webservices/compbio/ws/server/resource/AAConWS_schema1.xsd

   1 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
   2 <xs:schema version="1.0" targetNamespace="http://msa.data.compbio/01/12/2010/" xmlns:tns="http://msa.data.compbio/01/12/2010/" xmlns:xs="http://www.w3.org/2001/XMLSchema">
   3
   4   <xs:element name="JobSubmissionException" type="tns:JobSubmissionException"/>
   5
   6   <xs:element name="LimitExceededException" type="tns:LimitExceededException"/>
   7
   8   <xs:element name="ResultNotAvailableException" type="tns:ResultNotAvailableException"/>
   9
  10   <xs:element name="UnsupportedRuntimeException" type="tns:UnsupportedRuntimeException"/>
  11
  12   <xs:element name="WrongParameterException" type="tns:WrongParameterException"/>
  13
  14   <xs:element name="analize" type="tns:analize"/>
  15
  16   <xs:element name="analizeResponse" type="tns:analizeResponse"/>
  17
  18   <xs:element name="cancelJob" type="tns:cancelJob"/>
  19
  20   <xs:element name="cancelJobResponse" type="tns:cancelJobResponse"/>
  21
  22   <xs:element name="customAnalize" type="tns:customAnalize"/>
  23
  24   <xs:element name="customAnalizeResponse" type="tns:customAnalizeResponse"/>
  25
  26   <xs:element name="getAnnotation" type="tns:getAnnotation"/>
  27
  28   <xs:element name="getAnnotationResponse" type="tns:getAnnotationResponse"/>
  29
  30   <xs:element name="getJobStatus" type="tns:getJobStatus"/>
  31
  32   <xs:element name="getJobStatusResponse" type="tns:getJobStatusResponse"/>
  33
  34   <xs:element name="getLimit" type="tns:getLimit"/>
  35
  36   <xs:element name="getLimitResponse" type="tns:getLimitResponse"/>
  37
  38   <xs:element name="getLimits" type="tns:getLimits"/>
  39
  40   <xs:element name="getLimitsResponse" type="tns:getLimitsResponse"/>
  41
  42   <xs:element name="getPresets" type="tns:getPresets"/>
  43
  44   <xs:element name="getPresetsResponse" type="tns:getPresetsResponse"/>
  45
  46   <xs:element name="getRunnerOptions" type="tns:getRunnerOptions"/>
  47
  48   <xs:element name="getRunnerOptionsResponse" type="tns:getRunnerOptionsResponse"/>
  49
  50   <xs:element name="limits" type="tns:limitsManager"/>
  51
  52   <xs:element name="presetAnalize" type="tns:presetAnalize"/>
  53
  54   <xs:element name="presetAnalizeResponse" type="tns:presetAnalizeResponse"/>
  55
  56   <xs:element name="presets" type="tns:presetManager"/>
  57
  58   <xs:element name="pullExecStatistics" type="tns:pullExecStatistics"/>
  59
  60   <xs:element name="pullExecStatisticsResponse" type="tns:pullExecStatisticsResponse"/>
  61
  62   <xs:element name="runnerConfig" type="tns:runnerConfig"/>
  63
  64   <xs:complexType name="getJobStatus">
  65     <xs:sequence>
  66       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
  67     </xs:sequence>
  68   </xs:complexType>
  69
  70   <xs:complexType name="getJobStatusResponse">
  71     <xs:sequence>
  72       <xs:element name="return" type="tns:jobStatus" minOccurs="0"/>
  73     </xs:sequence>
  74   </xs:complexType>
  75
  76   <xs:complexType name="analize">
  77     <xs:sequence>
  78       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
  79     </xs:sequence>
  80   </xs:complexType>
  81
  82   <xs:complexType name="fastaSequence">
  83     <xs:sequence>
  84       <xs:element name="id" type="xs:string" minOccurs="0"/>
  85       <xs:element name="sequence" type="xs:string" minOccurs="0"/>
  86     </xs:sequence>
  87   </xs:complexType>
  88
  89   <xs:complexType name="analizeResponse">
  90     <xs:sequence>
  91       <xs:element name="return" type="xs:string" minOccurs="0"/>
  92     </xs:sequence>
  93   </xs:complexType>
  94
  95   <xs:complexType name="UnsupportedRuntimeException">
  96     <xs:sequence>
  97       <xs:element name="message" type="xs:string" minOccurs="0"/>
  98     </xs:sequence>
  99   </xs:complexType>
 100
 101   <xs:complexType name="LimitExceededException">
 102     <xs:sequence>
 103       <xs:element name="actualNumberofSequences" type="xs:int"/>
 104       <xs:element name="message" type="xs:string" minOccurs="0"/>
 105       <xs:element name="numberOfSequencesAllowed" type="xs:int"/>
 106       <xs:element name="sequenceLenghtActual" type="xs:int"/>
 107       <xs:element name="sequenceLenghtAllowed" type="xs:int"/>
 108     </xs:sequence>
 109   </xs:complexType>
 110
 111   <xs:complexType name="JobSubmissionException">
 112     <xs:sequence>
 113       <xs:element name="message" type="xs:string" minOccurs="0"/>
 114     </xs:sequence>
 115   </xs:complexType>
 116
 117   <xs:complexType name="getRunnerOptions">
 118     <xs:sequence/>
 119   </xs:complexType>
 120
 121   <xs:complexType name="getRunnerOptionsResponse">
 122     <xs:sequence>
 123       <xs:element name="return" type="tns:runnerConfig" minOccurs="0"/>
 124     </xs:sequence>
 125   </xs:complexType>
 126
 127   <xs:complexType name="runnerConfig">
 128     <xs:sequence>
 129       <xs:element name="options" type="tns:option" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 130       <xs:element name="parameters" type="tns:parameter" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 131       <xs:element name="prmSeparator" type="xs:string" minOccurs="0"/>
 132       <xs:element name="runnerClassName" type="xs:string"/>
 133     </xs:sequence>
 134   </xs:complexType>
 135
 136   <xs:complexType name="option">
 137     <xs:sequence>
 138       <xs:element name="description" type="xs:string"/>
 139       <xs:element name="optionNames" type="xs:string" maxOccurs="unbounded"/>
 140       <xs:element name="name" type="xs:string"/>
 141       <xs:element name="furtherDetails" type="xs:anyURI" minOccurs="0"/>
 142       <xs:element name="defaultValue" type="xs:string" minOccurs="0"/>
 143     </xs:sequence>
 144     <xs:attribute name="isRequired" type="xs:boolean" use="required"/>
 145   </xs:complexType>
 146
 147   <xs:complexType name="parameter">
 148     <xs:complexContent>
 149       <xs:extension base="tns:option">
 150         <xs:sequence>
 151           <xs:element name="possibleValues" type="xs:string" minOccurs="0" maxOccurs="unbounded"/>
 152           <xs:element name="validValue" type="tns:valueConstrain" minOccurs="0"/>
 153         </xs:sequence>
 154       </xs:extension>
 155     </xs:complexContent>
 156   </xs:complexType>
 157
 158   <xs:complexType name="valueConstrain">
 159     <xs:sequence>
 160       <xs:element name="type" type="tns:type"/>
 161       <xs:element name="max" type="xs:string" minOccurs="0"/>
 162       <xs:element name="min" type="xs:string" minOccurs="0"/>
 163     </xs:sequence>
 164   </xs:complexType>
 165
 166   <xs:complexType name="presetAnalize">
 167     <xs:sequence>
 168       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 169       <xs:element name="preset" type="tns:preset" minOccurs="0"/>
 170     </xs:sequence>
 171   </xs:complexType>
 172
 173   <xs:complexType name="preset">
 174     <xs:sequence>
 175       <xs:element name="name" type="xs:string"/>
 176       <xs:element name="description" type="xs:string" minOccurs="0"/>
 177       <xs:element name="optlist" minOccurs="0">
 178         <xs:complexType>
 179           <xs:sequence>
 180             <xs:element name="option" type="xs:string" maxOccurs="unbounded"/>
 181           </xs:sequence>
 182         </xs:complexType>
 183       </xs:element>
 184     </xs:sequence>
 185   </xs:complexType>
 186
 187   <xs:complexType name="presetAnalizeResponse">
 188     <xs:sequence>
 189       <xs:element name="return" type="xs:string" minOccurs="0"/>
 190     </xs:sequence>
 191   </xs:complexType>
 192
 193   <xs:complexType name="WrongParameterException">
 194     <xs:sequence>
 195       <xs:element name="message" type="xs:string" minOccurs="0"/>
 196     </xs:sequence>
 197   </xs:complexType>
 198
 199   <xs:complexType name="getAnnotation">
 200     <xs:sequence>
 201       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 202     </xs:sequence>
 203   </xs:complexType>
 204
 205   <xs:complexType name="getAnnotationResponse">
 206     <xs:sequence>
 207       <xs:element name="return" type="tns:scoreManager" minOccurs="0"/>
 208     </xs:sequence>
 209   </xs:complexType>
 210
 211   <xs:complexType name="scoreManager">
 212     <xs:sequence>
 213       <xs:element name="seqScores" type="tns:scoreHolder" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 214     </xs:sequence>
 215   </xs:complexType>
 216
 217   <xs:complexType name="scoreHolder">
 218     <xs:sequence>
 219       <xs:element name="id" type="xs:string" minOccurs="0"/>
 220       <xs:element name="scores" type="tns:score" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 221     </xs:sequence>
 222   </xs:complexType>
 223
 224   <xs:complexType name="score">
 225     <xs:sequence>
 226       <xs:element name="method" type="xs:string" minOccurs="0"/>
 227       <xs:element name="ranges" type="tns:range" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 228       <xs:element name="scores" type="xs:float" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 229     </xs:sequence>
 230   </xs:complexType>
 231
 232   <xs:complexType name="range">
 233     <xs:sequence>
 234       <xs:element name="from" type="xs:int"/>
 235       <xs:element name="to" type="xs:int"/>
 236     </xs:sequence>
 237   </xs:complexType>
 238
 239   <xs:complexType name="ResultNotAvailableException">
 240     <xs:sequence>
 241       <xs:element name="message" type="xs:string" minOccurs="0"/>
 242     </xs:sequence>
 243   </xs:complexType>
 244
 245   <xs:complexType name="getLimits">
 246     <xs:sequence/>
 247   </xs:complexType>
 248
 249   <xs:complexType name="getLimitsResponse">
 250     <xs:sequence>
 251       <xs:element name="return" type="tns:limitsManager" minOccurs="0"/>
 252     </xs:sequence>
 253   </xs:complexType>
 254
 255   <xs:complexType name="limitsManager">
 256     <xs:sequence>
 257       <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
 258       <xs:element name="limit" type="tns:limit" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 259     </xs:sequence>
 260   </xs:complexType>
 261
 262   <xs:complexType name="limit">
 263     <xs:sequence>
 264       <xs:element name="preset" type="xs:string" minOccurs="0"/>
 265       <xs:element name="seqNumber" type="xs:int"/>
 266       <xs:element name="seqLength" type="xs:int"/>
 267     </xs:sequence>
 268     <xs:attribute name="isDefault" type="xs:boolean" use="required"/>
 269   </xs:complexType>
 270
 271   <xs:complexType name="getLimit">
 272     <xs:sequence>
 273       <xs:element name="presetName" type="xs:string" minOccurs="0"/>
 274     </xs:sequence>
 275   </xs:complexType>
 276
 277   <xs:complexType name="getLimitResponse">
 278     <xs:sequence>
 279       <xs:element name="return" type="tns:limit" minOccurs="0"/>
 280     </xs:sequence>
 281   </xs:complexType>
 282
 283   <xs:complexType name="getPresets">
 284     <xs:sequence/>
 285   </xs:complexType>
 286
 287   <xs:complexType name="getPresetsResponse">
 288     <xs:sequence>
 289       <xs:element name="return" type="tns:presetManager" minOccurs="0"/>
 290     </xs:sequence>
 291   </xs:complexType>
 292
 293   <xs:complexType name="presetManager">
 294     <xs:sequence>
 295       <xs:element name="runnerClassName" type="xs:string"/>
 296       <xs:element name="preset" type="tns:preset" maxOccurs="unbounded"/>
 297     </xs:sequence>
 298   </xs:complexType>
 299
 300   <xs:complexType name="cancelJob">
 301     <xs:sequence>
 302       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 303     </xs:sequence>
 304   </xs:complexType>
 305
 306   <xs:complexType name="cancelJobResponse">
 307     <xs:sequence>
 308       <xs:element name="return" type="xs:boolean"/>
 309     </xs:sequence>
 310   </xs:complexType>
 311
 312   <xs:complexType name="customAnalize">
 313     <xs:sequence>
 314       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 315       <xs:element name="options" type="tns:option" minOccurs="0" maxOccurs="unbounded"/>
 316     </xs:sequence>
 317   </xs:complexType>
 318
 319   <xs:complexType name="customAnalizeResponse">
 320     <xs:sequence>
 321       <xs:element name="return" type="xs:string" minOccurs="0"/>
 322     </xs:sequence>
 323   </xs:complexType>
 324
 325   <xs:complexType name="pullExecStatistics">
 326     <xs:sequence>
 327       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 328       <xs:element name="position" type="xs:long"/>
 329     </xs:sequence>
 330   </xs:complexType>
 331
 332   <xs:complexType name="pullExecStatisticsResponse">
 333     <xs:sequence>
 334       <xs:element name="return" type="tns:chunkHolder" minOccurs="0"/>
 335     </xs:sequence>
 336   </xs:complexType>
 337
 338   <xs:complexType name="chunkHolder">
 339     <xs:sequence>
 340       <xs:element name="chunk" type="xs:string" minOccurs="0"/>
 341       <xs:element name="position" type="xs:long"/>
 342     </xs:sequence>
 343   </xs:complexType>
 344
 345   <xs:simpleType name="jobStatus">
 346     <xs:restriction base="xs:string">
 347       <xs:enumeration value="PENDING"/>
 348       <xs:enumeration value="RUNNING"/>
 349       <xs:enumeration value="CANCELLED"/>
 350       <xs:enumeration value="FINISHED"/>
 351       <xs:enumeration value="FAILED"/>
 352       <xs:enumeration value="UNDEFINED"/>
 353       <xs:enumeration value="STARTED"/>
 354       <xs:enumeration value="SUBMITTED"/>
 355       <xs:enumeration value="COLLECTED"/>
 356     </xs:restriction>
 357   </xs:simpleType>
 358
 359   <xs:simpleType name="type">
 360     <xs:restriction base="xs:string">
 361       <xs:enumeration value="Integer"/>
 362       <xs:enumeration value="Float"/>
 363     </xs:restriction>
 364   </xs:simpleType>
 365 </xs:schema>
 366