jalview.git
2018-05-07 Jim ProcterJAL-2321 isParseImmediately() allows the parse() method...
2018-05-07 Jim ProcterJAL-2321 allow JmolParser to be configured before parsi...
2018-05-07 Jim ProcterJAL-2906 apply GPLv3 license source
2018-05-07 Jim ProcterJAL-2960 don’t override a swing method and create infin...
2018-05-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' of source...
2018-05-04 gmungocJAL-2906 small tweaks to release notes
2018-05-04 Jim ProcterJAL-2906 2.10.4 release for 8th May 2018
2018-05-04 Jim ProcterMerge branch 'bug/JAL-2899' into releases/Release_2_10_...
2018-05-04 Jim ProcterJAL-2906 removed mention of experimental features,...
2018-05-04 Jim ProcterJAL-2976 patch NPE when trying to open Uniprot FTS
2018-05-04 Jim ProcterJAL-2929 JAL-2922 release notes
2018-05-04 Jim ProcterJAL-2976 typo in installAnywhere build for VAqua dependency
2018-05-04 Jim ProcterJAL-2960 release notes
2018-05-04 Jim ProcterJAL-2948 transfer features/annotation is now available...
2018-05-04 Jim ProcterJAL-2960 raise the structure view after adding structur...
2018-05-04 Jim ProcterJAL-2976 Vaqua fallback release notes JAL-2906
2018-05-04 Jim ProcterMerge branch 'patch/JAL-2976_vaqua4_fallback' into...
2018-05-02 Jim ProcterJAL-2976 fallback to Vaqua for Macs that don’t work...
2018-05-02 Jim ProcterJAL-2976 Vaqua(4) as a dependency
2018-05-01 Jim ProcterJAL-2899 release notes
2018-05-01 Jim ProcterJAL-2973 JAL-2974 known defects for 2.10.4 (JAL-2906)

2018-05-01 Jim ProcterJAL-2925 release notes
2018-05-01 Jim ProcterJAL-2593 JAL-2945 JAL-2952 JAL-2954 release notes for...
2018-05-01 Jim ProcterJAL-2223 JAL-2781 JAL-2780 JAL-2946 JAL-2906 release...
2018-05-01 Jim ProcterJAL-2906 reformat release notes
2018-05-01 Jim ProcterJAL-2906 typo
2018-05-01 Jim ProcterJAL-2944 revised docs and structure chooser screen...
2018-05-01 Jim ProcterJAL-2899 colouring moved from SwingWorker to a backgrou...
2018-04-30 Jim ProcterMerge branch 'bug/JAL-2899' into releases/Release_2_10_...
2018-04-30 Jim ProcterJAL-2906 release 2.10.4 on 1st May 2018
2018-04-25 Jim ProcterMerge branch 'features/JAL-2944_openStructuresInSelecte...
2018-04-23 gmungocJAL-2954 more efficient SearchResults.markColumns
2018-04-23 gmungocJAL-2952 set negative TempFactor values as AlignmentAnn...
2018-04-18 gmungocJAL-2593 render 'duplicate' features if transparency...
2018-04-13 gmungocMerge branch 'features/JAL-2944_openStructuresInSelecte... features/JAL-2944_openStructuresInSelectedView
2018-04-12 gmungocJAL-2223 don't add duplicate mappings to StructureSelec...
2018-04-12 gmungocJAL-1847 minor post-review updates
2018-04-12 gmungocJAL-2944 tidies for review comments
2018-04-11 Jim ProcterJAL-2946 catch unexpected SIFTS mapping exceptions...
2018-04-09 Jim ProcterJAL-2944 ’new view’ and ‘add to view’ button rather...
2018-04-09 Jim ProcterJAL-1847 superpose checkbox in structure chooser
2018-04-09 Jim ProcterJAL-1847 JAL-2944 make superposition step a configurabl...
2018-04-06 Jim Procterfailing test for JAL-2223
2018-04-05 Jim ProcterJAL-2945 resolve model as PDB file. Need to verify...
2018-04-05 Jim ProcterJAL-2945 failing test for structure mapping
2018-04-05 Jim ProcterJAL-2945 formatting
2018-04-05 Jim ProcterJAL-2945 provide access to last highlighted results
2018-04-05 Jim ProcterJAL-2944 open selected structures in existing or a...
2018-04-05 Jim ProcterJAL-2944 combo box to pick which viewer to load structu...
2018-04-05 Jim ProcterJAL-2944 methods to check existence and get a title...
2018-04-05 Jim ProcterJAL-2944 allow StructureViewer proxy to be created...
2018-04-05 Jim ProcterJAL-2944 get viewer’s title via toString()
2018-04-05 Jim ProcterJAL-2944 expose UI update methods in api
2018-04-05 Jim ProcterJAL-2944 remove modal prompt logic and expose methods...
2018-04-05 Jim ProcterJAL-2944 pull up structure viewer discovery routine...
2018-03-22 gmungocJAL-2929 unit test, tidy unused/unneeded fields/parameters
2018-03-21 Jim ProcterMerge branch 'patch/JAL-2754_patch2104forJava8' into...
2018-03-21 Jim ProcterJAL-2754 don’t use deprecated api for getting font...
2018-03-21 Jim ProcterJAL-2754 fix eclipse compilation error about referencin...
2018-03-21 gmungocJAL-2929 use configure Overview gap colour instead...
2018-03-21 Jim ProcterMerge branch 'patch/JAL-2754_patch2104forJava8' into...
2018-03-21 Jim ProcterJAL-2754 dont put '<>' in <echo> text!
2018-03-21 Jim ProcterMerge branch 'patch/JAL-2754_patch2104forJava8' into...
2018-03-21 Jim ProcterJAL-2754 clean up proguard path spec and config variables
2018-03-21 gmungocJAL-2754 renamed proguard.jar to include version number
2018-03-21 gmungocJAL-2754 5.3.3 update of proguard.jar
2018-03-21 gmungocJAL-2754 update to specify Java 1.8(+)
2018-03-21 gmungocJAL-2754 update to Java 1.8
2018-03-16 gmungocJAL-2922 update FeatureRenderer and repaint feature...
2018-03-15 gmungocJAL-2893 enabling Get Crossreferences to ENSEMBLGENOMES
2018-03-14 gmungocJAL-2893 include ENSEMBLGENOMES as a 'roundtrip db...
2018-03-14 gmungocJAL-2679 reinstating changes lost in VCF merge
2018-03-14 Jim ProcterJAL-2930 JAL-2924 JAL-2913 JAL-2926 JAL-2906 2.10.4...
2018-03-13 gmungocJAL-2913 use FIGURE_FIXEDIDWIDTH (not FIGURE_USERIDWIDTH)
2018-03-08 gmungocJAL-2885 tests updated for code changes
2018-03-08 gmungocJAL-2930 use MouseWheelEvent.getPreciseWheelRotation...
2018-03-07 gmungocMerge branch 'bugs/JAL-2922' into releases/Release_2_10...
2018-03-07 gmungocJAL-2922 [2] not [1] for Boolean column of table bugs/JAL-2922
2018-03-07 gmungocMerge branch 'bugs/JAL-2922' into releases/Release_2_10...
2018-03-07 gmungocJAL-2922 i18n and bespoke handler for Invert Selection
2018-03-07 gmungocMerge branch 'bug/JAL-2924nullTooltip' into releases...
2018-03-07 gmungocJAL-2926 fix copy group consensus (and paste sequence...
2018-03-07 gmungocJAL-2925 handle empty annotation when copying group...
2018-03-07 gmungocJAL-2913 use FIGURE_USERIDWIDTH for fixed id width...
2018-02-28 gmungocJAL-2924 no tooltip over null annotation positions bug/JAL-2924nullTooltip
2018-02-28 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch_merged_JAL...
2018-02-27 Jim ProcterJAL-2759 release notes for 2.10.4
2018-02-27 Jim ProcterMerge branch 'feature/JAL-2759' into merge/JAL-2759_2104
2018-02-27 Jim Procterfix for JAL-2922 - update states all at once and then...
2018-02-26 Jim ProcterMerge branch 'feature/JAL-984splitAdjuster' into releas...
2018-02-26 Jim ProcterJAL-984 remove all references to idwidth.gif - in build... feature/JAL-984splitAdjuster
2018-02-23 Jim ProcterJAL-2885 release notes
2018-02-23 Jim ProcterMerge branch 'features/JAL-2885UniprotHttps' into relea...
2018-02-23 Jim ProcterJAL-2885 xfam https features/JAL-2885UniprotHttps
2018-02-23 Jim ProcterJAL-2885 XFAM_DOMAIN->XFAM_BASEURL
2018-02-23 Jim ProcterJAL-2885 Ensembl* -> https
2018-02-23 Jim ProcterJAL-2885 ENSEMBL-DOMAIN -> ENSEMBL-BASEURL
2018-02-23 Jim ProcterJAL-2885 renamed base URL getter from getDomain..
2018-02-22 Jim ProcterMerge branch 'feature/JAL-984splitAdjuster' into releas...
2018-02-22 Jim ProcterJAL-984 ID width adjuster needs to be white !
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