jalview.git
2015-09-02 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-02 tcofoegbumerge
2015-09-02 tcofoegbuJAL-1805 JAL-1782 added a draft documentation for TestN...
2015-09-02 Jim ProcterJAL-1853 add test to list for ant task
2015-09-02 gmungocJAL-1619 additions, standardised menu item symbols
2015-09-02 gmungocJAL-1681 mention of cDNA consensus added
2015-09-02 Jim ProcterJAL-535 todo: refactor logic to desktop controller...
2015-09-02 Jim ProcterJAL-1772 non-functional test added. not doing any more...
2015-09-02 gmungocJAL-1673 new test to verify transferRESNUMFeatures()
2015-09-02 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-01 Jim ProcterMerge branch 'bug/JAL-1853_gapchar_output' into develop
2015-09-01 Jim ProcterJAL-1853 add test to Functional group
2015-09-01 Jim ProcterJAL-1853 make getVisibleSeqs more memory efficient...
2015-09-01 Jim ProcterJAL-1853 refactor clip routine from getSequenceStrings
2015-09-01 Jim Procterpatch for JAL-1853 - use given gap character to reconst...
2015-09-01 Jim ProcterJAL-1853 test origin of gapChar bug in AlignView method
2015-09-01 gmungocJAL-1693 split frame opened for get xrefs, translate...
2015-09-01 Jim ProcterJAL-1853 test demonstrating bug
2015-09-01 gmungocJAL-1672 additional assertions added
2015-09-01 gmungocJAL-1355 user error message text externalised
2015-09-01 tcofoegbuJAL-1668 house keeping
2015-08-31 tcofoegbumerge
2015-08-31 tcofoegbuJAL-1700 updated error handling with suggested improvem...
2015-08-28 gmungocJAL-1836 temporary workaround for negative resNumIns...
2015-08-27 gmungocJAL-1270 comments added regarding required remote service
2015-08-27 gmungocJAL-1759 updated unit test for removal of trim on Atom...
2015-08-27 gmungocJAL-1830 tests relocated to AlignViewportTest after...
2015-08-27 gmungocJAL-1627 updated expected tooltip text in unit test
2015-08-27 gmungocJAL-1830 unit tests for removing (or not) mappings...
2015-08-27 gmungocJAL-1830 refactored so no jalview.gui references from...
2015-08-27 gmungocJAL-845 compacting duplicated code
2015-08-27 gmungocJAL-1611 debug sysout suppressed
2015-08-27 gmungocJAL-1544 message label corrected
2015-08-27 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-08-27 gmungocJAL-1701 help page for Split Frame view linked in
2015-08-27 Jim ProcterJAL-1844 adding more missing jars - jersey, other json...
2015-08-27 gmungocJAL-1544 'Jalview' consistently capitalised
2015-08-27 gmungocJAL-892 JAL-1764 Varna and Chimera also saved to projec...
2015-08-27 gmungocJAL-892 saved to project; external help link updated
2015-08-27 gmungocJAL-1727 added EBI mirror of DAS registry
2015-08-27 gmungocJAL-1596 JAL-1725 JAL-1588 updates for selection in...
2015-08-27 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-08-27 gmungocJAL-1725 restrict Jalview's Jetty server to localhost
2015-08-27 Jim Procterfix for JAL-1844 add jersey-core,json,client-1.19 to...
2015-08-26 gmungocJAL-1830 dropped reference counts for mappings, instead...
2015-08-26 gmungocJAL-1596 check for null pointer (thread running after...
2015-08-26 gmungocJAL-1270 test separated out of JalviewChimeraView
2015-08-26 gmungocJAL-1270 corrected path to test properties file
2015-08-26 gmungocJAL-1270 separated Jmol and Chimera tests to avoid...
2015-08-26 gmungocJAL-1759 updated unit test for removal of trim of Atom...
2015-08-26 gmungocJAL-1840 correct setting status bar for structure mouseover
2015-08-26 gmungocJAL-1759 added check for null (console 'history')
2015-08-26 gmungocFix to use correct resource bundle entry
2015-08-26 gmungocJAL-1759 corrected syntax for 'atom picked' callback...
2015-08-25 gmungocJAL-1780 just a spelling change
2015-08-25 gmungocJAL-1674 more correct status bars in splitframe mouseov...
2015-08-24 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-08-24 gmungocJAL-1759 removed trim() of Atom.resNumIns as not backwa...
2015-08-24 tcofoegbuJAL-1641 externalised save_as_biojs_html
2015-08-24 tcofoegbuJAL-1835 corrected Embbed to Embed
2015-08-24 tcofoegbumerge
2015-08-24 tcofoegbuJAL-1834 removed quotes around truncated strings with...
2015-08-24 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-08-24 gmungocJAL-845 error message on syserr if supplied files don...
2015-08-24 gmungocremove mentions of non-functional RNAInteraction colour...
2015-08-21 tcofoegbuJAL-1834 capped the tool-tip text at 500. once that...
2015-08-21 tcofoegbuJAL-1834 disabled action buttons (Back / Ok / Cancel...
2015-08-21 tcofoegbuJAL-1443 bug fix for loading pasted alignments from...
2015-08-21 tcofoegbuJAL-1831 updated json schema doc
2015-08-21 tcofoegbuclean up
2015-08-21 tcofoegbuJAL-1780 made the 'Select All' checkbox to be shown...
2015-08-21 tcofoegbuJAL-1780 changed 'Check All' to 'Select All' and extern...
2015-08-20 tcofoegbumerge
2015-08-20 tcofoegbuJAL-1833 revised implementation
2015-08-20 gmungocJAL-1833 added unit tests (some failing) for wrapToolitp
2015-08-19 gmungocJAL-1782 don't save TESTNG output summary to git
2015-08-19 gmungocJAL-1725 log to sysout when listener shuts down
2015-08-19 gmungocJAL-1742 suppress 'add chain' option for Jmol, pull...
2015-08-18 tcofoegbuJAL-1861 bugfix to allow parsing of stockholm files...
2015-08-18 tcofoegbuJAL-1835 added UI for BioJSON embbeding preference
2015-08-18 tcofoegbuJAL-1835 made BioJSON embedding to html exports configu...
2015-08-18 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2015-08-18 tcofoegbuJAL-1834 added tooltip to the PDB sequence fetcher...
2015-08-18 tcofoegbuJAL-1833 modified tooltip to force wraping of long...
2015-08-17 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-08-17 gmungocJAL-1800 separated SearchResults.getCharacters() from...
2015-08-17 gmungocJAL-1270 testIsMappable added
2015-08-17 gmungocJAL-1805 corrected javadoc only
2015-08-17 tcofoegbumerge
2015-08-17 tcofoegbuJAL-1832 improvement to enable result update only when...
2015-08-17 gmungocJAL-1829 JAL-1830 refactoring for correct mapping ...
2015-08-17 gmungocJAL-1800 smarter matching when following mouseover...
2015-08-17 gmungocJAL-1691 scan full width and depth of alignment for...
2015-08-17 gmungocJAL-1800 SearchResults.equals() to allow smarter mouseo...
2015-08-17 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-08-17 gmungocJAL-1551 updated to reflect changes to Eclipse preferen...
2015-08-17 gmungocJAL-1551 properties sorted (unchanged) for ease of...
2015-08-17 tcofoegbuJAL-1831 update all maxItems annotation to the max...
2015-08-14 tcofoegbumerge
2015-08-14 tcofoegbuJAL-1831 added changes to allow auto-generation of...
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