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2017-08-29	Jim Procter	JAL-2698 spawn a thread to test for and raise auto...	commit \| commitdiff \| tree
2017-08-27	Jim Procter	JAL-2691 assert chains are recovered by AAStructureBindingModel	commit \| commitdiff \| tree
2017-08-27	Jim Procter	JAL-2691 catchall if passed dataset sequences (tests...	commit \| commitdiff \| tree
2017-08-27	Jim Procter	JAL-2693 TODO comments	commit \| commitdiff \| tree
2017-08-27	Jim Procter	JAL-2691 discover any existing chain mappings for a...	commit \| commitdiff \| tree
2017-08-27	Jim Procter	JAL-2691 cached view combo box value javadoc	commit \| commitdiff \| tree
2017-08-21	Jim Procter	Merge branch 'documentation/JAL-2675_release2102b1...	commit \| commitdiff \| tree
2017-08-21	Jim Procter	JAL-2675 typo in what's new href	commit \| commitdiff \| tree
2017-08-18	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-18	Jim Procter	JAL-2675 bump version for branch to 2.10.2b1	commit \| commitdiff \| tree
2017-08-18	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-18	Jim Procter	JAL-1551 formatting	commit \| commitdiff \| tree
2017-08-18	Jim Procter	JAL-2675 release notes entry for 2.10.2b1, updated...	commit \| commitdiff \| tree
2017-08-17	Jim Procter	JAL-2418 ahem - correct year for what's new	commit \| commitdiff \| tree
2017-08-17	Jim Procter	JAL-2418 JAL-2116 use single j2se 7+ argumant with...	commit \| commitdiff \| tree
2017-08-17	Jim Procter	JAL-2418 JAL-2116 make sure java 8,7 vm args are also...	commit \| commitdiff \| tree
2017-08-16	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-16	Jim Procter	Merge branch 'documentation/JAL-2418_release2102' into...	commit \| commitdiff \| tree
2017-08-16	Jim Procter	JAL-2418 formatting	commit \| commitdiff \| tree
2017-08-16	Jim Procter	JAL-2418 occupancy row in What’s New	commit \| commitdiff \| tree
2017-08-16	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-16	Jim Procter	JAL-2418 add GPL to main sources	commit \| commitdiff \| tree
2017-08-16	Jim Procter	JAL-2418 source formatting	commit \| commitdiff \| tree
2017-08-16	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-16	Jim Procter	Merge branch 'documentation/JAL-2418_release2102' into...	commit \| commitdiff \| tree
2017-08-16	Jim Procter	JAL-2418 mirror fonts option doc tweak	commit \| commitdiff \| tree
2017-08-16	Jim Procter	Merge branch 'documentation/JAL-2418_release2102' into...	commit \| commitdiff \| tree
2017-08-16	Jim Procter	JAL-2418 whats new for 2.10.2	commit \| commitdiff \| tree
2017-08-16	Jim Procter	JAL-2418 reclassify some issues to features/bugs resolved	commit \| commitdiff \| tree
2017-08-16	Jim Procter	JAL-2418 typos in release notes	commit \| commitdiff \| tree
2017-08-16	Jim Procter	JAL-2418 check groovy script one-liners for restoring...	commit \| commitdiff \| tree
2017-08-15	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-15	Jim Procter	JAL-2116 fix typo in build.xml for j2se element	commit \| commitdiff \| tree
2017-08-15	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-15	Jim Procter	Merge branch 'documentation/JAL-2418_release2102' into...	commit \| commitdiff \| tree
2017-08-15	Jim Procter	JAL-2418 bump release to Thursday	commit \| commitdiff \| tree
2017-08-15	Jim Procter	Merge branch 'develop' into documentation/JAL-2418_release2102	commit \| commitdiff \| tree
2017-08-14	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-14	Jim Procter	JAL-2418 release notes for JAL-2663	commit \| commitdiff \| tree
2017-08-14	Jim Procter	Merge branch 'patch/JAL-2335_filterAACons' into develop	commit \| commitdiff \| tree
2017-08-14	Jim Procter	Merge branch 'patch/JAL-2116_java9' into develop	commit \| commitdiff \| tree
2017-08-14	Jim Procter	JAL-2116 add 1.8 1.7 compatible launch string	commit \| commitdiff \| tree
2017-08-14	Jim Procter	JAL-2335 choose appropriate alphabet for filtering...	commit \| commitdiff \| tree
2017-08-14	Jim Procter	JAL-2335 source formatting	commit \| commitdiff \| tree
2017-08-14	Jim Procter	JAL-2335 filterNonStandardResidues configurable for...	commit \| commitdiff \| tree
2017-08-14	Jim Procter	Merge branch 'patch/JAL-2116_java9' into develop	commit \| commitdiff \| tree
2017-08-14	Jim Procter	Merge branch 'patch/JAL-2116_java9' into releases/Release_2_...	commit \| commitdiff \| tree
2017-08-14	Jim Procter	JAL-2116 switch to java.se.ee https://bugs.openjdk...	commit \| commitdiff \| tree
2017-08-14	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-14	Jim Procter	Merge branch 'patch/JAL-2663_filterAACons' into develop	commit \| commitdiff \| tree
2017-08-14	Jim Procter	Merge branch 'develop' of http://source.jalview.org...	commit \| commitdiff \| tree
2017-08-14	Jim Procter	JAL-2663 flag and filter to exclude non-standard amino...	commit \| commitdiff \| tree
2017-08-14	Jim Procter	JAL-2663 source formatting	commit \| commitdiff \| tree
2017-08-10	Jim Procter	Merge branch 'patch/JAL-2116_java9' into releases/Release_2_...	commit \| commitdiff \| tree
2017-08-10	Jim Procter	JAL-2116 try '=' syntax http://jigsaw-dev.1059479.n5...	commit \| commitdiff \| tree
2017-08-10	Jim Procter	Merge branch 'patch/JAL-2116_java9' into releases/Release_2_...	commit \| commitdiff \| tree
2017-08-10	Jim Procter	JAL-2116 test java 9 only JNLP launch	commit \| commitdiff \| tree
2017-08-10	Jim Procter	Merge branch 'patch/JAL-2116_java9' into releases/Release_2_...	commit \| commitdiff \| tree
2017-08-10	Jim Procter	JAL-2116 explicit replace j2se element with a java9...	commit \| commitdiff \| tree
2017-08-10	Jim Procter	Merge branch 'patch/JAL-2116_java9' into releases/Release_2_...	commit \| commitdiff \| tree
2017-08-10	Jim Procter	JAL-2116 java9 modules dependency for JNLP file	commit \| commitdiff \| tree
2017-08-10	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-10	Jim Procter	Merge branch 'documentation/JAL-2418_release2102' into...	commit \| commitdiff \| tree
2017-08-10	Jim Procter	JAL-2418 set final release date to 15th August 2017... Signed-off-by: Jim Procter <jprocter@issues.jalview.org>	commit \| commitdiff \| tree
2017-08-10	Jim Procter	JAL-2418 typo in release notes	commit \| commitdiff \| tree
2017-08-10	Jim Procter	JAL-2418 known defect for JAL-2321 in release notes	commit \| commitdiff \| tree
2017-08-10	Jim Procter	JAL-2418 reorganised release notes to topic sections...	commit \| commitdiff \| tree
2017-08-09	Jim Procter	Merge branch 'documentation/JAL-2418_release2102' into...	commit \| commitdiff \| tree
2017-08-09	Jim Procter	Merge branch 'documentation/JAL-2418_release2102' into...	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-2418 JAL-2398 JAL-2397 simpler documentation for...	commit \| commitdiff \| tree
2017-08-09	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-09	Jim Procter	Merge branch 'documentation/JAL-2418_release2102' into...	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-2397 JAL-2398 documentation for reinstating legacy...	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-2426 Rfam download suffix	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-2426 JAL-1270 report Xfam download URL used if...	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-2425 raw stockholm download URLs	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-1270 testProps should also enable debug logging	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-2425 test for alignment metadata retrieved from...	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-2425 remove overloaded getSequenceRecords method...	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-2418 release notes	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-2418 more release notes	commit \| commitdiff \| tree
2017-08-09	Jim Procter	JAL-2418 JAL-2611 and rejigged overview documentation	commit \| commitdiff \| tree
2017-08-09	Jim Procter	Merge branch 'bug/JAL-2634' into develop	commit \| commitdiff \| tree
2017-08-09	Jim Procter	Merge branch 'documentation/JAL-2418_release2102' into...	commit \| commitdiff \| tree
2017-08-07	Jim Procter	Merge branch 'bug/JAL-2592userDefinedScheme' into develop	commit \| commitdiff \| tree
2017-08-07	Jim Procter	Merge branch 'develop' into releases/Release_2_10_2_Branch	commit \| commitdiff \| tree
2017-08-07	Jim Procter	Merge branch 'documentation/JAL-2418_release2102' into...	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-2418 JAL-2468 known issue	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-2482 JAL-2487 documented in release notes	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-2482 release notes	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-2418 release notes formatting	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-2418 release notes	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-2418 typo and formatting of search.html	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-1648 documentation of search history for Find command	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-2418 reformatting and scripting section in what...	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-2418 release notes	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-2418 formatting	commit \| commitdiff \| tree
2017-08-07	Jim Procter	JAL-1476 JAL-2418 insufficient columns for superposition...	commit \| commitdiff \| tree
2017-08-04	Jim Procter	JAL-2418 JAL-1632 JAL-2416 calculations dialog documentation...	commit \| commitdiff \| tree
2017-08-04	Jim Procter	JAL-2418 new features in release notes JAL-1933 JAL...	commit \| commitdiff \| tree
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