2022-02-03 |
Jim Procter | JAL-2305 comments re testFindXrefSequences_withFetch... |
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2022-01-29 |
Ben Soares | JAL-3830 JAL-3420 added new jvl_file to install4j9... |
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2022-01-29 |
Ben Soares | Merge branch 'develop' into improvement/JAL-3830_instal... |
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2022-01-28 |
Ben Soares | Merge branch 'develop' into improvement/JAL-3420_match_... |
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2022-01-28 |
Ben Soares | new jvl_file svg, png, ico and icns files, and changed... |
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2022-01-28 |
Jim Procter | JAL-3137 tests are for linux only |
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2022-01-28 |
Jim Procter | Merge branch 'merge/develop_JAL-3725' into develop |
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2022-01-27 |
Jim Procter | Merge branch 'bug/JAL-3633_read_proxy_settings_from_jal... |
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2022-01-26 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_2_Branch |
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2022-01-26 |
Jim Procter | JAL-3763 (for whatever reason) need to increase timeout... |
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2022-01-26 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_2_Branch |
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2022-01-26 |
Jim Procter | JAL-3746 note about adding JAL-3700,JAL-3751,JAL-3763... |
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2022-01-26 |
Jim Procter | Merge branch 'merge/develop_task/JAL-3763_newDatasetFor... |
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2022-01-26 |
Jim Procter | JAL-3763 (for whatever reason) need to increase timeout... merge/develop_task/JAL-3763_newDatasetForCds |
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2022-01-26 |
Jim Procter | Merge branch 'task/JAL-3763_newDatasetForCds' into... |
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2022-01-26 |
gmungoc | JAL-3806 (2.11.2 version) more lax allowance (3 positio... |
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2022-01-26 |
Jim Procter | JAL-3806 JAL-3725 propagate relaxed criteria for stop... |
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2022-01-26 |
gmungoc | JAL-3725 restrict mapped virtual feature location to... |
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2022-01-26 |
gmungoc | JAL-3725 helper methods for computing mapped feature... |
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2022-01-26 |
gmungoc | JAL-3725 exclude stop codon from CDS-to-protein mapping |
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2022-01-26 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_2_Branch |
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2022-01-26 |
Jim Procter | Merge branch 'releases/Release_2_11_1_Branch' |
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2022-01-18 |
Jim Procter | JAL-3940 update 2.11.2 release notes for 2.11.1.7 patch... |
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2022-01-18 |
Jim Procter | JAL-3940 errant heading in release notes.. releases/Release_2_11_1_Branch Release_2_11_1_7 |
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2022-01-18 |
Jim Procter | Merge branch 'patch/r2_11_1_branch_JAL-3703_closing_fil... |
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2022-01-17 |
Jim Procter | JAL-3703 patch Windows save file test for 2.11.1 codebase patch/r2_11_1_branch_JAL-3703_closing_files |
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2022-01-17 |
Jim Procter | Merge branch 'patch/r2_11_1_branch_JAL-3703_closing_fil... |
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2022-01-17 |
Jim Procter | JAL-3940 fix issues in release notes |
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2022-01-17 |
Jim Procter | JAL-3940 update 2.11.2 release notes for 2.11.1.7 patch... |
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2022-01-17 |
Jim Procter | JAL-3940 bump version and update release notes - releas... |
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2022-01-17 |
Jim Procter | JAL-3940 update release notes for JAL-3702,JAL-3935... |
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2022-01-17 |
Ben Soares | JAL-3703 Test that fails in Windows only, and only... |
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2022-01-17 |
Ben Soares | JAL-3703 fix Gff3 shared InputStream with embedded... |
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2022-01-17 |
Ben Soares | close filehandles straight after parse, without setting... |
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2022-01-17 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_2_Branch |
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2022-01-17 |
Jim Procter | JAL-3746 possible release date 1st Feb 2022 |
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2022-01-17 |
Jim Procter | JAL-3746 Release notes for patch JAL-3702 JAL-3915 |
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2022-01-17 |
Jim Procter | Merge branch 'bug/JAL-3703_saving_a_file_in_Windows_10_... |
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2022-01-12 |
Ben Soares | JAL-3703 Test that fails in Windows only, and only... |
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2022-01-11 |
Ben Soares | JAL-3703 fix Gff3 shared InputStream with embedded... |
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2022-01-11 |
Ben Soares | close filehandles straight after parse, without setting... |
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2022-01-11 |
Ben Soares | JAL-3937 update releases.html |
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2022-01-10 |
Ben Soares | JAL-3937 enable AIA download of intermediate certificat... |
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2022-01-10 |
Ben Soares | JAL-3937 enable AIA download of intermediate certificat... |
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2022-01-06 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_2_Branch |
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2022-01-06 |
Jim Procter | JAL-3746 update release history for 2.11.1.5 and 2... |
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2022-01-06 |
Jim Procter | JAL-3934 update whats new Release_2_11_1_6 |
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2022-01-06 |
Jim Procter | Merge branch 'critical/JAL-3933_log4j_update_for_develo... |
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2022-01-06 |
Jim Procter | Merge branch 'task/JAL-3934_update_log4j_again' into... |
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2022-01-06 |
Jim Procter | JAL-3934 trigger patch release for log4j version bump |
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2021-12-22 |
Ben Soares | Merge branch 'develop' into critical/JAL-3933_log4j_upd... |
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2021-12-22 |
Ben Soares | JAL-3934 updated log4j from 2.16.0 to 2.17.0 |
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2021-12-22 |
Ben Soares | JAL-3934 updated log4j from 2.16.0 to 2.17.0 |
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2021-12-22 |
Jim Procter | Merge branch 'releases/Release_2_11_1_Branch' |
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2021-12-20 |
Jim Procter | JAL-3842 remove replacement tokens in html text - not... Release_2_11_1_5 |
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2021-12-20 |
Jim Procter | JAL-3842 patch what’s new text |
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2021-12-20 |
Jim Procter | JAL-3842 release 2.11.1.5 release notes |
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2021-12-20 |
Jim Procter | Merge branch 'critical/JAL-3933_log4shell_mitigation... |
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2021-12-15 |
Ben Soares | JAL-3933 updated THIRDPARTYLIBS |
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2021-12-15 |
Ben Soares | JAL-3933 updated THIRDPARTYLIBS |
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2021-12-15 |
Ben Soares | JAL-3933 updated THIRDPARTYLIBS |
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2021-12-15 |
Ben Soares | JAL-3933 updated THIRDPARTYLIBS |
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2021-12-15 |
Jim Procter | JAL-3933 remove obsolete Castor logging configuration |
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2021-12-15 |
Jim Procter | JAL-3933 configure root logger console appender to... |
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2021-12-15 |
Jim Procter | JAL-3933 remove obsolete Castor logging configuration |
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2021-12-15 |
Jim Procter | JAL-3933 configure root logger console appender to... |
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2021-12-14 |
Ben Soares | JAL-3933 updated log4j and slf4j jars with log4j1.2... |
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2021-12-14 |
Ben Soares | JAL-3933 updated slf4j to 1.7.32 |
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2021-12-14 |
Ben Soares | JAL-3933 Updated log4j jars with log4j-2.16.0 and compa... |
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2021-12-13 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_2_Branch |
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2021-12-13 |
Jim Procter | JAL-3829 isCanonical should by default be false - ensur... |
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2021-12-13 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_2_Branch |
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2021-12-13 |
Jim Procter | JAL-3855 JAL-3829 don’t need to make up alphafold model... |
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2021-12-13 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_2_Branch |
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2021-12-13 |
Jim Procter | JAL-3929 preserve lowercase pdbid in group name for... |
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2021-12-08 |
Jim Procter | Merge branch 'to_merge/r2_11_2/JAL-3904_improved_alignp... |
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2021-12-08 |
Jim Procter | JAL-3551 pymol docs - work in progress |
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2021-12-08 |
Jim Procter | JAL-3929 don’t use the url encoded pdbId in feature... |
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2021-12-08 |
Jim Procter | JAL-3616 update messages/tooltips/menu items to use... |
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2021-12-08 |
Jim Procter | JAL-3551 JAL-3931 view pymol commands/responses in... |
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2021-12-08 |
Jim Procter | JAL-3931 remove % and - from ids so Pymol doesn’t strip... |
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2021-12-08 |
Jim Procter | JAL-3929 URLencode pdbid to remove problematic characte... |
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2021-12-07 |
Ben Soares | JAL-3930 Added a customizedId="JALVIEW" to launcher... |
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2021-12-07 |
Ben Soares | JAL-3930 Added a customizedId="JALVIEW" to launcher... |
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2021-12-02 |
Jim Procter | JAL-3904 use new AlignPanel API method |
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2021-12-02 |
Jim Procter | JAL-3904 simple method to make an alignPanel the curren... |
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2021-11-29 |
Ben Soares | JAL-3594 correct Jalview Develop logo SVG added in... |
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2021-11-25 |
Ben Soares | JAL-3553 added filesize to json |
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2021-11-19 |
Jim Procter | JAL-3926 disable autosearch by default |
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2021-11-19 |
Ben Soares | JAL-3553 now creating a json file for use on website... |
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2021-11-16 |
Ben Soares | JAL-3553 copy sha256sums to a versioned filename too... |
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2021-11-16 |
Ben Soares | JAL-3553 added customized labels for install4j output.txt |
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2021-11-16 |
Ben Soares | JAL-3553 improve the labels in install4j's output.txt... |
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2021-11-08 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_2_Branch |
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2021-11-08 |
Jim Procter | JAL-3855 verify pdb suffix is preserved when locally... |
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2021-11-08 |
Jim Procter | JAL-3855 JAL-1731 reuse the StructureViewer.fetchPdbFil... |
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2021-11-08 |
Jim Procter | JAL-3855 try harder to ignore DNA/RNA only structures... |
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2021-11-08 |
Jim Procter | JAL-3921 wait around until session file has been written |
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2021-11-05 |
Jim Procter | Merge branch 'develop' into releases/Release_2_11_2_Branch |
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2021-11-05 |
Jim Procter | JAL-3829 remove duplicate IDs in 3DBeacons generated... |
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next |