 Mateusz WarownyMerge branch 'feature/JAL-3686_slivka_client_js_update...
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2020-07-09 Mateusz WarownyMerge branch 'feature/JAL-3686_slivka_client_js_update...
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2020-07-08 Mateusz WarownyJAL-3683 retrieve job status to output stream
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2020-07-08 Mateusz WarownyJAL-6386 update slivka client for j2s compatibility
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2020-07-08 Mateusz WarownyMerge branch 'feature/JAL-3515-slivka-preferences'...
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2020-02-06 MMWarownyImplement simple media type recognition.
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2020-02-04 MMWarownyJAL-3515 Change to JvOptionPane wrapper
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2020-02-04 MMWarownyJAL-3515 Build a WSPreferences page for Slivka services.
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2020-02-04 MMWarownyJAL-3515 Extract core WSDiscoverer methods to a separate...
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2020-02-04 MMWarownyJAL-3515 Update Slivka client library
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2019-12-05 MMWarownyJAL-3066 Comment on ambiguous parameter parsing.
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2019-12-05 MMWarownyJAL-3066 Change Slivka connection to https
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2019-11-28 MMWarownyJAL-3066 Fix incorrect URL resolving with /slivka prefix.
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2019-11-15 MMWarownyJAL-3066 Change server to www.compbio.dundee.ac.uk...
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2019-11-04 MMWarownyInclude missing job states.
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2019-10-17 Mateusz WarownyJAL-3066 Slivka client update for changed api endpoints.
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2019-10-11 Mateusz WarownyJAL-3066 Create labels for fields and hack it to work...
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2019-10-11 Mateusz WarownyMerge remote-tracking branch 'origin/tasks/JAL-3070_wsinterf...
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2019-10-11 Mateusz WarownyJAL-3066 change service type naming to avoid menu entry...
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2019-10-09 Mateusz WarownyJAL-3066 Read parameters directly from args list allowing...
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2019-10-09 Mateusz WarownyUpdate slivka-client library: multiple form field values.
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2019-10-09 Mateusz WarownyJAL-3066 Fix log files retrieval.
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2019-10-07 Mateusz WarownyJal-3066 Retrieve job log and error log from the server.
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2019-10-07 Mateusz WarownyJAL-3066 AACon: pass the instance name of the service...
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2019-10-07 Mateusz WarownyJAL-3066 Check if annotation and features are present...
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2019-10-07 Mateusz WarownyMerge remote-tracking branch 'origin/tasks/JAL-3070_wsinterf...
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2019-10-04 Mateusz WarownyMerge remote-tracking branch 'origin/tasks/JAL-3070_wsinterf...
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2019-10-01 Mateusz WarownyJAL-3066 Sequence annotation services.
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2019-09-27 Mateusz WarownyJAL-3066 Automatically discoverable Protein sequence...
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2019-09-27 Mateusz WarownyMerge remote-tracking branch 'origin/tasks/JAL-3070_wsinterf...
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2019-09-23 Mateusz WarownyJAL-3066 Annotation Service Instance stub
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2019-09-23 Mateusz WarownySlivkaWSDiscoverer formatting fix
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2019-09-23 Mateusz WarownyJAL-3066 Move common web service methods to abstract...
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2019-09-19 Mateusz WarownyJAL-3066 Auto discover multiple sequence alignment...
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2019-09-16 Mateusz WarownySet the initial value of the choice field to the default...
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2019-09-16 Mateusz WarownyAdd the remaining msa services to the Discoverer
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2019-09-11 Mateusz WarownyChange choice field to use dropbox instead of radio...
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2019-09-11 Mateusz WarownyCreate generic msa service instance
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2019-09-06 Mateusz WarownyMerge remote-tracking branch 'origin/alpha/JAL-3066_Jalview_...
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2019-09-06 Mateusz WarownyJAL-3066 Working custom parameters for clustalo
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2019-09-06 Mateusz WarownyJAL-1426 Replacing old apache-http jars.
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2019-09-05 Mateusz WarownyJAL-3066 Implement clustaloWS using slivka system.
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