binaries/src/mafft/test/sample.gins1

   1 >     1== M63632   1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91]
   2 --------------------MNGTE--GDNFYVPFSNKTG--LARSP-------------
   3 -------------------------------YEYPQY-YLAEPW----------------
   4 ------KYSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLF
   5 G-FTVTMYTSMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN
   6 F-RFGNTHAIMGVAFTWIMALAC-AAPPLVG-WS-----RYIPEGMQCSCGPDYYTLNPN
   7 FNNESYVVYMFVVHFLVPFVIIFFCYGRLLCTVKEAAAAQQESA----------------
   8 ------------------------------------------------------------
   9 ------------------------------------------------------------
  10 -----STQKAEKEVTRMVVLMVIGFLVCWVPYASVAFYIFT--HQGSD-FGATFMTLPAF
  11 FAKSSALYNPVIYILMNKQFRNCMITTL-----CCGKNPLGDDE-SG-ASTSKTEVSSVS
  12 T-----------------------------------------------------------
  13 -----------------------------------SPV-------SP-A
  14 >     2== U22180   1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94]
  15 --------------------MNGTE--GPNFYVPFSNITG--VVRSP-------------
  16 -------------------------------FEQPQY-YLAEPW----------------
  17 ------QFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFG
  18 G-FTTTLYTSLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN
  19 F-RFGENHAIMGVAFTWVMALAC-AAPPLVG-WS-----RYIPEGMQCSCGIDYYTLKPE
  20 VNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESA----------------
  21 ------------------------------------------------------------
  22 ------------------------------------------------------------
  23 -----TTQKAEKEVTRMVIIMVIFFLICWLPYASVAMYIFT--HQGSN-FGPIFMTLPAF
  24 FAKTASIYNPIIYIMMNKQFRNCMLTSL-----CCGKNPLGDDE-AS-ATASKTE-----
  25 T-----------------------------------------------------------
  26 -----------------------------------SQV-------AP-A
  27 >     3== M92038   1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9
  28 --------------------MNGTE--GINFYVPMSNKTG--VVRSP-------------
  29 -------------------------------FEYPQY-YLAEPW----------------
  30 ------KYRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACF
  31 G-FTVTFYTAWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN
  32 F-RFSATHAMMGIAFTWVMAFSC-AAPPLFG-WS-----RYMPEGMQCSCGPDYYTHNPD
  33 YHNESYVLYMFVIHFIIPVVVIFFSYGRLICKVREAAAQQQESA----------------
  34 ------------------------------------------------------------
  35 ------------------------------------------------------------
  36 -----TTQKAEKEVTRMVILMVLGFMLAWTPYAVVAFWIFT--NKGAD-FTATLMAVPAF
  37 FSKSSSLYNPIIYVLMNKQFRNCMITTI-----CCGKNPFGDEDVSSTVSQSKTEVSSVS
  38 S-----------------------------------------------------------
  39 -----------------------------------SQV-------SP-A
  40 >     4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish
  41 --------------------MNGTE--GKNFYVPMSNRTG--LVRSP-------------
  42 -------------------------------FEYPQY-YLAEPW----------------
  43 ------QFKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCF
  44 G-FTVTFYTAIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS
  45 F-KFSSSHAFAGIAFTWVMALAC-AAPPLFG-WS-----RYIPEGMQCSCGPDYYTLNPD
  46 YNNESYVIYMFVCHFILPVAVIFFTYGRLVCTVKAAAAQQQDSA----------------
  47 ------------------------------------------------------------
  48 ------------------------------------------------------------
  49 -----STQKAEREVTKMVILMVFGFLIAWTPYATVAAWIFF--NKGAD-FSAKFMAIPAF
  50 FSKSSALYNPVIYVLLNKQFRNCMLTTI-----FCGKNPLGDDE-SSTVSTSKTEVSS--
  51 ------------------------------------------------------------
  52 -------------------------------------V-------SP-A
  53 >     5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish
  54 --------------------MNGTE--GNNFYVPLSNRTG--LVRSP-------------
  55 -------------------------------FEYPQY-YLAEPW----------------
  56 ------QFKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCF
  57 G-FTVTFYTAIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS
  58 F-KFSSTHASAGIAFTWVMAMAC-AAPPLVG-WS-----RYIPEGIQCSCGPDYYTLNPE
  59 YNNESYVLYMFICHFILPVTIIFFTYGRLVCTVKAAAAQQQDSA----------------
  60 ------------------------------------------------------------
  61 ------------------------------------------------------------
  62 -----STQKAEREVTKMVILMVLGFLVAWTPYATVAAWIFF--NKGAA-FSAQFMAIPAF
  63 FSKTSALYNPVIYVLLNKQFRSCMLTTL-----FCGKNPLGDEE-SSTVSTSKTEVSS--
  64 ------------------------------------------------------------
  65 -------------------------------------V-------SP-A
  66 >     6== L11864   1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208-
  67 --------------------MKQVPEFHEDFYIPIPLDINNLSAYSP-------------
  68 -------------------------------FLVPQD-HLGNQG----------------
  69 ------IFMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIF
  70 G-SPLSFYSFFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN
  71 F-TFKTPHAIAGCILPWISALAA-SLPPLFG-WS-----RYIPEGLQCSCGPDWYTTNNK
  72 YNNESYVMFLFCFCFAVPFGTIVFCYGQLLITLKLAAKAQADSA----------------
  73 ------------------------------------------------------------
  74 ------------------------------------------------------------
  75 -----STQKAEREVTKMVVVMVLGFLVCWAPYASFSLWIVS--HRGEE-FDLRMATIPSC
  76 LSKASTVYNPVIYVLMNKQFRSCMM-KM-----VCGKN-IEEDE-AS-TSSQVTQVSS--
  77 ------------------------------------------------------------
  78 -------------------------------------V-------APEK
  79 >     7== M13299   1 human BCP <>[Science232(4747),193-202'86]
  80 --------------------MRKMS--EEEFYL-FKNISS----VGP-------------
  81 -------------------------------WDGPQY-HIAPVW----------------
  82 ------AFYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIF
  83 S-VFPVFVASCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN
  84 F-RFSSKHALTVVLATWTIGIGV-SIPPFFG-WS-----RFIPEGLQCSCGPDWYTVGTK
  85 YRSESYTWFLFIFCFIVPLSLICFSYTQLLRALKAVAAQQQESA----------------
  86 ------------------------------------------------------------
  87 ------------------------------------------------------------
  88 -----TTQKAEREVSRMVVVMVGSFCVCYVPYAAFAMYMVN--NRNHG-LDLRLVTIPSF
  89 FSKSACIYNPIIYCFMNKQFQACIM-KM-----VCGKA-MTDES-DT-CSSQKTEVSTVS
  90 S-----------------------------------------------------------
  91 -----------------------------------TQV-------GP-N
  92 >     8=opsin, greensensitive  human (fragment) S07060
  93 ------------------------------------------------------------
  94 ------------------------------------------------------------
  95 -----------------------------------------------------DLAETVI
  96 A-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN
  97 V-RFDAKLAIVGIAFSWIWAAVW-TAPPIFG-WS-----RYWPHGLKTSCGPDVFSGSSY
  98 PGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAIRAVAKQQKESE----------------
  99 ------------------------------------------------------------
 100 ------------------------------------------------------------
 101 -----STQKAEKEVTRMVVVMVLAFC----------------------------------
 102 ------------------------------------------------------------
 103 ------------------------------------------------------------
 104 -------------------------------------------------
 105 >     9== K03494   1 human GCP <>[Science232(4747),193-202'86]
 106 MAQQWS-LQRLAGRHPQDSYEDSTQ--SSIFTYTNSNST-----RGP-------------
 107 -------------------------------FEGPNY-HIAPRW----------------
 108 ------VYHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVI
 109 A-STISVVNQVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN
 110 V-RFDAKLAIVGIAFSWIWAAVW-TAPPIFG-WS-----RYWPHGLKTSCGPDVFSGSSY
 111 PGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAIRAVAKQQKESE----------------
 112 ------------------------------------------------------------
 113 ------------------------------------------------------------
 114 -----STQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAA--NPGYP-FHPLMAALPAF
 115 FAKSATIYNPVIYVFMNRQFRNCILQLF-------GKKVDDGSE-LS--SASKTEVSSV-
 116 ------------------------------------------------------------
 117 -----------------------------------SSV-------SP-A
 118 >    10== Z68193   1 human Red Opsin <>[]
 119 MAQQWS-LQRLAGRHPQDSYEDSTQ--SSIFTYTNSNST-----RGP-------------
 120 -------------------------------FEGPNY-HIAPRW----------------
 121 ------VYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVI
 122 A-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN
 123 V-RFDAKLAIVGIAFSWIWSAVW-TAPPIFG-WS-----RYWPHGLKTSCGPDVFSGSSY
 124 PGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESE----------------
 125 ------------------------------------------------------------
 126 ------------------------------------------------------------
 127 -----STQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAA--NPGYA-FHPLMAALPAY
 128 FAKSATIYNPVIYVFMNRQFRNCILQLF-------GKKVDDGSE-LS--SASKTEVSSV-
 129 ------------------------------------------------------------
 130 -----------------------------------SSV-------SP-A
 131 >    11== M92036   1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92]
 132 MTEAWNVAVFAARRSRDD--DDTTR--GSVFTYTNTNNT-----RGP-------------
 133 -------------------------------FEGPNY-HIAPRW----------------
 134 ------VYNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLV
 135 A-STISVFNQIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN
 136 I-KFDSKLAIIGIVFSWVWAWGW-SAPPIFG-WS-----RYWPHGLKTSCGPDVFSGSVE
 137 LGCQSFMLTLMITCCFLPLFIIIVCYLQVWMAIRAVAAQQKESE----------------
 138 ------------------------------------------------------------
 139 ------------------------------------------------------------
 140 -----STQKAEREVSRMVVVMIVAFCICWGPYASFVSFAAA--NPGYA-FHPLAAALPAY
 141 FAKSATIYNPVIYVFMNRQFRNCIMQLF-------GKKVDDGSE-AS--TTSRTEVSSVS
 142 N-----------------------------------------------------------
 143 -----------------------------------SSV-------AP-A
 144 >    12== M62903   1 chicken visual pigment <>[BBRC173,1212-1217'90]
 145 MA-AWE-AAFAARRRHEE--EDTTR--DSVFTYTNSNNT-----RGP-------------
 146 -------------------------------FEGPNY-HIAPRW----------------
 147 ------VYNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVI
 148 A-STISVINQIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN
 149 I-KFDGKLAVAGILFSWLWSCAW-TAPPIFG-WS-----RYWPHGLKTSCGPDVFSGSSD
 150 PGVQSYMVVLMVTCCFFPLAIIILCYLQVWLAIRAVAAQQKESE----------------
 151 ------------------------------------------------------------
 152 ------------------------------------------------------------
 153 -----STQKAEKEVSRMVVVMIVAYCFCWGPYTFFACFAAA--NPGYA-FHPLAAALPAY
 154 FAKSATIYNPIIYVFMNRQFRNCILQLF-------GKKVDDGSE-VS--T-SRTEVSSVS
 155 N-----------------------------------------------------------
 156 -----------------------------------SSV-------SP-A
 157 >    13== S75720   1 chicken P-opsin <>[Science267(5203),1502-1506'95]
 158 ------------------------M--SSNSSQAPPNGT-----PGP-------------
 159 -------------------------------FDGPQWPYQAPQS----------------
 160 ------TYVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLC
 161 G-SSVSLSNNIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD
 162 F-QFQRRHAVSGCAFTWGWALLW-SAPPLLG-WS-----SYVPEGLRTSCGPNWYTGGSN
 163 --NNSYILSLFVTCFVLPLSLILFSYTNLLLTLRAAAAQQKEAD----------------
 164 ------------------------------------------------------------
 165 ------------------------------------------------------------
 166 -----TTQRAEREVTRMVIVMVMAFLLCWLPYSTFALVVAT--HKGII-IQPVLASLPSY
 167 FSKTATVYNPIIYVFMNKQFQSCLLEML-----CCGYQPQRTGK-AS--PGTPGPHADVT
 168 A-----------------------------------------------------------
 169 -----------------------------------AGLRNKVMPAHP-V
 170 >    14== M17718   1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87]
 171 MESGNVSSSLFGNVSTALRPE----ARLSA---E---TRLLGWNVPP-------------
 172 -------------------------------EELR---HIPEHWLTYPE-----------
 173 --PPESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK
 174 --TPIFIYNSFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG
 175 --KMTHGKAIAMIIFIYMYATPW-VVACYTETWG-----RFVPEGYLTSCTFDYLTDN--
 176 FDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKMNVESLR-------
 177 ------------------------------------------------------------
 178 ------------------------------------------------------------
 179 SNVDKNKETAEIRIAKAAITICFLFFCSWTPYGVMSLIGAF--GDKTL-LTPGATMIPAC
 180 ACKMVACIDPFVYAISHPRYRMELQKRCPWL--ALNEKAPESSA----VASTST---TQE
 181 P-----------------------------------------------------------
 182 -----------------------------------QQT-------TA-A
 183 >    15== X65879   1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92
 184 MEYHNVSSVL-GNVSSVLRPD----ARLSA---E---SRLLGWNVPP-------------
 185 -------------------------------DELR---HIPEHWLIYPE-----------
 186 --PPESMNYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK
 187 --TPIFIYNSFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG
 188 --KMTHGKAIAMIIFIYLYATPW-VVACYTESWG-----RFVPEGYLTSCTFDYLTDN--
 189 FDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKMNVDSLR-------
 190 ------------------------------------------------------------
 191 ------------------------------------------------------------
 192 SNVDKSKEAAEIRIAKAAITICFLFFASWTPYGVMSLIGAF--GDKTL-LTPGATMIPAC
 193 TCKMVACIDPFVYAISHPRYRMELQKRCPWL--AISEKAPESRA----AISTST---TQE
 194 Q-----------------------------------------------------------
 195 -----------------------------------QQT-------TA-A
 196 >    16== M17730   1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87]
 197 ME------PLCNASEPPLRPE----AR-SSGNGD---LQFLGWNVPP-------------
 198 -------------------------------DQIQ---YIPEHWLTQLE-----------
 199 --PPASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK
 200 --APIF--NSFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR
 201 --NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFWD-----RFVPEGYLTSCSFDYLSDN--
 202 FDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKKMNVESLR-------
 203 ------------------------------------------------------------
 204 ------------------------------------------------------------
 205 SNVDKSKETAEIRIAKAAITICFLFFVSWTPYGVMSLIGAF--GDKSL-LTQGATMIPAC
 206 TCKLVACIDPFVYAISHPRYRLELQKRCPWL--GVNEKSGEISS----AQSTTT---QEQ
 207 ------------------------------------------------------------
 208 -----------------------------------QQT-------TA-A
 209 >    17== X65880   1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92
 210 MD------ALCNASEPPLRPE----ARMSSGSDE---LQFLGWNVPP-------------
 211 -------------------------------DQIQ---YIPEHWLTQLE-----------
 212 --PPASMHYMLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK
 213 --APIFIYNSFH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR
 214 --NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFWD-----RFVPEGYLTSCSFDYLSDN--
 215 FDTRLFVGTIFLFSFVVPTLMILYYYSQIVGHVFNHEKALREQAKKMNVESLR-------
 216 ------------------------------------------------------------
 217 ------------------------------------------------------------
 218 SNVDKSKETAEIRIAKAAITICFLFFVSWTPYGVMSLIGAF--GDKSL-LTPGATMIPAC
 219 TCKLVACIEPFVYAISHPRYRMELQKRCPWL--GVNEKSGEASS----AQSTTT---QEQ
 220 T-----------------------------------------------------------
 221 -----------------------------------QQT-------SA-A
 222 >    18== D50584   1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1
 223 MT-----------NATGPQMAYYGAASMDFGYPE---GVSIVDFVRP-------------
 224 -------------------------------EIKP---YVHQHWYNYPP-----------
 225 --VNPMWHYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTT
 226 N-VPFFTYNCFSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNG
 227 P-KLTTGKAVVFALISWVIAIGC-ALPPFFG-WG-----NYILEGILDSCSYDYLTQD--
 228 FNTFSYNIFIFVFDYFLPAAIIVFSYVFIVKAIFAHEAAMRAQAKKMNVSTLR-------
 229 ------------------------------------------------------------
 230 ------------------------------------------------------------
 231 S-NEADAQRAEIRIAKTALVNVSLWFICWTPYALISLKGVM--GDTSG-ITPLVSTLPAL
 232 LAKSCSCYNPFVYAISHPKYRLAITQHLPWF--CVHETETKSND----DSQSNS---TVA
 233 Q-----------------------------------------------------------
 234 ---------------------------------------------DK-A
 235 >    19== D50583   1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1
 236 MA-----------NVTGPQMAFYGSGAATFGYPE---GMTVADFVPD-------------
 237 -------------------------------RVKH---MVLDHWYNYPP-----------
 238 --VNPMWHYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTT
 239 N-FPPFCYNCFSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNG
 240 P-KLTQGKATFMCGLAWVISVGW-SLPPFFG-WG-----SYTLEGILDSCSYDYFTRD--
 241 MNTITYNICIFIFDFFLPASVIVFSYVFIVKAIFAHEAAMRAQAKKMNVTNLR-------
 242 ------------------------------------------------------------
 243 ------------------------------------------------------------
 244 S-NEAETQRAEIRIAKTALVNVSLWFICWTPYAAITIQGLL--GNAEG-ITPLLTTLPAL
 245 LAKSCSCYNPFVYAISHPKFRLAITQHLPWF--CVHEKDPNDVE----ENQSSN---TQT
 246 Q-----------------------------------------------------------
 247 ---------------------------------------------EK-S
 248 >    20== K02320   1 D.melanogaster opsin <>[Cell40,851-858'85]
 249 ME-----SFAVAAAQLGPHFA-----PLS--------NGSVVDKVTP-------------
 250 -------------------------------DMAH---LISPYWNQFPA-----------
 251 --MDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMIT
 252 N-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG
 253 R-PMTIPLALGKM---------------------------YVPEGNLTSCGIDYLERD--
 254 WNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLR-------
 255 ------------------------------------------------------------
 256 ------------------------------------------------------------
 257 S-SEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGLF--KF-EG-LTPLNTIWGAC
 258 FAKSAACYNPIVYGISHPKYRLALKEKCPCC--VFGKVDDGKSS----DAQSQA-TASEA
 259 E-----------------------------------------------------------
 260 ---------------------------------------------SK-A
 261 >    21== K02315   1 D.melanogaster ninaE <>[Cell40,839-850'85]
 262 ME-----SFAVAAAQLGPHFA-----PLS--------NGSVVDKVTP-------------
 263 -------------------------------DMAH---LISPYWNQFPA-----------
 264 --MDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMIT
 265 N-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG
 266 R-PMTIPLALGKIAYIWFMSSIW-CLAPAFG-WS-----RYVPEGNLTSCGIDYLERD--
 267 WNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLR-------
 268 ------------------------------------------------------------
 269 ------------------------------------------------------------
 270 S-SEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGLF--KF-EG-LTPLNTIWGAC
 271 FAKSAACYNPIVYGISHPKYRLALKEKCPCC--VFGKVDDGKSS----DAQSQA-TASEA
 272 E-----------------------------------------------------------
 273 ---------------------------------------------SK-A
 274 >    22== X65877   1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204'
 275 MD-----SFAAVATQLGPQFA-----APS--------NGSVVDKVTP-------------
 276 -------------------------------DMAH---LISPYWDQFPA-----------
 277 --MDPIWAKILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMIT
 278 N-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG
 279 R-PMTIPLALGKIAYIWFMSTIWCCLAPVFG-WS-----RYVPEGNLTSCGIDYLERD--
 280 WNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLR-------
 281 ------------------------------------------------------------
 282 ------------------------------------------------------------
 283 S-SEDADKSAEGKLAKVALVTISLWFMAWTPYLVINCMGLF--KF-EG-LTPLNTIWGAC
 284 FAKSAACYNPIVYGISHPKYRLALKEKCPCC--VFGKVDDGKSS----EAQSQA-TTSEA
 285 E-----------------------------------------------------------
 286 ---------------------------------------------SK-A
 287 >    23== M12896   1 D.melanogaster Rh2 <>[Cell44,705-710'86]
 288 MERSHLPETPFDLAHSGPRFQ-----AQSSG------NGSVLDNVLP-------------
 289 -------------------------------DMAH---LVNPYWSRFAP-----------
 290 --MDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMAS
 291 Q-SPVMIINFYY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGING
 292 T-PMTIKTSIMKILFIWMMAVFW-TVMPLIG-WS-----AYVPEGNLTACSIDYMTRM--
 293 WNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLR-------
 294 ------------------------------------------------------------
 295 ------------------------------------------------------------
 296 S-SEDCDKSAEGKLAKVALTTISLWFMAWTPYLVICYFGLF--KI-DG-LTPLTTIWGAT
 297 FAKTSAVYNPIVYGISHPKYRIVLKEKCPMC--VFGNTDEPKPD----APASDTETTSEA
 298 D-----------------------------------------------------------
 299 ---------------------------------------------SK-A
 300 >    24== X65878   1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92
 301 MERSLLPEPPLAMALLGPRFE-----AQTGG------NRSVLDNVLP-------------
 302 -------------------------------DMAP---LVNPHWSRFAP-----------
 303 --MDPTMSKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMAS
 304 Q-SPVMIINFYY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGING
 305 T-PMTIKTSIMKIAFIWMMAVFW-TIMPLIG-WS-----SYVPEGNLTACSIDYMTRQ--
 306 WNPRSYLITYSLFVYYTPLFMICYSYWFIIATVAAHEKAMRDQAKKMNVKSLR-------
 307 ------------------------------------------------------------
 308 ------------------------------------------------------------
 309 S-SEDCDKSAENKLAKVALTTISLWFMAWTPYLIICYFGLF--KI-DG-LTPLTTIWGAT
 310 FAKTSAVYNPIVYGISHPNDRLVLKEKCPMC--VCGTTDEPKPD----APPSDTETTSEA
 311 E-----------------------------------------------------------
 312 ---------------------------------------------SK-D
 313 >    25== U26026   1 Apis mellifera long-wavelength rhodopsin <>[]
 314 MI-----------AVSGPSYE-----AFSYGGQARFNNQTVVDKVPP-------------
 315 -------------------------------DMLH---LIDANWYQYPP-----------
 316 --LNPMWHGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFC
 317 M-SPPMVINCYY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSG
 318 K-PLSINGALIRIIAIWLFSLGW-TIAPMFG-WN-----RYVPEGNMTACGTDYFNRG--
 319 LLSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKNMREQAKKMNVASLR-------
 320 ------------------------------------------------------------
 321 ------------------------------------------------------------
 322 S-SENQNTSAECKLAKVALMTISLWFMAWTPYLVINFSGIF--NL-VK-ISPLFTIWGSL
 323 FAKANAVYNPIVYGISHPKYRAALFAKFPSL--AC-AAEPSSDA----VSTTSG-TTTVT
 324 D-----------------------------------------------------------
 325 ----------------------------------NEK--------SN-A
 326 >    26== L03781   1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93]
 327 M-------------ANQLSYS-----SLGWPYQP---NASVVDTMPK-------------
 328 -------------------------------EMLY---MIHEHWYAFPP-----------
 329 --MNPLWYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAF
 330 M-MPTMTSNCFA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAA
 331 A-PLTHKKATLLLLFVWIWSGGW-TILPFFG-WS-----RYVPEGNLTSCTVDYLTKD--
 332 WSSASYVVIYGLAVYFLPLITMIYCYFFIVHAVAEHEKQLREQAKKMNVASLR-------
 333 ------------------------------------------------------------
 334 ------------------------------------------------------------
 335 ANADQQKQSAECRLAKVAMMTVGLWFMAWTPYLIISWAGVF--SSGTR-LTPLATIWGSV
 336 FAKANSCYNPIVYGISHPRYKAALYQRFPSL--ACGSGESGSDV----KSEASA-TTTME
 337 E-----------------------------------------------------------
 338 ----------------------------------KPKI-------PE-A
 339 >    27== X07797   1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88]
 340 MV-------------ESTTLV-----NQTWWY-----NPTV-------------------
 341 --------------------------------------DIHPHWAKFDP-----------
 342 --IPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAI
 343 NGFPLKTISAFM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAA
 344 SKKMSHRRAFLMIIFVWMWSIVW-SVGPVFN-WG-----AYVPEGILTSCSFDYLSTD--
 345 PSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKRLNAKELR-------
 346 ------------------------------------------------------------
 347 ------------------------------------------------------------
 348 K-AQ-AGASAEMKLAKISMVIITQFMLSWSPYAIIALLAQF--GPAEW-VTPYAAELPVL
 349 FAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQFDEKECED----ANDAEEEVVASE
 350 R--GGESRDAAQMKEMMAMMQKMQAQQAAYQP---PPPPQGYPPQGYPPQGAYPPPQGYP
 351 PQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQA-------YQ-A
 352 >    28== X70498   1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93]
 353 MG-------------RDLR-D-----NETWWY-----NPSI-------------------
 354 --------------------------------------VVHPHWREFDQ-----------
 355 --VPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLV
 356 NGFPLMTISCFL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAA
 357 SKKMSHRRAFIMIIFVWLWSVLW-AIGPIFG-WG-----AYTLEGVLCNCSFDYISRD--
 358 STTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELR-------
 359 ------------------------------------------------------------
 360 ------------------------------------------------------------
 361 K-AQ-AGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQF--GPLEW-VTPYAAQLPVM
 362 FAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETED----DKDAETEIPAGE
 363 SSDAAPSADAAQMKEMMAMMQKMQQQQAAYPPQGYAPPPQGYPPQGYPPQGY--PPQGYP
 364 PQGYPP---PPQGAPPQGAPP------AAPPQGVDNQA-------YQ-A
 365 >    29== L21195   1 human serotonin 5-HT7 receptor protein <placenta and fetal bra
 366 MMDVNSSGRPDLYGHLRSFLLPEVGRGLPDLSPDG-----------------GADPVAGS
 367 WAPHLLS------------------------EVTAS---PAPTW---DAPPDNASGCGEQ
 368 INYGRVEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVA
 369 V-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTY
 370 PVRQNGKCMAKMILSVWLLSASI-TLPPLFG-WA-----QNVNDDKVCLISQDF------
 371 ----GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF--------------PGFP
 372 RVEPDSVIALNG------------------------------------------------
 373 ----IVKLQKE------------------VEECAN------------------LSRLLKH
 374 ERKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTFLW
 375 LGYANSLINPFIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMHEALKLAERPERPEFV
 376 L-----------------------------------------------------------
 377 -----------------------------------QNADYCRKKGHD-S
 378 >    30== L15228   1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93]
 379 ------------------------------------------------------------
 380 -MPHLLSGFL---------------------EVTAS---PAPTW---DAPPDNVSGCGEQ
 381 INYGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVA
 382 V-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTY
 383 PVRQNGKCMAKMILSVWLLSASI-TLPPLFG-WA-----QNVNDDKVCLISQDF------
 384 ----GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF--------------PGFP
 385 RVQPESVISLNG------------------------------------------------
 386 ----VVKLQKE------------------VEECAN------------------LSRLLKH
 387 ERKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLW
 388 LGYANSLINPFIYAFFNRDLRPTSRSLLQCQYRNINRKLSAAGMHEALKLAERPERSEFV
 389 L-----------------------------------------------------------
 390 -----------------------------------QNSDHCGKKGHD-T
 391 >    31=p A47425 serotonin receptor 5HT-7 - rat
 392 ------------------------------------------------------------
 393 -MPHLLSGFL---------------------EVTAS---PAPTW---DAPPDNVSGCGEQ
 394 INYGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVA
 395 V-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTY
 396 PVRQNGKCMAKMILSVWLLSASI-TLPPLFG-WA-----QNVNDDKVCLISQDF------
 397 ----GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF--------------PGFP
 398 RVQPESVISLNG------------------------------------------------
 399 ----VVKLQKE------------------VEECAN------------------LSRLLKH
 400 ERKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLW
 401 LGYANSLINPFIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMHEALKLAERPERSEFV
 402 L-----------------------------------------------------------
 403 -----------------------------------QNSDHCGKKGHD-T
 404 >    32== M83181   1 human serotonin receptor <>[JBC267(11),7553-7562'92]
 405 MDVLSPG-----------------------------------------------------
 406 --------------------QGNNT------TSPPAPFETGGNTTGISD-----------
 407 --VTVSYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVL
 408 V-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDY
 409 VNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH------
 410 ----GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVKKVEKTGADTRHGASPAPQ
 411 PKK-----SVNG--ESGSRNWRLGVESKAGGALCANGAVRQGDDGAAL--EVIEVHRVGN
 412 SKEHLPLPSEAGPTPCAPAS------------------FERKNERNA-------------
 413 EAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-CESSCH-MPTLLGAIINW
 414 LGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKF----------------------------
 415 ------------------------------------------------------------
 416 -------------------------------------------CR---Q
 417 >    33=p A35181 serotonin receptor class 1A - rat
 418 MDVFSFG-----------------------------------------------------
 419 --------------------QGNNT------TASQEPFGTGGNVTSISD-----------
 420 --VTFSYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVL
 421 V-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDY
 422 VNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH------
 423 ----GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVRKVEKKGAGTSLGTSSAPP
 424 PKK-----SLNG--QPGSGDWRRCAENRAVGTPCTNGAVRQGDDEATL--EVIEVHRVGN
 425 SKEHLPLPSESGSNSYAPAC------------------LERKNERNA-------------
 426 EAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-CESSCH-MPALLGAIINW
 427 LGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKF----------------------------
 428 ------------------------------------------------------------
 429 -------------------------------------------CR---R
 430 >    34== L06803   1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93]
 431 MANFTFGDLALDVARMGGLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYGLTGQFINGS
 432 HSSRSRD-----------NASANDT------SATNM---TDDRYWSLTV-----------
 433 --YSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVL
 434 V-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDY
 435 IRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDPNN--DPDKTGTCIISQDK------
 436 ----GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASP
 437 KTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSS
 438 SSERLKQIQIETAEAFANGCAEEASIAMLERQCNNGKKISSNDTPYS-------------
 439 RTREKLELKRERKAARTLAIITGAFLICWLPFFIIALIGPF-VDPE-G-IPPFARSFVLW
 440 LGYFNSLLNPIIYTIFSPEFRSAFQKILFGKY----------------------------
 441 ------------------------------------------------------------
 442 -------------------------------------------RRGH-R
 443 >    35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail
 444 MANFTFGDLALDVARMGGLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYGLTGQFINGS
 445 HSSRSRD-----------NASANDT------SATNM---TDDRYWSLTV-----------
 446 --YSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVL
 447 V-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDY
 448 IRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDPNN--DPDKTGTCIISQDK------
 449 ----GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASP
 450 KTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSS
 451 SSERLKQIQIETAEAFANGCAEEASIAMLERQCNNGKKISSNDTPYS-------------
 452 RTREKLELKRERKAARTLAIITGAFLICWLPFFIIALIGPF-VDPE-G-IPPFARSFVLW
 453 LGYFNSLLNPIIYTIFSPEFRSAFQKILFGKY----------------------------
 454 ------------------------------------------------------------
 455 -------------------------------------------RRGH-R
 456 >    36== X95604   1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi
 457 M--------------------------------------------------------EGA
 458 EGQEELDWEALYLRLPLQNCSWNSTGWEPNWNVTVV---PNTTWWQASAPFDTP------
 459 --AALVRAAAKAVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACL
 460 V-MPLGAVYEVV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDY
 461 IHASTAKRVGMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQDV------
 462 ----GYQIFATASSFYVPVLIILILYWRIYQTARKRIRR------RRGATARGGVGPPPV
 463 PAG---------------------------------GALVAGGGSGGIAAAVVAV-----
 464 IGRPLPTISETTTTGFTNVSSNNTSPE--KQSCANGLEADPPTTGYGAVAAAYYPSLVRR
 465 KPKEAADSKRERKAAKTLAIITGAFVACWLPFFVLAILVPT-CD--CE-VSPVLTSLSLW
 466 LGYFNSTLNPVIYTVFSPEFRHAFQRLLCGRR----------------------------
 467 ------------------------------------------------------------
 468 ----------------------------------------VRRRRAP-Q