| 2015-08-27 |
gmungoc | JAL-1725 restrict Jalview's Jetty server to localhost
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1830 dropped reference counts for mappings, instead...
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1596 check for null pointer (thread running after...
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1270 test separated out of JalviewChimeraView
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1270 corrected path to test properties file
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1270 separated Jmol and Chimera tests to avoid...
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1759 updated unit test for removal of trim of Atom...
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1840 correct setting status bar for structure mouseover
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1759 added check for null (console 'history')
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | Fix to use correct resource bundle entry
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1759 corrected syntax for 'atom picked' callback...
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commit | commitdiff | tree |
| 2015-08-25 |
gmungoc | JAL-1780 just a spelling change
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commit | commitdiff | tree |
| 2015-08-25 |
gmungoc | JAL-1674 more correct status bars in splitframe mouseover...
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commit | commitdiff | tree |
| 2015-08-24 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-24 |
gmungoc | JAL-1759 removed trim() of Atom.resNumIns as not backwards...
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commit | commitdiff | tree |
| 2015-08-24 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-24 |
gmungoc | JAL-845 error message on syserr if supplied files don...
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commit | commitdiff | tree |
| 2015-08-24 |
gmungoc | remove mentions of non-functional RNAInteraction colourscheme
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commit | commitdiff | tree |
| 2015-08-20 |
gmungoc | JAL-1833 added unit tests (some failing) for wrapToolitp
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commit | commitdiff | tree |
| 2015-08-19 |
gmungoc | JAL-1782 don't save TESTNG output summary to git
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commit | commitdiff | tree |
| 2015-08-19 |
gmungoc | JAL-1725 log to sysout when listener shuts down
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commit | commitdiff | tree |
| 2015-08-19 |
gmungoc | JAL-1742 suppress 'add chain' option for Jmol, pull...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1800 separated SearchResults.getCharacters() from...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1270 testIsMappable added
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1805 corrected javadoc only
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1829 JAL-1830 refactoring for correct mapping ...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1800 smarter matching when following mouseover...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1691 scan full width and depth of alignment for...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1800 SearchResults.equals() to allow smarter mouseover...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1551 updated to reflect changes to Eclipse preferences...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1551 properties sorted (unchanged) for ease of...
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commit | commitdiff | tree |
| 2015-08-10 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-10 |
gmungoc | JAL-1516 indent multiple annotation parameters on new...
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commit | commitdiff | tree |
| 2015-07-15 |
gmungoc | JAL-1813 only pair up A-Z with a-z if annotation is RNA
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commit | commitdiff | tree |
| 2015-07-12 |
gmungoc | JAL-1759 corrected jmol applet lib name
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commit | commitdiff | tree |
| 2015-07-08 |
gmungoc | JAL-1759 merge from develop
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commit | commitdiff | tree |
| 2015-07-08 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-07-08 |
gmungoc | JAL-1598 replaced faulty regex, amended Varna call...
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commit | commitdiff | tree |
| 2015-07-06 |
gmungoc | JAL-1081 unit tests added
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commit | commitdiff | tree |
| 2015-07-06 |
gmungoc | JAL-1782 refactored test to ensure it passes in TestNG
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commit | commitdiff | tree |
| 2015-07-06 |
gmungoc | JAL-1421 generics used for leaner safer code
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commit | commitdiff | tree |
| 2015-07-06 |
gmungoc | JAL-1799 tweaked calculation for applet, now showing...
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commit | commitdiff | tree |
| 2015-07-06 |
gmungoc | JAL-1799 equivalent logic in applet
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commit | commitdiff | tree |
| 2015-07-03 |
gmungoc | JAL-1759 updated Jmol version in nbproject, install...
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commit | commitdiff | tree |
| 2015-07-03 |
gmungoc | JAL-892 jnlp, installAnywhere, build, licence references...
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commit | commitdiff | tree |
| 2015-07-03 |
gmungoc | Merge branch 'develop' into features/JAL-892varnaToProject
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commit | commitdiff | tree |
| 2015-07-03 |
gmungoc | JAL-892 1 second delay for correct initial rendering...
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commit | commitdiff | tree |
| 2015-07-02 |
gmungoc | JAL-1677 check all response lines when parsing REST...
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commit | commitdiff | tree |
| 2015-07-01 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-07-01 |
gmungoc | JAL-1681 more condensed tooltip where codons share...
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commit | commitdiff | tree |
| 2015-07-01 |
gmungoc | JAL-1802 explanatory comment added
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commit | commitdiff | tree |
| 2015-07-01 |
gmungoc | JAL-1802 handle slide sequences edits in split frame...
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commit | commitdiff | tree |
| 2015-07-01 |
gmungoc | Merge branch 'develop' into features/JAL-1759jmolUpdate
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commit | commitdiff | tree |
| 2015-07-01 |
gmungoc | JAL-1799 deduct more space for decorators on Windows
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commit | commitdiff | tree |
| 2015-07-01 |
gmungoc | JAL-1619 align the added sequences to match what they...
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commit | commitdiff | tree |
| 2015-06-30 |
gmungoc | JAL=1759 fix Jmol state command bug; remove debug output
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commit | commitdiff | tree |
| 2015-06-30 |
gmungoc | JAL-1759 unused JmolPopup removed, code tidy for generics
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commit | commitdiff | tree |
| 2015-06-30 |
gmungoc | JAL-1759 deprecated EnfinEnvision2OneWay removed
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commit | commitdiff | tree |
| 2015-06-30 |
gmungoc | JAL-1759 JMol now Jmol !
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commit | commitdiff | tree |
| 2015-06-30 |
gmungoc | JAL-1759 unused field / methods removed
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commit | commitdiff | tree |
| 2015-06-30 |
gmungoc | JAL-1691 trackpad scrolling goes to full width even...
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commit | commitdiff | tree |
| 2015-06-29 |
gmungoc | JAL-1799 adjusted annotation height calculation
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commit | commitdiff | tree |
| 2015-06-29 |
gmungoc | JAL-1759 correct conversion of Jmol Chain.chainId ...
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commit | commitdiff | tree |
| 2015-06-26 |
gmungoc | JAL-1782 BeforeMethod added to fix test in NG
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commit | commitdiff | tree |
| 2015-06-26 |
gmungoc | Merge branch 'develop' into features/JAL-892varnaToProject
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commit | commitdiff | tree |
| 2015-06-26 |
gmungoc | JAL-1759 changed to non-deprecated Viewer.renderScreenImage()
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commit | commitdiff | tree |
| 2015-06-26 |
gmungoc | Merge branch 'develop' into features/JAL-1759jmolUpdate
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commit | commitdiff | tree |
| 2015-06-26 |
gmungoc | JAL-1759 updates for Jmol 14.2.14_25.06.11
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commit | commitdiff | tree |
| 2015-06-22 |
gmungoc | JAL-892 tidy Varna panel names; JAL-1789 simplified...
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commit | commitdiff | tree |
| 2015-06-22 |
gmungoc | JAL-893 upgrade to VARNAv3-93.jar
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commit | commitdiff | tree |
| 2015-06-19 |
gmungoc | JAL-892 check viewer is linked to alignment panel on...
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commit | commitdiff | tree |
| 2015-06-18 |
gmungoc | JAL-1270 test added
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commit | commitdiff | tree |
| 2015-06-18 |
gmungoc | JAL-1544 typos in comments
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commit | commitdiff | tree |
| 2015-06-18 |
gmungoc | JAL-892 JAL-1779 save/restore Varna viewer to/from...
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commit | commitdiff | tree |
| 2015-06-18 |
gmungoc | JAL-1695 default ENABLE_SPLIT_FRAME to true for desktop
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commit | commitdiff | tree |
| 2015-06-18 |
gmungoc | JAL-892 schema changes (rnaViewer) for save Varna to...
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commit | commitdiff | tree |
| 2015-06-18 |
gmungoc | JAL-1781 annotation.sequenceRef now sequence id not...
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commit | commitdiff | tree |
| 2015-06-17 |
gmungoc | JAL-1588 restore ChimeraViewFrame geometry as well
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commit | commitdiff | tree |
| 2015-06-17 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-06-17 |
gmungoc | JAL-1778 reinstated this.ssm to handle 'close all windows...
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commit | commitdiff | tree |
| 2015-06-15 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-06-15 |
gmungoc | JAL-1778 deregister as a listener when panel closed
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commit | commitdiff | tree |
| 2015-06-10 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-06-10 |
gmungoc | Merge remote-tracking branch
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commit | commitdiff | tree |
| 2015-06-10 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-06-10 |
gmungoc | JAL-1764 save Chimera/Jmol state as separate entries...
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commit | commitdiff | tree |
| 2015-06-08 |
gmungoc | JAl-1421 fix method reflection argument (properly this...
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commit | commitdiff | tree |
| 2015-06-08 |
gmungoc | JAL-1421 undid premature 'improvement' of method parameter...
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commit | commitdiff | tree |
| 2015-06-05 |
gmungoc | JAL-1752 structure highlight scoped to only its mapped...
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commit | commitdiff | tree |
| 2015-06-05 |
gmungoc | JAL-1588 error dialog if Chimera project opened on...
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commit | commitdiff | tree |
| 2015-06-05 |
gmungoc | JAL-1622 fix bug computing superposition + associated...
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commit | commitdiff | tree |
| 2015-06-05 |
gmungoc | JAL-1746 return empty string rather than null in getStateInfo
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commit | commitdiff | tree |
| 2015-06-05 |
gmungoc | JAL-1622 Chimera command timeout increased to 5 secs...
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commit | commitdiff | tree |
| 2015-06-05 |
gmungoc | JAL-1622 duplicate assignment removed (no functional...
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commit | commitdiff | tree |
| 2015-06-05 |
gmungoc | JAL-1753 JAL-1596 asynchronous command to Chimera ...
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commit | commitdiff | tree |
| 2015-06-05 |
gmungoc | JAL-1622 code tidy only, no functional change
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commit | commitdiff | tree |
| 2015-06-05 |
gmungoc | JAL-1749 correcting snafu in last commit
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commit | commitdiff | tree |
| 2015-06-04 |
gmungoc | Clear status bar message when initialisation complete
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commit | commitdiff | tree |
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