binaries/src/ViennaRNA/doc/latex/stringdist_8h.tex

   1 \hypertarget{stringdist_8h}{\section{/home/asherstnev/\-Projects/\-Java.projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/stringdist.h File Reference}
   2 \label{stringdist_8h}\index{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/stringdist.\-h@{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/stringdist.\-h}}
   3 }
   4
   5
   6 Functions for String Alignment.
   7
   8
   9 Include dependency graph for stringdist.\-h\-:
  10 \nopagebreak
  11 \begin{figure}[H]
  12 \begin{center}
  13 \leavevmode
  14 \includegraphics[width=250pt]{stringdist_8h__incl}
  15 \end{center}
  16 \end{figure}
  17 \subsection*{Functions}
  18 \begin{DoxyCompactItemize}
  19 \item
  20 \hyperlink{structswString}{sw\-String} $\ast$ \hyperlink{stringdist_8h_a3125991b3a403b3f89230474deb3f22e}{Make\-\_\-sw\-String} (char $\ast$string)
  21 \begin{DoxyCompactList}\small\item\em Convert a structure into a format suitable for \hyperlink{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{string\-\_\-edit\-\_\-distance()}. \end{DoxyCompactList}\item
  22 float \hyperlink{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{string\-\_\-edit\-\_\-distance} (\hyperlink{structswString}{sw\-String} $\ast$T1, \hyperlink{structswString}{sw\-String} $\ast$T2)
  23 \begin{DoxyCompactList}\small\item\em Calculate the string edit distance of T1 and T2. \end{DoxyCompactList}\end{DoxyCompactItemize}
  24
  25
  26 \subsection{Detailed Description}
  27 Functions for String Alignment.
  28
  29 \subsection{Function Documentation}
  30 \hypertarget{stringdist_8h_a3125991b3a403b3f89230474deb3f22e}{\index{stringdist.\-h@{stringdist.\-h}!Make\-\_\-sw\-String@{Make\-\_\-sw\-String}}
  31 \index{Make\-\_\-sw\-String@{Make\-\_\-sw\-String}!stringdist.h@{stringdist.\-h}}
  32 \subsubsection[{Make\-\_\-sw\-String}]{\setlength{\rightskip}{0pt plus 5cm}{\bf sw\-String}$\ast$ Make\-\_\-sw\-String (
  33 \begin{DoxyParamCaption}
  34 \item[{char $\ast$}]{string}
  35 \end{DoxyParamCaption}
  36 )}}\label{stringdist_8h_a3125991b3a403b3f89230474deb3f22e}
  37
  38
  39 Convert a structure into a format suitable for \hyperlink{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{string\-\_\-edit\-\_\-distance()}.
  40
  41
  42 \begin{DoxyParams}{Parameters}
  43 {\em string} & \\
  44 \hline
  45 \end{DoxyParams}
  46 \begin{DoxyReturn}{Returns}
  47
  48 \end{DoxyReturn}
  49 \hypertarget{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{\index{stringdist.\-h@{stringdist.\-h}!string\-\_\-edit\-\_\-distance@{string\-\_\-edit\-\_\-distance}}
  50 \index{string\-\_\-edit\-\_\-distance@{string\-\_\-edit\-\_\-distance}!stringdist.h@{stringdist.\-h}}
  51 \subsubsection[{string\-\_\-edit\-\_\-distance}]{\setlength{\rightskip}{0pt plus 5cm}float string\-\_\-edit\-\_\-distance (
  52 \begin{DoxyParamCaption}
  53 \item[{{\bf sw\-String} $\ast$}]{T1, }
  54 \item[{{\bf sw\-String} $\ast$}]{T2}
  55 \end{DoxyParamCaption}
  56 )}}\label{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}
  57
  58
  59 Calculate the string edit distance of T1 and T2.
  60
  61
  62 \begin{DoxyParams}{Parameters}
  63 {\em T1} & \\
  64 \hline
  65 {\em T2} & \\
  66 \hline
  67 \end{DoxyParams}
  68 \begin{DoxyReturn}{Returns}
  69
  70 \end{DoxyReturn}