git://source.jalview.org / jalview.git / search
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
JAL-1812 groovy always present
2016-06-20 Jim ProcterJAL-1812 groovy always present
 commit | commitdiff | tree
2016-06-20 Jim ProcterJAL-1812 release notes
 commit | commitdiff | tree
2016-06-20 Jim ProcterJAL-1812 documentation TBC for AlignFrame->Calculate...
commit | commitdiff | tree
2016-06-20 Jim ProcterJAL-2089 typo
 commit | commitdiff | tree
2016-06-20 Jim ProcterJAL-1868 fix typo in test data.
 commit | commitdiff | tree
2016-06-20 Jim ProcterMerge branch 'features/JAL-1812_JAL-2083_groovyBinding...
commit | commitdiff | tree
2016-06-20 Jim ProcterMerge branch 'develop' into features/JAL-1812_JAL-2083_groov...
commit | commitdiff | tree
2016-06-16 Jim Proctertests for validating start-end number/sequence length...
commit | commitdiff | tree
2016-06-10 Jim ProcterMerge branch 'r291_docs' into develop
 commit | commitdiff | tree
2016-06-10 Jim ProcterJAL-2089 docs for June 10th
 commit | commitdiff | tree
2016-06-10 Jim ProcterJAL-2089 signed off bug release notes
 commit | commitdiff | tree
2016-06-10 Jim ProcterJAL-1941 remove improper test tag from Annotate3D test...
commit | commitdiff | tree
2016-06-10 Jim ProcterJAL-2089 documenting for 8th june RC1
 commit | commitdiff | tree
2016-06-10 Jim ProcterJAL-1941 added test URL and notes about PyRNA restclient
 commit | commitdiff | tree
2016-06-10 Jim ProcterJAL-1941 Annotate3d tests should be in network group
 commit | commitdiff | tree
2016-06-02 Jim ProcterJAL-2125 remove SHA256 digest manifest and signatures...
commit | commitdiff | tree
2016-06-02 Jim ProcterJAL-2125 remove SHA256 digest manifest and signatures...
commit | commitdiff | tree
2016-06-01 Jim ProcterMerge branch 'testfix/JAL-2038' into develop
 commit | commitdiff | tree
2016-06-01 Jim ProcterJAL-2038 fix tests for case insensitive eSequenceIdMatcher
 commit | commitdiff | tree
2016-06-01 Jim ProcterJAL-2038 ensure bare Strings are lowercased before...
commit | commitdiff | tree
2016-06-01 Jim ProcterMerge branch 'apifix/JAL-1926_JAL-2106' into develop
 commit | commitdiff | tree
2016-06-01 Jim Procterfix build
 commit | commitdiff | tree
2016-05-31 Jim ProcterMerge branch 'apifix/JAL-1926_JAL-2106' into develop
 commit | commitdiff | tree
2016-05-31 Jim ProcterJAL-1551 JAL-2106 javadoc
 commit | commitdiff | tree
2016-05-31 Jim ProcterJAL-2110 abstract methods should never reference their...
commit | commitdiff | tree
2016-05-31 Jim ProcterMerge branch 'features/JAL-2113_emblXml1.2' into develop
 commit | commitdiff | tree
2016-05-31 Jim ProcterMerge branch 'develop' into features/JAL-2113_emblXml1.2
 commit | commitdiff | tree
2016-05-31 Jim ProcterMerge branch 'jims/291patches' into develop
 commit | commitdiff | tree
2016-05-30 Jim ProcterJAL-553 JAL-1557 always send selections after triggering...
commit | commitdiff | tree
2016-05-30 Jim ProcterJAL-1557 allow group associated rows to be used to...
commit | commitdiff | tree
2016-05-30 Jim ProcterJAL-2077 release notes
 commit | commitdiff | tree
2016-05-30 Jim ProcterJAL-2077 fix: convenience method and checks for CMD...
commit | commitdiff | tree
2016-05-30 Jim ProcterJAL-1551 formatting
 commit | commitdiff | tree
2016-05-30 Jim ProcterJAL-2089 update release date for 2.9.1
 commit | commitdiff | tree
2016-05-30 Jim ProcterJAL-1552 fix JAL-2122 resolve File->string before adding...
commit | commitdiff | tree
2016-05-26 Jim ProcterJAL-2030 - add servlet-api-3.1.jar to installAnywhere...
commit | commitdiff | tree
2016-05-26 Jim ProcterMerge branch 'develop' of http://source.jalview.org...
commit | commitdiff | tree
2016-05-26 Jim ProcterJAL-2121 refactor todo
 commit | commitdiff | tree
2016-05-26 Jim ProcterJAL-2089 update developer doc
 commit | commitdiff | tree
2016-05-26 Jim ProcterMerge branch 'develop' of http://source.jalview.org...
commit | commitdiff | tree
2016-05-26 Jim ProcterJAL-1400 JAL-2089 allow configurable signature algorithms
 commit | commitdiff | tree
2016-05-26 Jim ProcterJAL-1551 formatting
 commit | commitdiff | tree
2016-05-26 Jim ProcterJAL-1552 refactor shared dataflavor hander
 commit | commitdiff | tree
2016-05-26 Jim ProcterJAL-1552 extra debug logging for dataflavor if drop...
commit | commitdiff | tree
2016-05-25 Jim ProcterJAL-1522 patch - try to pick best text dataflavor
 commit | commitdiff | tree
2016-05-06 Jim ProcterMerge branch 'features/JAL-192_scalerelativetoseq'...
commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-192 fix javadoc
 commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-192 JAL-2099 unused variables
 commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-1551 formatting
 commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-192 JAL-2099 reuse refactored scale code for wrapped...
commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-192 JAL-2099 factored out calculation from rendering...
commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-192 JAL-2099 factored out calculation from rendering...
commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-192 JAL-2099 factored out calculation from rendering...
commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-2100 centre triangles on hidden column vertical...
commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-2100 optimisation
 commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-2100 triangles shown below in jvdesktop unwrapped...
commit | commitdiff | tree
2016-05-06 Jim ProcterJAL-192 patch off-by-one for pathological gap case
 commit | commitdiff | tree
2016-05-05 Jim ProcterJAL-192 patch for off-by one and pathological case...
commit | commitdiff | tree
2016-05-04 Jim ProcterRevert "JAL-2074 removed xerces to explore wierdness"
 commit | commitdiff | tree
2016-05-03 Jim ProcterMerge branch 'r291_docs' into develop
 commit | commitdiff | tree
2016-05-02 Jim ProcterJAL-1270 move some Network tests to External (require...
commit | commitdiff | tree
2016-05-02 Jim ProcterJAL-1270 capitalise test groups
 commit | commitdiff | tree
2016-05-02 Jim ProcterJAL-2089 JAL-1551 formatting
 commit | commitdiff | tree
2016-05-02 Jim ProcterJAL-2089 release 2.9.1 entry in release notes
 commit | commitdiff | tree
2016-04-29 Jim ProcterMerge branch 'features/JAL-192_scalerelativetoseq'...
commit | commitdiff | tree
2016-04-29 Jim ProcterJAL-192 need visible and actual sequence limits for...
commit | commitdiff | tree
2016-04-29 Jim ProcterJAL-192 fix bounds when no hidden regions, and when...
commit | commitdiff | tree
2016-04-29 Jim ProcterJAL-192 scale origin relative to start of reference...
commit | commitdiff | tree
2016-04-29 Jim ProcterJAL-966 JAL-1553
 todo: remove UI components from Column...
commit | commitdiff | tree
2016-04-29 Jim ProcterJAL-1551 formatting

 commit | commitdiff | tree
2016-04-29 Jim ProcterJAL-192 ‘efficiently’ locate visible bounds for a sequence...
commit | commitdiff | tree
2016-04-29 Jim ProcterJAL-1551 formatting
 commit | commitdiff | tree
2016-04-27 Jim ProcterMerge branch 'features/JAL-192_scalerelativetoseq'...
commit | commitdiff | tree
2016-04-27 Jim ProcterJAL-192 fix off-by-one for alignment ruler with no...
commit | commitdiff | tree
2016-04-27 Jim ProcterMerge branch 'features/JAL-192_scalerelativetoseq'...
commit | commitdiff | tree
2016-04-27 Jim ProcterJAL-192 show reference sequence position and residue...
commit | commitdiff | tree
2016-04-27 Jim ProcterJAL-1366 JAL-2086 reinstate bolding of reference sequence
 commit | commitdiff | tree
2016-04-27 Jim ProcterJAL-2085 JAL-2086 fix hiddenRepSequence and new referenceSeq...
commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2079 fix broken cherry-pick conflict merge
 commit | commitdiff | tree
2016-04-26 Jim ProcterMerge branch 'develop' of http://source.jalview.org...
commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2079 update GPL header for new Xfam tests
 commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2079 use new service to retrieve Rfam Seed alignment
 commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2084 JAL-2079 removed RFAM(Full) from Xfam Network...
commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2079 disable RFAM(Full) source until we can retrieve...
commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2079 update URL for RFAM and PFAM sources
 commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2079 allow prefix+<XFAMID>+suffix type URL signature
 commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2077 reinstate JAL-1554 fix for left-then-right...
commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2077 reinstate annotation label popup by handling...
commit | commitdiff | tree
2016-04-26 gmungocJAL-1981 catch any exception when setting QuaQua look...
commit | commitdiff | tree
2016-04-26 Jim ProcterMerge branch 'develop' into groovy/JAL-2074_upgradeto2.4.4
 commit | commitdiff | tree
2016-04-26 Jim ProcterMerge branch 'bug/JAL-2080_javaws_slow_291' into develop
 commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2080 removed all 'Class-Path' references in libs
 commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2080 removed classpath references to Xerces and...
commit | commitdiff | tree
2016-04-26 Jim ProcterJAL-2080 mark jalview.jar as main jar resource
 commit | commitdiff | tree
2016-04-25 Jim ProcterJAL-2074 disable security manager at start up re: http...
commit | commitdiff | tree
2016-04-25 Jim ProcterJAL-2074 removed xerces to explore wierdness
 commit | commitdiff | tree
2016-04-25 Jim ProcterJAL-2074 reinstate upgrade to groovy 2.8.4-indy
 commit | commitdiff | tree
2016-04-25 Jim ProcterJAL-2074 reinstate upgrade to groovy 2.8.4-indy
 commit | commitdiff | tree
2016-04-25 Jim ProcterJAL-2074 add the groovy 1.8.2 library back to classpath
 commit | commitdiff | tree
2016-04-25 Jim ProcterJAL-2074 backed out groovy upgrade - back to 1.8.2
 commit | commitdiff | tree
next