binaries/src/jpred/tests/res_d16vpa_.align

   1 >QUERY
   2 SRMPSPPMPVPPAALFNRLLDDLGFSAGPALCTMLDTWNEDLFSALPTNADLYRECKFLSTLPSDVVEWGDA
   3 YVPERTQIDIRAHGDVAFPTLPATRDGLGLYYEALSRFFHAELRAREESYRTVLANFCSALYRYLRASVRQL
   4 HRQAHMRGRDRDLGEMLRATIADRYYRETARLARVLFLHLYLFLTREILWAAYAEQMMRPDLFDCLCCDLES
   5 WRQLAGLFQPFMFVNGALTVRGVPIEARRLRELNHIREHLNLPLVRSAATEEPGAPLTTPPTLHGNQARASG
   6 YFMVLIRAKLDSYSSFTTSPSEAVMREHAYSRAPTKNNYGSTIEGLLDLPDDDAPEEAGLAAPRLSFL
   7 >UniRef90_Q00028
   8 -----PPKATSPTALYQRLQAELGFPEGQAMLFAMEKWNEDMFSAIPVHVDLYTEIALLSTSVNEVVKAGLD
   9 SLPIPTEVDLNAHGSEPFPEVPALEDELETYVISAQRFYLSELRAREEHYSRLLRGYCVALLHYLYGSAKRQ
  10 LRGA---GSDSALMHKFKQVVRDRYYRETANLARLLYLHLYISVTREVSWRLHASQVVNQGIFVSLHYTWPQ
  11 RRKFECLFHPVLFNHGVVILENDPLEFNDLQRINYRRRELGLPLIRAGLIEEENLPLESEPTFSGKLPRTIG
  12 FLTHQIRTKMEAYSNAHPSTPLFPLAEHSYSRIDGRLSYGTTAEAMMDPPSPSA--------------
  13 >UniRef90_Q8B635
  14 -----PIKASSPSSLIKNLLDELNFPEGPSLLSSMEKWNEDLFSCIPRFLEIYIENSILSTSVDEVIKNLDN
  15 SLNYDDVIDFQVHGPETFPKTPLLEEELENYVTSVQKYFLSELKAREVTYSFLLTKYCKALLLYLRYNTKSS
  16 IKG------NKDINQKFKQNVRERYYREVANIARLLYLHLYLSVTREVSWKLHADQVLLQSVFVSLSYSWSH
  17 RRQFECIFHPILFNHGIVNLENNPLTFKELQKINYRRHILGLPLIRAGLVEEDNQPLMIPPEFSSKLPRTIG
  18 FLTQQIRAKMEAYSDNHPVTPKFPRIEHSYAKPIDPINYGTTIEAMMDPPSPSA--------------
  19 >UniRef90_Q9E205
  20 -----PPRVASPAVLYQQLINDLHFSEGPRIIALLETCNEDIFSCFPLNEDLYTDTIVFSTNPSDIIELETS
  21 ETPE--PINLITKG-CDLPSLPSTYTELPMYVENVQNTFFTELRVREKAYLRLLILYCKSLLRHLQGISRRS
  22 SVGARSQDCEHKYITQFKQSIRLRYYREVAKLARLLYLHLYITVTRQFSWRLFAQQSKYPDVFAAMKFMWLE
  23 NRQFTCAFHPILCNHGIVLLEGKPLSSQRLREVNYRRRQLGLPLVRCALIEEKGVPLVQRPEFSAHMPRSLG
  24 FLTHHIKAKLDVYSSKHSQEPGNVRVDHPYARNVNNINYGSSVEAMIVSPPSPS--------------
  25 >UniRef90_Q88530
  26 --LPSPE-AASPNLLYDRLILELDFAEGPSLLAKLERVNVDLFSCLPLNSHLYKHAKILSTCPREVLDAVYE
  27 NTWQYTALNLNEHGKSSIPPVPASKDDLPAYVTAVQEFYLEELEAREQIYAKLFFGYCRALIMHIIKSV--L
  28 NESRGVRVSDDYVQNKARWYISNNYYRDAVRIAKLLYLHLYLSTTEIVSQRLEAMQTSLQDLFVYLRCEWGQ
  29 GRQFWCIFQPMIYNHGVPMIEGRALTSLELGSSNYIRSELGLPLIRCELLEELESPVVFPPTFTATAPRSSG
  30 YLFHNIRAKMELYSNIHPSPQLSGLSDHTYVRTHVPVNYGTTVEVLLDASDPDS--------------
  31 >UniRef90_B4XS08
  32 ------------------------FPEASTILSTFELMNMDLFSCLPRNEDLYRNAALLSGSVTEVIEA--S
  33 EIPIDGEIDLNAHGSKQLPIPPSNEWEIPNYVEAVQQFFLSELRAREESYLKLFLGYCRAIVNYIKSAATRG
  34 VRGCRIMDRKSEANKRMRRMIADRYYREAARLAKVLYLHLYLSVAREISSRLCATQMQVQNVFVYMRYEWQQ
  35 YRQFTCLFHPIMFNHGVVLLNGEPLQAQKLREVNYIRFKLGLPVIRCGLVEEHDKPLVEEPRFYGNLPRSSG
  36 FLTELIRSKMEAYSELRPTSPSSISNDHTYAKQLDKVNFGSTREAILDTIDTEGP-------------
  37 >UniRef90_P09265
  38 ---PSPPWVASPKILYQQLIRDLDFSEGPRLLSCLETWNEDLFSCFPINEDLYSDMMVLSPDPDDVI----S
  39 TVSTKDHVNLTTRGSVRLPSPPKQPTGLPAYVQEVQDSFTVELRAREEAYTKLLVTYCKSIIRYLQGTAKRT
  40 TIGLNIQNPDQKAYTQLRQSILLRYYREVASLARLLYLHLYLTVTREFSWRLYASQSAHPDVFAALKFTWTE
  41 RRQFTCAFHPVLCNHGIVLLEGKPLTASALREINYRRRELGLPLVRCGLVEENKSPLVQQPSFSVHLPRSVG
  42 FLTHHIKRKLDAYAVKHPQEPRHVRADHPYAKVVENRNYGSSIEAMILAP--PSPSE-----------
  43 >UniRef90_Q2QBC8
  44 ------------AALYNRLLEDLGFGDGPALCTILDSWNEDLFSGLPANPDLYRECRFLSTLPGDVVVWGDA
  45 HAPDRGPIDIRAHGSAPFPSLPARREGLPAYCEALTRFFHSELRAREESYRRVLANFCSALYRYLRASTRQL
  46 HRQAALKGRPRDLQEMLRAAVAERYYRETARLARVLFLHLYLFLVREILWAVYAEQVMRQDLFEGLRCDLEQ
  47 ARQLSCLFQPLLFVHGALSVGGEPVSPARLRELNHVRERLNLPLIRSAATEEPGAALTAAPALQTQRARSSG
  48 YFMTLIRVKLDAYSEWSAGSEGAVLREHAYSRRRERTNYGSSIEGLLEL-------------------
  49 >UniRef90_Q90603
  50 ---------------YTRLLHELDFVEGPSILARLEKINVDLFSCFPHNKHLYEHAKILSVSPSEVLEELSK
  51 NTWTYTALNLNEHGEVALPMPPTTKADLPSYVDDIQNFYLGELEAREKSYATMFYGYCRALAEYIRQSAIKD
  52 LRDA--RVEDKNIGACSKARQYIAERYYREAFANVLYVHLYLSTTRDVSQRLEASQMGRQNIFVYLKCEWLQ
  53 ERHFHCLFQPVIFNHGVVIVEGRVLTAPELRAQNYIRSEFGLPLIRCKLVEEPDMPLISPPPFSGDAPRASV
  54 YLLQCIRSKLEVYSSHPPNPQLHVHKEHVHQKLESPPNYGTTVEALLMDSSD----------------
  55 >UniRef90_O89246
  56 --------------------HELDFTEGPSLLSRLEKLNVDLFSCFPINGHLYEHATLLSVSPSEVLDAASE
  57 EKWAYTAINLNEHCGMEVPRPPLTKDGLPVYVTEIQKFFSMELEAREKSYVTLLCGYCRALACYLRQGANEP
  58 SRCDMCVGGS----ETPRRSIAGAYYREAARFARLLYMHLYLSVTRDVSRRLEASQRKRQNLFAHLRCDWHQ
  59 LRHFQCLFQPVIFNHGVVIVEGRALTAAELRTQNYVRSELGLPVMRCELVEERGMPLTAPPAFLANAPRASA
  60 YLFQCIKSKLEVYSLMHPPRPRSSARGESGRAGKAGPSHGTIVKAMLRDSTHPGPAIADIAAAR----
  61 >UniRef90_Q5PP87
  62 ----------SPDALYQRLISDLAFDEGPALLGAMERWNEDLFSCLPGNEDLYARLVMLSASADEVAAQVRA
  63 PTADAS-VDLGVPGAEPMPRVPAVEEELPAYVAAVERFFVSTLRAREERYARLLDAYCRAVLRYLHAQARRD
  64 -------------EGKLRQLVRGRYYRDVARLAPWLFLHLYVATARELSWRLHADQVVAQDVFMSLRYEWDQ
  65 ARQLTCLFHPVLFNHGVVLLSGAPVPAAQLRAVNHRRRELGLPLVRAGLIEEDGADLVEEPPFSAALPRAAG
  66 YLSHQVRIKMEAYS--------REYRDHTYCRPPSPVSYG----------------------------
  67 >UniRef90_Q65819
  68 ----------------ERMQAELGFPDGPALLRAMERWNEDLFSCLPTNADLYADAALLSADADAVVGAMYL
  69 AVPDAERLDLNAHANQPLPAPPASEEGLPEYVAGVQAHFLAELRAREERYAGLFLGYCRALLQHLRA----T
  70 AARGRGAAGAGAQADRLRQLVAARYYREASRLARLAFAHMYVATAREVSWRLHSQQSQAQGVFVSLYYAWPQ
  71 RRQFTCLFHPVLFNHGVVALEDGFLDAAELRRLNYRRRELGLPLVRAGLVEVEVGPLVEEPPFSGSLPRALG
  72 FLNYQVRAKMGAPAE--AGGRLAPEREHSYARPRGAINYGTTPEAMLRPPSPS---------------
  73 >UniRef90_O56869
  74 -RNPGPPALVSASFLAKNALTELQFADWDKIQHVLKTINIDIFSCVPVGENGLCNMDWFSLDTEKIWTLMDS
  75 GTPNVSPNLLITPGPP--PECIKTPEEAPAYFEAISNYFESVLAAREAEYAKLLAEYAKSLAKYIRHKSQKV
  76 GR--GLRALELDTEEAKKRLMKSEYYKGIEKLLIIFLVHLVLNACRDVARIIWVQQRDSSSVLQKVTYRWES
  77 -QQLHCIFQPLLVSPGPVFLDNDPLPLQTLQHVNYVRYLLGVPVLRFSMIEESPSAQYIP----YDKTAPSA
  78 YDVLATIAR----TCLTSSGCSRASHDHTYARDNEKPNYSSSRIVLLADSALDTP-------------