JWS-112 Bumping version of ClustalO (src, binaries and windows) to version 1.2.4.
[jabaws.git] / binaries / src / clustalo / src / clustal / .deps / pair_dist.Plo
1 pair_dist.lo: pair_dist.c ../../src/config.h /usr/include/stdlib.h \
2  /usr/include/features.h /usr/include/sys/cdefs.h \
3  /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
4  /usr/include/gnu/stubs-64.h \
5  /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
6  /usr/include/bits/waitflags.h /usr/include/bits/waitstatus.h \
7  /usr/include/endian.h /usr/include/bits/endian.h \
8  /usr/include/bits/byteswap.h /usr/include/xlocale.h \
9  /usr/include/sys/types.h /usr/include/bits/types.h \
10  /usr/include/bits/typesizes.h /usr/include/time.h \
11  /usr/include/sys/select.h /usr/include/bits/select.h \
12  /usr/include/bits/sigset.h /usr/include/bits/time.h \
13  /usr/include/sys/sysmacros.h /usr/include/bits/pthreadtypes.h \
14  /usr/include/alloca.h /usr/include/ctype.h /usr/include/assert.h \
15  ../../src/clustal-omega.h \
16  /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/omp.h \
17  /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdbool.h \
18  ../../src/clustal-omega-config.h ../../src/hhalign/general.h \
19  ../../src/hhalign/../clustal/log.h /usr/include/stdio.h \
20  /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
21  /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
22  /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
23  /usr/include/bits/stdio.h ../../src/hhalign/hhfunc.h \
24  ../../src/clustal/log.h ../../src/clustal/util.h \
25  /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
26  /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
27  /usr/include/limits.h /usr/include/bits/posix1_lim.h \
28  /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
29  /usr/include/bits/posix2_lim.h /usr/include/bits/xopen_lim.h \
30  /usr/include/string.h /usr/include/bits/string.h \
31  /usr/include/bits/string2.h /usr/include/strings.h \
32  ../../src/clustal/symmatrix.h ../../src/clustal/seq.h \
33  ../../src/squid/squid.h /usr/include/math.h /usr/include/bits/huge_val.h \
34  /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
35  /usr/include/bits/inf.h /usr/include/bits/nan.h \
36  /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
37  /usr/include/bits/mathinline.h /usr/include/unistd.h \
38  /usr/include/bits/posix_opt.h /usr/include/bits/environments.h \
39  /usr/include/bits/confname.h /usr/include/getopt.h ../../src/squid/msa.h \
40  ../../src/squid/gki.h ../../src/squid/ssi.h ../../src/squid/squid.h \
41  ../../src/squid/sqfuncs.h ../../src/squid/sre_random.h \
42  ../../src/squid/vectorops.h ../../src/clustal/util.h \
43  ../../src/clustal/tree.h ../../src/clustal/symmatrix.h \
44  ../../src/clustal/muscle_tree.h ../../src/clustal/seq.h \
45  ../../src/clustal/mbed.h ../../src/clustal/weights.h \
46  ../../src/clustal/pair_dist.h ../../src/clustal/hhalign_wrapper.h \
47  ktuple_pair.h seq.h symmatrix.h progress.h ../../src/squid/stopwatch.h \
48  /usr/include/sys/times.h pair_dist.h util.h
49
50 ../../src/config.h:
51
52 /usr/include/stdlib.h:
53
54 /usr/include/features.h:
55
56 /usr/include/sys/cdefs.h:
57
58 /usr/include/bits/wordsize.h:
59
60 /usr/include/gnu/stubs.h:
61
62 /usr/include/gnu/stubs-64.h:
63
64 /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h:
65
66 /usr/include/bits/waitflags.h:
67
68 /usr/include/bits/waitstatus.h:
69
70 /usr/include/endian.h:
71
72 /usr/include/bits/endian.h:
73
74 /usr/include/bits/byteswap.h:
75
76 /usr/include/xlocale.h:
77
78 /usr/include/sys/types.h:
79
80 /usr/include/bits/types.h:
81
82 /usr/include/bits/typesizes.h:
83
84 /usr/include/time.h:
85
86 /usr/include/sys/select.h:
87
88 /usr/include/bits/select.h:
89
90 /usr/include/bits/sigset.h:
91
92 /usr/include/bits/time.h:
93
94 /usr/include/sys/sysmacros.h:
95
96 /usr/include/bits/pthreadtypes.h:
97
98 /usr/include/alloca.h:
99
100 /usr/include/ctype.h:
101
102 /usr/include/assert.h:
103
104 ../../src/clustal-omega.h:
105
106 /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/omp.h:
107
108 /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdbool.h:
109
110 ../../src/clustal-omega-config.h:
111
112 ../../src/hhalign/general.h:
113
114 ../../src/hhalign/../clustal/log.h:
115
116 /usr/include/stdio.h:
117
118 /usr/include/libio.h:
119
120 /usr/include/_G_config.h:
121
122 /usr/include/wchar.h:
123
124 /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h:
125
126 /usr/include/bits/stdio_lim.h:
127
128 /usr/include/bits/sys_errlist.h:
129
130 /usr/include/bits/stdio.h:
131
132 ../../src/hhalign/hhfunc.h:
133
134 ../../src/clustal/log.h:
135
136 ../../src/clustal/util.h:
137
138 /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h:
139
140 /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h:
141
142 /usr/include/limits.h:
143
144 /usr/include/bits/posix1_lim.h:
145
146 /usr/include/bits/local_lim.h:
147
148 /usr/include/linux/limits.h:
149
150 /usr/include/bits/posix2_lim.h:
151
152 /usr/include/bits/xopen_lim.h:
153
154 /usr/include/string.h:
155
156 /usr/include/bits/string.h:
157
158 /usr/include/bits/string2.h:
159
160 /usr/include/strings.h:
161
162 ../../src/clustal/symmatrix.h:
163
164 ../../src/clustal/seq.h:
165
166 ../../src/squid/squid.h:
167
168 /usr/include/math.h:
169
170 /usr/include/bits/huge_val.h:
171
172 /usr/include/bits/huge_valf.h:
173
174 /usr/include/bits/huge_vall.h:
175
176 /usr/include/bits/inf.h:
177
178 /usr/include/bits/nan.h:
179
180 /usr/include/bits/mathdef.h:
181
182 /usr/include/bits/mathcalls.h:
183
184 /usr/include/bits/mathinline.h:
185
186 /usr/include/unistd.h:
187
188 /usr/include/bits/posix_opt.h:
189
190 /usr/include/bits/environments.h:
191
192 /usr/include/bits/confname.h:
193
194 /usr/include/getopt.h:
195
196 ../../src/squid/msa.h:
197
198 ../../src/squid/gki.h:
199
200 ../../src/squid/ssi.h:
201
202 ../../src/squid/squid.h:
203
204 ../../src/squid/sqfuncs.h:
205
206 ../../src/squid/sre_random.h:
207
208 ../../src/squid/vectorops.h:
209
210 ../../src/clustal/util.h:
211
212 ../../src/clustal/tree.h:
213
214 ../../src/clustal/symmatrix.h:
215
216 ../../src/clustal/muscle_tree.h:
217
218 ../../src/clustal/seq.h:
219
220 ../../src/clustal/mbed.h:
221
222 ../../src/clustal/weights.h:
223
224 ../../src/clustal/pair_dist.h:
225
226 ../../src/clustal/hhalign_wrapper.h:
227
228 ktuple_pair.h:
229
230 seq.h:
231
232 symmatrix.h:
233
234 progress.h:
235
236 ../../src/squid/stopwatch.h:
237
238 /usr/include/sys/times.h:
239
240 pair_dist.h:
241
242 util.h: