5 # generating the html pages
8 cp -r _build/html/* ../../website/docs/
10 #mkdir ../../jabaws-2.2-dev/docs
11 #cp -r _build/html/* ../../jabaws-2.2-dev/docs/
14 # # generating the pdf
16 # # manual edit to remove unecessary ines in the index page
17 # # also edit the author list to
18 ## add the following to the latex and change the date to match the release date
20 # \author{Peter Troshin \and Alexander Sherstnev \and Jim Procter \and Daniel Barton \and Fábio Madeira \and Alexey Drozdetskiy \and Suzanne Duce \and Geoffrey J. Barton}
24 # Division of Computational Biology
26 # School of Life Sciences
28 # University of Dundee
38 # # \begin{sphinxadmonition}{note}{Note:}
39 # # Some of the hyper-links found in this pdf might not work properly.
40 # # \end{sphinxadmonition}
41 # cp _build/latex/JABAWS.pdf ../../website/docs/jabaws_manual.pdf
44 # for multiple versions of this manual we need to implement some solution
45 # like this one https://robpol86.github.io/sphinxcontrib-versioning/index.html