website/tests/Ant suite/classes.html

   1 <table border='1'>
   2 <tr>
   3 <th>Class name</th>
   4 <th>Method name</th>
   5 <th>Groups</th>
   6 </tr><tr>
   7 <td>compbio.engine.client.CommandBuilderTester</td>
   8 <td>&nbsp;</td><td>&nbsp;</td></tr>
   9 <tr>
  10 <td align='center' colspan='3'>@Test</td>
  11 </tr>
  12 <tr>
  13 <td>&nbsp;</td>
  14 <td>testOptionsToCommand</td>
  15 <td>&nbsp;</td></tr>
  16 <tr>
  17 <td>&nbsp;</td>
  18 <td>testSpaceDelimiterExecutable</td>
  19 <td>&nbsp;</td></tr>
  20 <tr>
  21 <td>&nbsp;</td>
  22 <td>testCommandBuilding</td>
  23 <td>&nbsp;</td></tr>
  24 <tr>
  25 <td align='center' colspan='3'>@BeforeClass</td>
  26 </tr>
  27 <tr>
  28 <td align='center' colspan='3'>@BeforeMethod</td>
  29 </tr>
  30 <tr>
  31 <td align='center' colspan='3'>@AfterMethod</td>
  32 </tr>
  33 <tr>
  34 <td align='center' colspan='3'>@AfterClass</td>
  35 </tr>
  36 <tr>
  37 <td>compbio.metadata.RunnerConfigTester</td>
  38 <td>&nbsp;</td><td>&nbsp;</td></tr>
  39 <tr>
  40 <td align='center' colspan='3'>@Test</td>
  41 </tr>
  42 <tr>
  43 <td>&nbsp;</td>
  44 <td>testValidateUpperBoundaryConstrainCheck</td>
  45 <td>&nbsp;</td></tr>
  46 <tr>
  47 <td>&nbsp;</td>
  48 <td>testOptionSetInvalidValue</td>
  49 <td>&nbsp;</td></tr>
  50 <tr>
  51 <td>&nbsp;</td>
  52 <td>testValidateBoundaryConstrainCheck</td>
  53 <td>&nbsp;</td></tr>
  54 <tr>
  55 <td>&nbsp;</td>
  56 <td>testValidateValueConstrain</td>
  57 <td>&nbsp;</td></tr>
  58 <tr>
  59 <td>&nbsp;</td>
  60 <td>testCreateParameterWithValidValueConstrain</td>
  61 <td>&nbsp;</td></tr>
  62 <tr>
  63 <td>&nbsp;</td>
  64 <td>testValidateLowerBoundaryConstrainCheck</td>
  65 <td>&nbsp;</td></tr>
  66 <tr>
  67 <td>&nbsp;</td>
  68 <td>testOptionNoDefaultValidate</td>
  69 <td>&nbsp;</td></tr>
  70 <tr>
  71 <td>&nbsp;</td>
  72 <td>testCreateParameter</td>
  73 <td>&nbsp;</td></tr>
  74 <tr>
  75 <td>&nbsp;</td>
  76 <td>testOptionToCommand</td>
  77 <td>&nbsp;</td></tr>
  78 <tr>
  79 <td>&nbsp;</td>
  80 <td>testParameterToCommand</td>
  81 <td>&nbsp;</td></tr>
  82 <tr>
  83 <td>&nbsp;</td>
  84 <td>testCreateNumParameterWithoutValidValue</td>
  85 <td>&nbsp;</td></tr>
  86 <tr>
  87 <td>&nbsp;</td>
  88 <td>testValidate</td>
  89 <td>&nbsp;</td></tr>
  90 <tr>
  91 <td align='center' colspan='3'>@BeforeClass</td>
  92 </tr>
  93 <tr>
  94 <td align='center' colspan='3'>@BeforeMethod</td>
  95 </tr>
  96 <tr>
  97 <td>&nbsp;</td>
  98 <td>setup</td>
  99 <td>&nbsp;</td></tr>
 100 <tr>
 101 <td align='center' colspan='3'>@AfterMethod</td>
 102 </tr>
 103 <tr>
 104 <td align='center' colspan='3'>@AfterClass</td>
 105 </tr>
 106 <tr>
 107 <td>compbio.runner._impl.NetNglycTester</td>
 108 <td>&nbsp;</td><td>&nbsp;</td></tr>
 109 <tr>
 110 <td align='center' colspan='3'>@Test</td>
 111 </tr>
 112 <tr>
 113 <td>&nbsp;</td>
 114 <td>testGetTestCommand</td>
 115 <td>&nbsp;</td></tr>
 116 <tr>
 117 <td>&nbsp;</td>
 118 <td>testBuildCommand</td>
 119 <td>cluster runner </td>
 120 </tr>
 121 <tr>
 122 <td align='center' colspan='3'>@BeforeClass</td>
 123 </tr>
 124 <tr>
 125 <td align='center' colspan='3'>@BeforeMethod</td>
 126 </tr>
 127 <tr>
 128 <td align='center' colspan='3'>@AfterMethod</td>
 129 </tr>
 130 <tr>
 131 <td align='center' colspan='3'>@AfterClass</td>
 132 </tr>
 133 <tr>
 134 <td>compbio.runner.msa.MafftParametersTester</td>
 135 <td>&nbsp;</td><td>&nbsp;</td></tr>
 136 <tr>
 137 <td align='center' colspan='3'>@Test</td>
 138 </tr>
 139 <tr>
 140 <td>&nbsp;</td>
 141 <td>testConstrainedParametersMaxValues</td>
 142 <td>runner non_windows </td>
 143 </tr>
 144 <tr>
 145 <td>&nbsp;</td>
 146 <td>testConstrainedParametersRandomValues</td>
 147 <td>runner non_windows </td>
 148 </tr>
 149 <tr>
 150 <td>&nbsp;</td>
 151 <td>testConstrainedParametersMinValues</td>
 152 <td>runner non_windows </td>
 153 </tr>
 154 <tr>
 155 <td>&nbsp;</td>
 156 <td>testArguments</td>
 157 <td>runner non_windows </td>
 158 </tr>
 159 <tr>
 160 <td>&nbsp;</td>
 161 <td>testOptions</td>
 162 <td>runner non_windows </td>
 163 </tr>
 164 <tr>
 165 <td>&nbsp;</td>
 166 <td>testDefaultParameters</td>
 167 <td>runner non_windows </td>
 168 </tr>
 169 <tr>
 170 <td>&nbsp;</td>
 171 <td>testParameters</td>
 172 <td>runner non_windows </td>
 173 </tr>
 174 <tr>
 175 <td>&nbsp;</td>
 176 <td>testPresets</td>
 177 <td>runner non_windows </td>
 178 </tr>
 179 <tr>
 180 <td>&nbsp;</td>
 181 <td>testConfiguration</td>
 182 <td>&nbsp;</td></tr>
 183 <tr>
 184 <td align='center' colspan='3'>@BeforeClass</td>
 185 </tr>
 186 <tr>
 187 <td align='center' colspan='3'>@BeforeMethod</td>
 188 </tr>
 189 <tr>
 190 <td>&nbsp;</td>
 191 <td>setup</td>
 192 <td>runner non_windows </td>
 193 </tr>
 194 <tr>
 195 <td align='center' colspan='3'>@AfterMethod</td>
 196 </tr>
 197 <tr>
 198 <td align='center' colspan='3'>@AfterClass</td>
 199 </tr>
 200 <tr>
 201 <td>compbio.engine.EngineConfiguratorTester</td>
 202 <td>&nbsp;</td><td>&nbsp;</td></tr>
 203 <tr>
 204 <td align='center' colspan='3'>@Test</td>
 205 </tr>
 206 <tr>
 207 <td>&nbsp;</td>
 208 <td>testGetAsyncEngine</td>
 209 <td>&nbsp;</td></tr>
 210 <tr>
 211 <td>&nbsp;</td>
 212 <td>testGetSyncEngine</td>
 213 <td>&nbsp;</td></tr>
 214 <tr>
 215 <td align='center' colspan='3'>@BeforeClass</td>
 216 </tr>
 217 <tr>
 218 <td align='center' colspan='3'>@BeforeMethod</td>
 219 </tr>
 220 <tr>
 221 <td align='center' colspan='3'>@AfterMethod</td>
 222 </tr>
 223 <tr>
 224 <td align='center' colspan='3'>@AfterClass</td>
 225 </tr>
 226 <tr>
 227 <td>compbio.runner._impl.RonnTester</td>
 228 <td>&nbsp;</td><td>&nbsp;</td></tr>
 229 <tr>
 230 <td align='center' colspan='3'>@Test</td>
 231 </tr>
 232 <tr>
 233 <td>&nbsp;</td>
 234 <td>testGetTestCommand</td>
 235 <td>&nbsp;</td></tr>
 236 <tr>
 237 <td>&nbsp;</td>
 238 <td>testBuildCommand</td>
 239 <td>cluster runner </td>
 240 </tr>
 241 <tr>
 242 <td align='center' colspan='3'>@BeforeClass</td>
 243 </tr>
 244 <tr>
 245 <td align='center' colspan='3'>@BeforeMethod</td>
 246 </tr>
 247 <tr>
 248 <td align='center' colspan='3'>@AfterMethod</td>
 249 </tr>
 250 <tr>
 251 <td align='center' colspan='3'>@AfterClass</td>
 252 </tr>
 253 <tr>
 254 <td>compbio.runner.msa.ProbconsTester</td>
 255 <td>&nbsp;</td><td>&nbsp;</td></tr>
 256 <tr>
 257 <td align='center' colspan='3'>@Test</td>
 258 </tr>
 259 <tr>
 260 <td>&nbsp;</td>
 261 <td>testExecute</td>
 262 <td>runner non_windows </td>
 263 </tr>
 264 <tr>
 265 <td>&nbsp;</td>
 266 <td>testPersistance</td>
 267 <td>runner non_windows </td>
 268 </tr>
 269 <tr>
 270 <td>&nbsp;</td>
 271 <td>testClusterExecute</td>
 272 <td>cluster runner non_windows </td>
 273 </tr>
 274 <tr>
 275 <td>&nbsp;</td>
 276 <td>testSetInputTester</td>
 277 <td>runner non_windows </td>
 278 </tr>
 279 <tr>
 280 <td>&nbsp;</td>
 281 <td>testConfigurationLoading</td>
 282 <td>runner </td>
 283 </tr>
 284 <tr>
 285 <td>&nbsp;</td>
 286 <td>readStatistics</td>
 287 <td>runner non_windows </td>
 288 </tr>
 289 <tr>
 290 <td align='center' colspan='3'>@BeforeClass</td>
 291 </tr>
 292 <tr>
 293 <td align='center' colspan='3'>@BeforeMethod</td>
 294 </tr>
 295 <tr>
 296 <td>&nbsp;</td>
 297 <td>init</td>
 298 <td>cluster runner non_windows </td>
 299 </tr>
 300 <tr>
 301 <td align='center' colspan='3'>@AfterMethod</td>
 302 </tr>
 303 <tr>
 304 <td align='center' colspan='3'>@AfterClass</td>
 305 </tr>
 306 <tr>
 307 <td>compbio.engine.conf.PropertyHelperManagerTester</td>
 308 <td>&nbsp;</td><td>&nbsp;</td></tr>
 309 <tr>
 310 <td align='center' colspan='3'>@Test</td>
 311 </tr>
 312 <tr>
 313 <td>&nbsp;</td>
 314 <td>testClusterEngineConf</td>
 315 <td>cluster </td>
 316 </tr>
 317 <tr>
 318 <td>&nbsp;</td>
 319 <td>validateClustalConfiguration</td>
 320 <td>&nbsp;</td></tr>
 321 <tr>
 322 <td>&nbsp;</td>
 323 <td>validateTcoffeeConfiguration</td>
 324 <td>&nbsp;</td></tr>
 325 <tr>
 326 <td>&nbsp;</td>
 327 <td>validateMuscleConfiguration</td>
 328 <td>&nbsp;</td></tr>
 329 <tr>
 330 <td>&nbsp;</td>
 331 <td>validateMafftConfiguration</td>
 332 <td>&nbsp;</td></tr>
 333 <tr>
 334 <td align='center' colspan='3'>@BeforeClass</td>
 335 </tr>
 336 <tr>
 337 <td>&nbsp;</td>
 338 <td>testLoadResources</td>
 339 <td>&nbsp;</td></tr>
 340 <tr>
 341 <td align='center' colspan='3'>@BeforeMethod</td>
 342 </tr>
 343 <tr>
 344 <td align='center' colspan='3'>@AfterMethod</td>
 345 </tr>
 346 <tr>
 347 <td align='center' colspan='3'>@AfterClass</td>
 348 </tr>
 349 <tr>
 350 <td>compbio.engine.FilePullerTester</td>
 351 <td>&nbsp;</td><td>&nbsp;</td></tr>
 352 <tr>
 353 <td align='center' colspan='3'>@Test</td>
 354 </tr>
 355 <tr>
 356 <td>&nbsp;</td>
 357 <td>testGet</td>
 358 <td>&nbsp;</td></tr>
 359 <tr>
 360 <td>&nbsp;</td>
 361 <td>testCache</td>
 362 <td>engine </td>
 363 </tr>
 364 <tr>
 365 <td>&nbsp;</td>
 366 <td>testGetDelay</td>
 367 <td>engine </td>
 368 </tr>
 369 <tr>
 370 <td>&nbsp;</td>
 371 <td>testPull</td>
 372 <td>engine </td>
 373 </tr>
 374 <tr>
 375 <td align='center' colspan='3'>@BeforeClass</td>
 376 </tr>
 377 <tr>
 378 <td align='center' colspan='3'>@BeforeMethod</td>
 379 </tr>
 380 <tr>
 381 <td align='center' colspan='3'>@AfterMethod</td>
 382 </tr>
 383 <tr>
 384 <td align='center' colspan='3'>@AfterClass</td>
 385 </tr>
 386 <tr>
 387 <td>compbio.metadata.OptionCombinatorTester</td>
 388 <td>&nbsp;</td><td>&nbsp;</td></tr>
 389 <tr>
 390 <td align='center' colspan='3'>@Test</td>
 391 </tr>
 392 <tr>
 393 <td>&nbsp;</td>
 394 <td>testgetAllParameters</td>
 395 <td>&nbsp;</td></tr>
 396 <tr>
 397 <td>&nbsp;</td>
 398 <td>testgetAllOptions</td>
 399 <td>&nbsp;</td></tr>
 400 <tr>
 401 <td align='center' colspan='3'>@BeforeClass</td>
 402 </tr>
 403 <tr>
 404 <td align='center' colspan='3'>@BeforeMethod</td>
 405 </tr>
 406 <tr>
 407 <td>&nbsp;</td>
 408 <td>setup</td>
 409 <td>&nbsp;</td></tr>
 410 <tr>
 411 <td align='center' colspan='3'>@AfterMethod</td>
 412 </tr>
 413 <tr>
 414 <td align='center' colspan='3'>@AfterClass</td>
 415 </tr>
 416 <tr>
 417 <td>compbio.runner.msa.MuscleTester</td>
 418 <td>&nbsp;</td><td>&nbsp;</td></tr>
 419 <tr>
 420 <td align='center' colspan='3'>@Test</td>
 421 </tr>
 422 <tr>
 423 <td>&nbsp;</td>
 424 <td>testRunOnCluster</td>
 425 <td>cluster runner </td>
 426 </tr>
 427 <tr>
 428 <td>&nbsp;</td>
 429 <td>testRunOnClusterAsync</td>
 430 <td>cluster runner </td>
 431 </tr>
 432 <tr>
 433 <td>&nbsp;</td>
 434 <td>testPersistance</td>
 435 <td>runner </td>
 436 </tr>
 437 <tr>
 438 <td>&nbsp;</td>
 439 <td>testConfigurationLoading</td>
 440 <td>runner </td>
 441 </tr>
 442 <tr>
 443 <td>&nbsp;</td>
 444 <td>readStatistics</td>
 445 <td>runner </td>
 446 </tr>
 447 <tr>
 448 <td>&nbsp;</td>
 449 <td>testRunLocally</td>
 450 <td>runner </td>
 451 </tr>
 452 <tr>
 453 <td align='center' colspan='3'>@BeforeClass</td>
 454 </tr>
 455 <tr>
 456 <td align='center' colspan='3'>@BeforeMethod</td>
 457 </tr>
 458 <tr>
 459 <td>&nbsp;</td>
 460 <td>init</td>
 461 <td>&nbsp;</td></tr>
 462 <tr>
 463 <td align='center' colspan='3'>@AfterMethod</td>
 464 </tr>
 465 <tr>
 466 <td align='center' colspan='3'>@AfterClass</td>
 467 </tr>
 468 <tr>
 469 <td>compbio.runner.msa.TcoffeeTester</td>
 470 <td>&nbsp;</td><td>&nbsp;</td></tr>
 471 <tr>
 472 <td align='center' colspan='3'>@Test</td>
 473 </tr>
 474 <tr>
 475 <td>&nbsp;</td>
 476 <td>testExecute</td>
 477 <td>runner non_windows </td>
 478 </tr>
 479 <tr>
 480 <td>&nbsp;</td>
 481 <td>testPersistance</td>
 482 <td>cluster runner non_windows </td>
 483 </tr>
 484 <tr>
 485 <td>&nbsp;</td>
 486 <td>testNcore</td>
 487 <td>runner non_windows </td>
 488 </tr>
 489 <tr>
 490 <td>&nbsp;</td>
 491 <td>testClusterExecute</td>
 492 <td>cluster runner non_windows </td>
 493 </tr>
 494 <tr>
 495 <td>&nbsp;</td>
 496 <td>testConfigurationLoading</td>
 497 <td>runner </td>
 498 </tr>
 499 <tr>
 500 <td>&nbsp;</td>
 501 <td>readStatistics</td>
 502 <td>runner non_windows </td>
 503 </tr>
 504 <tr>
 505 <td align='center' colspan='3'>@BeforeClass</td>
 506 </tr>
 507 <tr>
 508 <td align='center' colspan='3'>@BeforeMethod</td>
 509 </tr>
 510 <tr>
 511 <td>&nbsp;</td>
 512 <td>init</td>
 513 <td>cluster runner non_windows </td>
 514 </tr>
 515 <tr>
 516 <td align='center' colspan='3'>@AfterMethod</td>
 517 </tr>
 518 <tr>
 519 <td align='center' colspan='3'>@AfterClass</td>
 520 </tr>
 521 <tr>
 522 <td>compbio.runner.msa.LimitTester</td>
 523 <td>&nbsp;</td><td>&nbsp;</td></tr>
 524 <tr>
 525 <td align='center' colspan='3'>@Test</td>
 526 </tr>
 527 <tr>
 528 <td>&nbsp;</td>
 529 <td>testLoadLimits</td>
 530 <td>&nbsp;</td></tr>
 531 <tr>
 532 <td align='center' colspan='3'>@BeforeClass</td>
 533 </tr>
 534 <tr>
 535 <td align='center' colspan='3'>@BeforeMethod</td>
 536 </tr>
 537 <tr>
 538 <td>&nbsp;</td>
 539 <td>setup</td>
 540 <td>runner </td>
 541 </tr>
 542 <tr>
 543 <td align='center' colspan='3'>@AfterMethod</td>
 544 </tr>
 545 <tr>
 546 <td align='center' colspan='3'>@AfterClass</td>
 547 </tr>
 548 <tr>
 549 <td>compbio.runner._impl.OBTester</td>
 550 <td>&nbsp;</td><td>&nbsp;</td></tr>
 551 <tr>
 552 <td align='center' colspan='3'>@Test</td>
 553 </tr>
 554 <tr>
 555 <td>&nbsp;</td>
 556 <td>testGetTestCommand</td>
 557 <td>&nbsp;</td></tr>
 558 <tr>
 559 <td>&nbsp;</td>
 560 <td>testBuildCommand</td>
 561 <td>cluster runner </td>
 562 </tr>
 563 <tr>
 564 <td>&nbsp;</td>
 565 <td>testGetTestArgsCommand</td>
 566 <td>&nbsp;</td></tr>
 567 <tr>
 568 <td align='center' colspan='3'>@BeforeClass</td>
 569 </tr>
 570 <tr>
 571 <td align='center' colspan='3'>@BeforeMethod</td>
 572 </tr>
 573 <tr>
 574 <td align='center' colspan='3'>@AfterMethod</td>
 575 </tr>
 576 <tr>
 577 <td align='center' colspan='3'>@AfterClass</td>
 578 </tr>
 579 <tr>
 580 <td>compbio.engine.local.AsyncLocalRunnerTester</td>
 581 <td>&nbsp;</td><td>&nbsp;</td></tr>
 582 <tr>
 583 <td align='center' colspan='3'>@Test</td>
 584 </tr>
 585 <tr>
 586 <td>&nbsp;</td>
 587 <td>testCancelLocally</td>
 588 <td>engine </td>
 589 </tr>
 590 <tr>
 591 <td>&nbsp;</td>
 592 <td>testMultipleCancelLocally</td>
 593 <td>engine </td>
 594 </tr>
 595 <tr>
 596 <td>&nbsp;</td>
 597 <td>testAsyncCancelOperation</td>
 598 <td>engine </td>
 599 </tr>
 600 <tr>
 601 <td>&nbsp;</td>
 602 <td>testAsyncRetrievOperation</td>
 603 <td>engine </td>
 604 </tr>
 605 <tr>
 606 <td>&nbsp;</td>
 607 <td>testSubmitLocally</td>
 608 <td>engine </td>
 609 </tr>
 610 <tr>
 611 <td>&nbsp;</td>
 612 <td>testCancelCompletedTaskLocally</td>
 613 <td>engine </td>
 614 </tr>
 615 <tr>
 616 <td>&nbsp;</td>
 617 <td>testGetStatus</td>
 618 <td>engine </td>
 619 </tr>
 620 <tr>
 621 <td align='center' colspan='3'>@BeforeClass</td>
 622 </tr>
 623 <tr>
 624 <td align='center' colspan='3'>@BeforeMethod</td>
 625 </tr>
 626 <tr>
 627 <td align='center' colspan='3'>@AfterMethod</td>
 628 </tr>
 629 <tr>
 630 <td align='center' colspan='3'>@AfterClass</td>
 631 </tr>
 632 <tr>
 633 <td>compbio.engine.local.LocalRunnerTester</td>
 634 <td>&nbsp;</td><td>&nbsp;</td></tr>
 635 <tr>
 636 <td align='center' colspan='3'>@Test</td>
 637 </tr>
 638 <tr>
 639 <td>&nbsp;</td>
 640 <td>testCancelLocally</td>
 641 <td>engine </td>
 642 </tr>
 643 <tr>
 644 <td>&nbsp;</td>
 645 <td>testMultipleCancelLocally</td>
 646 <td>engine </td>
 647 </tr>
 648 <tr>
 649 <td>&nbsp;</td>
 650 <td>testCancelCompletedTaskLocally</td>
 651 <td>engine </td>
 652 </tr>
 653 <tr>
 654 <td align='center' colspan='3'>@BeforeClass</td>
 655 </tr>
 656 <tr>
 657 <td align='center' colspan='3'>@BeforeMethod</td>
 658 </tr>
 659 <tr>
 660 <td align='center' colspan='3'>@AfterMethod</td>
 661 </tr>
 662 <tr>
 663 <td align='center' colspan='3'>@AfterClass</td>
 664 </tr>
 665 <tr>
 666 <td>compbio.runner._impl.Tmhmm2Tester</td>
 667 <td>&nbsp;</td><td>&nbsp;</td></tr>
 668 <tr>
 669 <td align='center' colspan='3'>@Test</td>
 670 </tr>
 671 <tr>
 672 <td>&nbsp;</td>
 673 <td>testGetTestCommand</td>
 674 <td>&nbsp;</td></tr>
 675 <tr>
 676 <td>&nbsp;</td>
 677 <td>testBuildCommand</td>
 678 <td>cluster runner </td>
 679 </tr>
 680 <tr>
 681 <td align='center' colspan='3'>@BeforeClass</td>
 682 </tr>
 683 <tr>
 684 <td align='center' colspan='3'>@BeforeMethod</td>
 685 </tr>
 686 <tr>
 687 <td align='center' colspan='3'>@AfterMethod</td>
 688 </tr>
 689 <tr>
 690 <td align='center' colspan='3'>@AfterClass</td>
 691 </tr>
 692 <tr>
 693 <td>compbio.runner.msa.MafftTester</td>
 694 <td>&nbsp;</td><td>&nbsp;</td></tr>
 695 <tr>
 696 <td align='center' colspan='3'>@Test</td>
 697 </tr>
 698 <tr>
 699 <td>&nbsp;</td>
 700 <td>testExecute</td>
 701 <td>runner non_windows </td>
 702 </tr>
 703 <tr>
 704 <td>&nbsp;</td>
 705 <td>testRunOnClusterAsyncCheckStatusShortPoolingTime</td>
 706 <td>cluster runner non_windows </td>
 707 </tr>
 708 <tr>
 709 <td>&nbsp;</td>
 710 <td>testPersistance</td>
 711 <td>runner non_windows </td>
 712 </tr>
 713 <tr>
 714 <td>&nbsp;</td>
 715 <td>testClusterExecute</td>
 716 <td>cluster runner non_windows </td>
 717 </tr>
 718 <tr>
 719 <td>&nbsp;</td>
 720 <td>testSetInputTester</td>
 721 <td>runner non_windows </td>
 722 </tr>
 723 <tr>
 724 <td>&nbsp;</td>
 725 <td>testConfigurationLoading</td>
 726 <td>runner </td>
 727 </tr>
 728 <tr>
 729 <td>&nbsp;</td>
 730 <td>readStatistics</td>
 731 <td>runner non_windows </td>
 732 </tr>
 733 <tr>
 734 <td>&nbsp;</td>
 735 <td>testRunOnClusterAsyncCheckStatusLongPoolingTime</td>
 736 <td>cluster runner non_windows </td>
 737 </tr>
 738 <tr>
 739 <td align='center' colspan='3'>@BeforeClass</td>
 740 </tr>
 741 <tr>
 742 <td align='center' colspan='3'>@BeforeMethod</td>
 743 </tr>
 744 <tr>
 745 <td>&nbsp;</td>
 746 <td>init</td>
 747 <td>cluster runner non_windows </td>
 748 </tr>
 749 <tr>
 750 <td align='center' colspan='3'>@AfterMethod</td>
 751 </tr>
 752 <tr>
 753 <td align='center' colspan='3'>@AfterClass</td>
 754 </tr>
 755 <tr>
 756 <td>compbio.data.sequence.ClustalAlignmentUtilTester</td>
 757 <td>&nbsp;</td><td>&nbsp;</td></tr>
 758 <tr>
 759 <td align='center' colspan='3'>@Test</td>
 760 </tr>
 761 <tr>
 762 <td>&nbsp;</td>
 763 <td>testReadClustalFile</td>
 764 <td>&nbsp;</td></tr>
 765 <tr>
 766 <td>&nbsp;</td>
 767 <td>testReadClustalFileLongNames</td>
 768 <td>&nbsp;</td></tr>
 769 <tr>
 770 <td>&nbsp;</td>
 771 <td>testReadClustalFileShortNames</td>
 772 <td>&nbsp;</td></tr>
 773 <tr>
 774 <td align='center' colspan='3'>@BeforeClass</td>
 775 </tr>
 776 <tr>
 777 <td align='center' colspan='3'>@BeforeMethod</td>
 778 </tr>
 779 <tr>
 780 <td align='center' colspan='3'>@AfterMethod</td>
 781 </tr>
 782 <tr>
 783 <td align='center' colspan='3'>@AfterClass</td>
 784 </tr>
 785 <tr>
 786 <td>compbio.runner.msa.MuscleParametersTester</td>
 787 <td>&nbsp;</td><td>&nbsp;</td></tr>
 788 <tr>
 789 <td align='center' colspan='3'>@Test</td>
 790 </tr>
 791 <tr>
 792 <td>&nbsp;</td>
 793 <td>testConstrainedParametersMaxValues</td>
 794 <td>runner </td>
 795 </tr>
 796 <tr>
 797 <td>&nbsp;</td>
 798 <td>testConstrainedParametersRandomValues</td>
 799 <td>runner </td>
 800 </tr>
 801 <tr>
 802 <td>&nbsp;</td>
 803 <td>testConstrainedParametersMinValues</td>
 804 <td>runner </td>
 805 </tr>
 806 <tr>
 807 <td>&nbsp;</td>
 808 <td>testArguments</td>
 809 <td>runner </td>
 810 </tr>
 811 <tr>
 812 <td>&nbsp;</td>
 813 <td>testOptions</td>
 814 <td>runner </td>
 815 </tr>
 816 <tr>
 817 <td>&nbsp;</td>
 818 <td>testDefaultParameters</td>
 819 <td>runner </td>
 820 </tr>
 821 <tr>
 822 <td>&nbsp;</td>
 823 <td>testParameters</td>
 824 <td>runner </td>
 825 </tr>
 826 <tr>
 827 <td>&nbsp;</td>
 828 <td>testPresets</td>
 829 <td>runner </td>
 830 </tr>
 831 <tr>
 832 <td>&nbsp;</td>
 833 <td>testConfiguration</td>
 834 <td>&nbsp;</td></tr>
 835 <tr>
 836 <td align='center' colspan='3'>@BeforeClass</td>
 837 </tr>
 838 <tr>
 839 <td align='center' colspan='3'>@BeforeMethod</td>
 840 </tr>
 841 <tr>
 842 <td>&nbsp;</td>
 843 <td>setup</td>
 844 <td>runner </td>
 845 </tr>
 846 <tr>
 847 <td align='center' colspan='3'>@AfterMethod</td>
 848 </tr>
 849 <tr>
 850 <td align='center' colspan='3'>@AfterClass</td>
 851 </tr>
 852 <tr>
 853 <td>compbio.data.sequence.FastaSequenceGeneratorTester</td>
 854 <td>&nbsp;</td><td>&nbsp;</td></tr>
 855 <tr>
 856 <td align='center' colspan='3'>@Test</td>
 857 </tr>
 858 <tr>
 859 <td>&nbsp;</td>
 860 <td>testProteinSequenceGeneration</td>
 861 <td>&nbsp;</td></tr>
 862 <tr>
 863 <td align='center' colspan='3'>@BeforeClass</td>
 864 </tr>
 865 <tr>
 866 <td align='center' colspan='3'>@BeforeMethod</td>
 867 </tr>
 868 <tr>
 869 <td align='center' colspan='3'>@AfterMethod</td>
 870 </tr>
 871 <tr>
 872 <td align='center' colspan='3'>@AfterClass</td>
 873 </tr>
 874 <tr>
 875 <td>compbio.engine.cluster.drmaa.ClusterSessionTester</td>
 876 <td>&nbsp;</td><td>&nbsp;</td></tr>
 877 <tr>
 878 <td align='center' colspan='3'>@Test</td>
 879 </tr>
 880 <tr>
 881 <td>&nbsp;</td>
 882 <td>testTaskList</td>
 883 <td>engine cluster </td>
 884 </tr>
 885 <tr>
 886 <td align='center' colspan='3'>@BeforeClass</td>
 887 </tr>
 888 <tr>
 889 <td align='center' colspan='3'>@BeforeMethod</td>
 890 </tr>
 891 <tr>
 892 <td align='center' colspan='3'>@AfterMethod</td>
 893 </tr>
 894 <tr>
 895 <td align='center' colspan='3'>@AfterClass</td>
 896 </tr>
 897 <tr>
 898 <td>compbio.data.sequence.FastaSequenceTester</td>
 899 <td>&nbsp;</td><td>&nbsp;</td></tr>
 900 <tr>
 901 <td align='center' colspan='3'>@Test</td>
 902 </tr>
 903 <tr>
 904 <td>&nbsp;</td>
 905 <td>testGetFormattedFasta</td>
 906 <td>&nbsp;</td></tr>
 907 <tr>
 908 <td align='center' colspan='3'>@BeforeClass</td>
 909 </tr>
 910 <tr>
 911 <td align='center' colspan='3'>@BeforeMethod</td>
 912 </tr>
 913 <tr>
 914 <td align='center' colspan='3'>@AfterMethod</td>
 915 </tr>
 916 <tr>
 917 <td align='center' colspan='3'>@AfterClass</td>
 918 </tr>
 919 <tr>
 920 <td>compbio.engine.client.PathValidatorTester</td>
 921 <td>&nbsp;</td><td>&nbsp;</td></tr>
 922 <tr>
 923 <td align='center' colspan='3'>@Test</td>
 924 </tr>
 925 <tr>
 926 <td>&nbsp;</td>
 927 <td>testIsAbsolutePath</td>
 928 <td>&nbsp;</td></tr>
 929 <tr>
 930 <td>&nbsp;</td>
 931 <td>testGetClassPath</td>
 932 <td>&nbsp;</td></tr>
 933 <tr>
 934 <td align='center' colspan='3'>@BeforeClass</td>
 935 </tr>
 936 <tr>
 937 <td align='center' colspan='3'>@BeforeMethod</td>
 938 </tr>
 939 <tr>
 940 <td align='center' colspan='3'>@AfterMethod</td>
 941 </tr>
 942 <tr>
 943 <td align='center' colspan='3'>@AfterClass</td>
 944 </tr>
 945 <tr>
 946 <td>compbio.data.sequence.SequenceUtilTester</td>
 947 <td>&nbsp;</td><td>&nbsp;</td></tr>
 948 <tr>
 949 <td align='center' colspan='3'>@Test</td>
 950 </tr>
 951 <tr>
 952 <td>&nbsp;</td>
 953 <td>testDeepCleanSequence</td>
 954 <td>&nbsp;</td></tr>
 955 <tr>
 956 <td>&nbsp;</td>
 957 <td>testReadWriteFasta</td>
 958 <td>&nbsp;</td></tr>
 959 <tr>
 960 <td>&nbsp;</td>
 961 <td>testisNonAmbNucleotideSequence</td>
 962 <td>&nbsp;</td></tr>
 963 <tr>
 964 <td>&nbsp;</td>
 965 <td>testisProteinSequence</td>
 966 <td>&nbsp;</td></tr>
 967 <tr>
 968 <td>&nbsp;</td>
 969 <td>testCleanSequence</td>
 970 <td>&nbsp;</td></tr>
 971 <tr>
 972 <td align='center' colspan='3'>@BeforeClass</td>
 973 </tr>
 974 <tr>
 975 <td align='center' colspan='3'>@BeforeMethod</td>
 976 </tr>
 977 <tr>
 978 <td align='center' colspan='3'>@AfterMethod</td>
 979 </tr>
 980 <tr>
 981 <td align='center' colspan='3'>@AfterClass</td>
 982 </tr>
 983 <tr>
 984 <td>compbio.runner.msa.TcoffeeParametersTester</td>
 985 <td>&nbsp;</td><td>&nbsp;</td></tr>
 986 <tr>
 987 <td align='center' colspan='3'>@Test</td>
 988 </tr>
 989 <tr>
 990 <td>&nbsp;</td>
 991 <td>testConstrainedParametersMaxValues</td>
 992 <td>runner non_windows </td>
 993 </tr>
 994 <tr>
 995 <td>&nbsp;</td>
 996 <td>testConstrainedParametersRandomValues</td>
 997 <td>runner non_windows </td>
 998 </tr>
 999 <tr>
1000 <td>&nbsp;</td>
1001 <td>testConstrainedParametersMinValues</td>
1002 <td>runner non_windows </td>
1003 </tr>
1004 <tr>
1005 <td>&nbsp;</td>
1006 <td>testArguments</td>
1007 <td>runner non_windows </td>
1008 </tr>
1009 <tr>
1010 <td>&nbsp;</td>
1011 <td>testOptions</td>
1012 <td>runner non_windows </td>
1013 </tr>
1014 <tr>
1015 <td>&nbsp;</td>
1016 <td>testDefaultParameters</td>
1017 <td>runner non_windows </td>
1018 </tr>
1019 <tr>
1020 <td>&nbsp;</td>
1021 <td>testParameters</td>
1022 <td>runner non_windows </td>
1023 </tr>
1024 <tr>
1025 <td>&nbsp;</td>
1026 <td>testPresets</td>
1027 <td>runner non_windows </td>
1028 </tr>
1029 <tr>
1030 <td>&nbsp;</td>
1031 <td>testConfiguration</td>
1032 <td>&nbsp;</td></tr>
1033 <tr>
1034 <td align='center' colspan='3'>@BeforeClass</td>
1035 </tr>
1036 <tr>
1037 <td align='center' colspan='3'>@BeforeMethod</td>
1038 </tr>
1039 <tr>
1040 <td>&nbsp;</td>
1041 <td>setup</td>
1042 <td>runner non_windows </td>
1043 </tr>
1044 <tr>
1045 <td align='center' colspan='3'>@AfterMethod</td>
1046 </tr>
1047 <tr>
1048 <td align='center' colspan='3'>@AfterClass</td>
1049 </tr>
1050 <tr>
1051 <td>compbio.runner.msa.ClustalWTester</td>
1052 <td>&nbsp;</td><td>&nbsp;</td></tr>
1053 <tr>
1054 <td align='center' colspan='3'>@Test</td>
1055 </tr>
1056 <tr>
1057 <td>&nbsp;</td>
1058 <td>testRunOnCluster</td>
1059 <td>cluster runner </td>
1060 </tr>
1061 <tr>
1062 <td>&nbsp;</td>
1063 <td>testPersistance</td>
1064 <td>runner </td>
1065 </tr>
1066 <tr>
1067 <td>&nbsp;</td>
1068 <td>testAddParameters</td>
1069 <td>&nbsp;</td></tr>
1070 <tr>
1071 <td>&nbsp;</td>
1072 <td>testOptionsLocally</td>
1073 <td>runner </td>
1074 </tr>
1075 <tr>
1076 <td>&nbsp;</td>
1077 <td>readStatisticsClusterExecution</td>
1078 <td>cluster runner </td>
1079 </tr>
1080 <tr>
1081 <td>&nbsp;</td>
1082 <td>testConfigurationLoading</td>
1083 <td>runner </td>
1084 </tr>
1085 <tr>
1086 <td>&nbsp;</td>
1087 <td>testRunWithMatrix</td>
1088 <td>runner </td>
1089 </tr>
1090 <tr>
1091 <td>&nbsp;</td>
1092 <td>readStatistics</td>
1093 <td>runner </td>
1094 </tr>
1095 <tr>
1096 <td>&nbsp;</td>
1097 <td>testRunLocally</td>
1098 <td>runner </td>
1099 </tr>
1100 <tr>
1101 <td align='center' colspan='3'>@BeforeClass</td>
1102 </tr>
1103 <tr>
1104 <td align='center' colspan='3'>@BeforeMethod</td>
1105 </tr>
1106 <tr>
1107 <td align='center' colspan='3'>@AfterMethod</td>
1108 </tr>
1109 <tr>
1110 <td align='center' colspan='3'>@AfterClass</td>
1111 </tr>
1112 <tr>
1113 <td>compbio.engine.cluster.drmaa.UtilTester</td>
1114 <td>&nbsp;</td><td>&nbsp;</td></tr>
1115 <tr>
1116 <td align='center' colspan='3'>@Test</td>
1117 </tr>
1118 <tr>
1119 <td>&nbsp;</td>
1120 <td>testParser</td>
1121 <td>&nbsp;</td></tr>
1122 <tr>
1123 <td align='center' colspan='3'>@BeforeClass</td>
1124 </tr>
1125 <tr>
1126 <td align='center' colspan='3'>@BeforeMethod</td>
1127 </tr>
1128 <tr>
1129 <td align='center' colspan='3'>@AfterMethod</td>
1130 </tr>
1131 <tr>
1132 <td align='center' colspan='3'>@AfterClass</td>
1133 </tr>
1134 <tr>
1135 <td>compbio.engine.conf.DirectoryManagerTester</td>
1136 <td>&nbsp;</td><td>&nbsp;</td></tr>
1137 <tr>
1138 <td align='center' colspan='3'>@Test</td>
1139 </tr>
1140 <tr>
1141 <td>&nbsp;</td>
1142 <td>testGetDirectory</td>
1143 <td>&nbsp;</td></tr>
1144 <tr>
1145 <td>&nbsp;</td>
1146 <td>testNanoTime</td>
1147 <td>&nbsp;</td></tr>
1148 <tr>
1149 <td align='center' colspan='3'>@BeforeClass</td>
1150 </tr>
1151 <tr>
1152 <td align='center' colspan='3'>@BeforeMethod</td>
1153 </tr>
1154 <tr>
1155 <td align='center' colspan='3'>@AfterMethod</td>
1156 </tr>
1157 <tr>
1158 <td align='center' colspan='3'>@AfterClass</td>
1159 </tr>
1160 <tr>
1161 <td>compbio.engine.cluster.drmaa.DrmaaClusterEngineTester</td>
1162 <td>&nbsp;</td><td>&nbsp;</td></tr>
1163 <tr>
1164 <td align='center' colspan='3'>@Test</td>
1165 </tr>
1166 <tr>
1167 <td>&nbsp;</td>
1168 <td>testSubmit</td>
1169 <td>engine cluster </td>
1170 </tr>
1171 <tr>
1172 <td>&nbsp;</td>
1173 <td>testCancel</td>
1174 <td>engine cluster </td>
1175 </tr>
1176 <tr>
1177 <td align='center' colspan='3'>@BeforeClass</td>
1178 </tr>
1179 <tr>
1180 <td align='center' colspan='3'>@BeforeMethod</td>
1181 </tr>
1182 <tr>
1183 <td align='center' colspan='3'>@AfterMethod</td>
1184 </tr>
1185 <tr>
1186 <td align='center' colspan='3'>@AfterClass</td>
1187 </tr>
1188 <tr>
1189 <td>compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester</td>
1190 <td>&nbsp;</td><td>&nbsp;</td></tr>
1191 <tr>
1192 <td align='center' colspan='3'>@Test</td>
1193 </tr>
1194 <tr>
1195 <td>&nbsp;</td>
1196 <td>testSubmit</td>
1197 <td>engine cluster </td>
1198 </tr>
1199 <tr>
1200 <td>&nbsp;</td>
1201 <td>testCancel</td>
1202 <td>engine cluster </td>
1203 </tr>
1204 <tr>
1205 <td>&nbsp;</td>
1206 <td>testGetJobStatus</td>
1207 <td>engine cluster </td>
1208 </tr>
1209 <tr>
1210 <td align='center' colspan='3'>@BeforeClass</td>
1211 </tr>
1212 <tr>
1213 <td align='center' colspan='3'>@BeforeMethod</td>
1214 </tr>
1215 <tr>
1216 <td align='center' colspan='3'>@AfterMethod</td>
1217 </tr>
1218 <tr>
1219 <td align='center' colspan='3'>@AfterClass</td>
1220 </tr>
1221 <tr>
1222 <td>compbio.metadata.PresetTester</td>
1223 <td>&nbsp;</td><td>&nbsp;</td></tr>
1224 <tr>
1225 <td align='center' colspan='3'>@Test</td>
1226 </tr>
1227 <tr>
1228 <td>&nbsp;</td>
1229 <td>marshallPreset</td>
1230 <td>&nbsp;</td></tr>
1231 <tr>
1232 <td>&nbsp;</td>
1233 <td>validatePresets</td>
1234 <td>&nbsp;</td></tr>
1235 <tr>
1236 <td align='center' colspan='3'>@BeforeClass</td>
1237 </tr>
1238 <tr>
1239 <td align='center' colspan='3'>@BeforeMethod</td>
1240 </tr>
1241 <tr>
1242 <td align='center' colspan='3'>@AfterMethod</td>
1243 </tr>
1244 <tr>
1245 <td align='center' colspan='3'>@AfterClass</td>
1246 </tr>
1247 <tr>
1248 <td>compbio.metadata.OptionMarshallerTester</td>
1249 <td>&nbsp;</td><td>&nbsp;</td></tr>
1250 <tr>
1251 <td align='center' colspan='3'>@Test</td>
1252 </tr>
1253 <tr>
1254 <td>&nbsp;</td>
1255 <td>testUnMarshalling</td>
1256 <td>&nbsp;</td></tr>
1257 <tr>
1258 <td>&nbsp;</td>
1259 <td>testMarshalling</td>
1260 <td>&nbsp;</td></tr>
1261 <tr>
1262 <td align='center' colspan='3'>@BeforeClass</td>
1263 </tr>
1264 <tr>
1265 <td align='center' colspan='3'>@BeforeMethod</td>
1266 </tr>
1267 <tr>
1268 <td>&nbsp;</td>
1269 <td>setup</td>
1270 <td>&nbsp;</td></tr>
1271 <tr>
1272 <td align='center' colspan='3'>@AfterMethod</td>
1273 </tr>
1274 <tr>
1275 <td align='center' colspan='3'>@AfterClass</td>
1276 </tr>
1277 <tr>
1278 <td>compbio.runner.msa.ClustalWParametersTester</td>
1279 <td>&nbsp;</td><td>&nbsp;</td></tr>
1280 <tr>
1281 <td align='center' colspan='3'>@Test</td>
1282 </tr>
1283 <tr>
1284 <td>&nbsp;</td>
1285 <td>testConstrainedParametersMaxValues</td>
1286 <td>runner </td>
1287 </tr>
1288 <tr>
1289 <td>&nbsp;</td>
1290 <td>testConstrainedParametersRandomValues</td>
1291 <td>runner </td>
1292 </tr>
1293 <tr>
1294 <td>&nbsp;</td>
1295 <td>testConstrainedParametersMinValues</td>
1296 <td>runner </td>
1297 </tr>
1298 <tr>
1299 <td>&nbsp;</td>
1300 <td>testArguments</td>
1301 <td>runner </td>
1302 </tr>
1303 <tr>
1304 <td>&nbsp;</td>
1305 <td>testOptions</td>
1306 <td>runner </td>
1307 </tr>
1308 <tr>
1309 <td>&nbsp;</td>
1310 <td>testDefaultParameters</td>
1311 <td>runner </td>
1312 </tr>
1313 <tr>
1314 <td>&nbsp;</td>
1315 <td>testParameters</td>
1316 <td>runner </td>
1317 </tr>
1318 <tr>
1319 <td>&nbsp;</td>
1320 <td>testPresets</td>
1321 <td>runner </td>
1322 </tr>
1323 <tr>
1324 <td>&nbsp;</td>
1325 <td>testConfiguration</td>
1326 <td>&nbsp;</td></tr>
1327 <tr>
1328 <td align='center' colspan='3'>@BeforeClass</td>
1329 </tr>
1330 <tr>
1331 <td align='center' colspan='3'>@BeforeMethod</td>
1332 </tr>
1333 <tr>
1334 <td>&nbsp;</td>
1335 <td>setup</td>
1336 <td>runner </td>
1337 </tr>
1338 <tr>
1339 <td align='center' colspan='3'>@AfterMethod</td>
1340 </tr>
1341 <tr>
1342 <td align='center' colspan='3'>@AfterClass</td>
1343 </tr>
1344 <tr>
1345 <td>compbio.runner._impl.RPSBlastTester</td>
1346 <td>&nbsp;</td><td>&nbsp;</td></tr>
1347 <tr>
1348 <td align='center' colspan='3'>@Test</td>
1349 </tr>
1350 <tr>
1351 <td>&nbsp;</td>
1352 <td>testGetTestCommand</td>
1353 <td>&nbsp;</td></tr>
1354 <tr>
1355 <td>&nbsp;</td>
1356 <td>testBuildCommand</td>
1357 <td>cluster runner </td>
1358 </tr>
1359 <tr>
1360 <td>&nbsp;</td>
1361 <td>testGetTestArgsCommand</td>
1362 <td>&nbsp;</td></tr>
1363 <tr>
1364 <td align='center' colspan='3'>@BeforeClass</td>
1365 </tr>
1366 <tr>
1367 <td align='center' colspan='3'>@BeforeMethod</td>
1368 </tr>
1369 <tr>
1370 <td align='center' colspan='3'>@AfterMethod</td>
1371 </tr>
1372 <tr>
1373 <td align='center' colspan='3'>@AfterClass</td>
1374 </tr>
1375 <tr>
1376 <td>compbio.engine.PulledFileCacheTester</td>
1377 <td>&nbsp;</td><td>&nbsp;</td></tr>
1378 <tr>
1379 <td align='center' colspan='3'>@Test</td>
1380 </tr>
1381 <tr>
1382 <td>&nbsp;</td>
1383 <td>test</td>
1384 <td>&nbsp;</td></tr>
1385 <tr>
1386 <td align='center' colspan='3'>@BeforeClass</td>
1387 </tr>
1388 <tr>
1389 <td align='center' colspan='3'>@BeforeMethod</td>
1390 </tr>
1391 <tr>
1392 <td align='center' colspan='3'>@AfterMethod</td>
1393 </tr>
1394 <tr>
1395 <td align='center' colspan='3'>@AfterClass</td>
1396 </tr>
1397 <tr>
1398 <td>compbio.runner._impl.MclTester</td>
1399 <td>&nbsp;</td><td>&nbsp;</td></tr>
1400 <tr>
1401 <td align='center' colspan='3'>@Test</td>
1402 </tr>
1403 <tr>
1404 <td>&nbsp;</td>
1405 <td>testGetTestCommand</td>
1406 <td>&nbsp;</td></tr>
1407 <tr>
1408 <td>&nbsp;</td>
1409 <td>testBuildCommand</td>
1410 <td>cluster runner </td>
1411 </tr>
1412 <tr>
1413 <td align='center' colspan='3'>@BeforeClass</td>
1414 </tr>
1415 <tr>
1416 <td align='center' colspan='3'>@BeforeMethod</td>
1417 </tr>
1418 <tr>
1419 <td align='center' colspan='3'>@AfterMethod</td>
1420 </tr>
1421 <tr>
1422 <td align='center' colspan='3'>@AfterClass</td>
1423 </tr>
1424 <tr>
1425 <td>compbio.engine.cluster.dundee._QueueTester</td>
1426 <td>&nbsp;</td><td>&nbsp;</td></tr>
1427 <tr>
1428 <td align='center' colspan='3'>@Test</td>
1429 </tr>
1430 <tr>
1431 <td>&nbsp;</td>
1432 <td>testQueue</td>
1433 <td>&nbsp;</td></tr>
1434 <tr>
1435 <td align='center' colspan='3'>@BeforeClass</td>
1436 </tr>
1437 <tr>
1438 <td align='center' colspan='3'>@BeforeMethod</td>
1439 </tr>
1440 <tr>
1441 <td align='center' colspan='3'>@AfterMethod</td>
1442 </tr>
1443 <tr>
1444 <td align='center' colspan='3'>@AfterClass</td>
1445 </tr>
1446 <tr>
1447 <td>compbio.runner.msa.ProbconsParametersTester</td>
1448 <td>&nbsp;</td><td>&nbsp;</td></tr>
1449 <tr>
1450 <td align='center' colspan='3'>@Test</td>
1451 </tr>
1452 <tr>
1453 <td>&nbsp;</td>
1454 <td>testConstrainedParametersMaxValues</td>
1455 <td>runner non_windows </td>
1456 </tr>
1457 <tr>
1458 <td>&nbsp;</td>
1459 <td>testConstrainedParametersRandomValues</td>
1460 <td>runner non_windows </td>
1461 </tr>
1462 <tr>
1463 <td>&nbsp;</td>
1464 <td>testConstrainedParametersMinValues</td>
1465 <td>runner non_windows </td>
1466 </tr>
1467 <tr>
1468 <td>&nbsp;</td>
1469 <td>testArguments</td>
1470 <td>runner non_windows </td>
1471 </tr>
1472 <tr>
1473 <td>&nbsp;</td>
1474 <td>testOptions</td>
1475 <td>runner non_windows </td>
1476 </tr>
1477 <tr>
1478 <td>&nbsp;</td>
1479 <td>testDefaultParameters</td>
1480 <td>runner non_windows </td>
1481 </tr>
1482 <tr>
1483 <td>&nbsp;</td>
1484 <td>testParameters</td>
1485 <td>runner non_windows </td>
1486 </tr>
1487 <tr>
1488 <td>&nbsp;</td>
1489 <td>testConfiguration</td>
1490 <td>&nbsp;</td></tr>
1491 <tr>
1492 <td align='center' colspan='3'>@BeforeClass</td>
1493 </tr>
1494 <tr>
1495 <td align='center' colspan='3'>@BeforeMethod</td>
1496 </tr>
1497 <tr>
1498 <td>&nbsp;</td>
1499 <td>setup</td>
1500 <td>runner non_windows </td>
1501 </tr>
1502 <tr>
1503 <td align='center' colspan='3'>@AfterMethod</td>
1504 </tr>
1505 <tr>
1506 <td align='center' colspan='3'>@AfterClass</td>
1507 </tr>
1508 <tr>
1509 <td>compbio.engine.conf.RunnerConfigMarshallerTester</td>
1510 <td>&nbsp;</td><td>&nbsp;</td></tr>
1511 <tr>
1512 <td align='center' colspan='3'>@Test</td>
1513 </tr>
1514 <tr>
1515 <td>&nbsp;</td>
1516 <td>testValidationOnMarshalling</td>
1517 <td>&nbsp;</td></tr>
1518 <tr>
1519 <td>&nbsp;</td>
1520 <td>testUnMarshalling</td>
1521 <td>&nbsp;</td></tr>
1522 <tr>
1523 <td>&nbsp;</td>
1524 <td>testValidation</td>
1525 <td>&nbsp;</td></tr>
1526 <tr>
1527 <td>&nbsp;</td>
1528 <td>testSchemaFromCodeGeneration</td>
1529 <td>&nbsp;</td></tr>
1530 <tr>
1531 <td>&nbsp;</td>
1532 <td>testMarshalling</td>
1533 <td>&nbsp;</td></tr>
1534 <tr>
1535 <td align='center' colspan='3'>@BeforeClass</td>
1536 </tr>
1537 <tr>
1538 <td align='center' colspan='3'>@BeforeMethod</td>
1539 </tr>
1540 <tr>
1541 <td>&nbsp;</td>
1542 <td>setup</td>
1543 <td>&nbsp;</td></tr>
1544 <tr>
1545 <td align='center' colspan='3'>@AfterMethod</td>
1546 </tr>
1547 <tr>
1548 <td align='center' colspan='3'>@AfterClass</td>
1549 </tr>
1550 </table>