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+<!-- ======== START OF CLASS DATA ======== -->\r
+<H2>\r
+<FONT SIZE="-1">\r
+compbio.metadata</FONT>\r
+<BR>\r
+Class LimitsManager<T></H2>\r
+<PRE>\r
+java.lang.Object\r
+ <IMG SRC="../../resources/inherit.gif" ALT="extended by "><B>compbio.metadata.LimitsManager<T></B>\r
+</PRE>\r
+<DL>\r
+<DT><DT><B>Type Parameters:</B><DD><CODE>T</CODE> - executable type</DL>\r
+<HR>\r
+<DL>\r
+<DT><PRE>public class <B>LimitsManager<T></B><DT>extends java.lang.Object</DL>\r
+</PRE>\r
+\r
+<P>\r
+A collection of Limits\r
+<P>\r
+\r
+<P>\r
+<DL>\r
+<DT><B>Version:</B></DT>\r
+ <DD>1.0 January 2010</DD>\r
+<DT><B>Author:</B></DT>\r
+ <DD>pvtroshin</DD>\r
+<DT><B>See Also:</B><DD><A HREF="../../compbio/metadata/Limit.html" title="class in compbio.metadata"><CODE>Limit</CODE></A></DL>\r
+<HR>\r
+\r
+<P>\r
+\r
+<!-- ======== CONSTRUCTOR SUMMARY ======== -->\r
+\r
+<A NAME="constructor_summary"><!-- --></A>\r
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
+<TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
+<B>Constructor Summary</B></FONT></TH>\r
+</TR>\r
+<TR BGCOLOR="white" CLASS="TableRowColor">\r
+<TD><CODE><B><A HREF="../../compbio/metadata/LimitsManager.html#LimitsManager()">LimitsManager</A></B>()</CODE>\r
+\r
+<BR>\r
+ </TD>\r
+</TR>\r
+</TABLE>\r
+ \r
+<!-- ========== METHOD SUMMARY =========== -->\r
+\r
+<A NAME="method_summary"><!-- --></A>\r
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
+<TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">\r
+<B>Method Summary</B></FONT></TH>\r
+</TR>\r
+<TR BGCOLOR="white" CLASS="TableRowColor">\r
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
+<CODE> <A HREF="../../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</A><<A HREF="../../compbio/metadata/LimitsManager.html" title="type parameter in LimitsManager">T</A>></CODE></FONT></TD>\r
+<TD><CODE><B><A HREF="../../compbio/metadata/LimitsManager.html#getDefaultLimit()">getDefaultLimit</A></B>()</CODE>\r
+\r
+<BR>\r
+ </TD>\r
+</TR>\r
+<TR BGCOLOR="white" CLASS="TableRowColor">\r
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
+<CODE> <A HREF="../../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</A><<A HREF="../../compbio/metadata/LimitsManager.html" title="type parameter in LimitsManager">T</A>></CODE></FONT></TD>\r
+<TD><CODE><B><A HREF="../../compbio/metadata/LimitsManager.html#getLimitByName(java.lang.String)">getLimitByName</A></B>(java.lang.String presetName)</CODE>\r
+\r
+<BR>\r
+ </TD>\r
+</TR>\r
+<TR BGCOLOR="white" CLASS="TableRowColor">\r
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
+<CODE> java.util.List<<A HREF="../../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</A><<A HREF="../../compbio/metadata/LimitsManager.html" title="type parameter in LimitsManager">T</A>>></CODE></FONT></TD>\r
+<TD><CODE><B><A HREF="../../compbio/metadata/LimitsManager.html#getLimits()">getLimits</A></B>()</CODE>\r
+\r
+<BR>\r
+ </TD>\r
+</TR>\r
+<TR BGCOLOR="white" CLASS="TableRowColor">\r
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
+<CODE> java.lang.String</CODE></FONT></TD>\r
+<TD><CODE><B><A HREF="../../compbio/metadata/LimitsManager.html#toString()">toString</A></B>()</CODE>\r
+\r
+<BR>\r
+ </TD>\r
+</TR>\r
+<TR BGCOLOR="white" CLASS="TableRowColor">\r
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">\r
+<CODE> void</CODE></FONT></TD>\r
+<TD><CODE><B><A HREF="../../compbio/metadata/LimitsManager.html#validate(compbio.metadata.PresetManager)">validate</A></B>(<A HREF="../../compbio/metadata/PresetManager.html" title="class in compbio.metadata">PresetManager</A><<A HREF="../../compbio/metadata/LimitsManager.html" title="type parameter in LimitsManager">T</A>> presets)</CODE>\r
+\r
+<BR>\r
+ Validate Limits</TD>\r
+</TR>\r
+</TABLE>\r
+ <A NAME="methods_inherited_from_class_java.lang.Object"><!-- --></A>\r
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
+<TR BGCOLOR="#EEEEFF" CLASS="TableSubHeadingColor">\r
+<TH ALIGN="left"><B>Methods inherited from class java.lang.Object</B></TH>\r
+</TR>\r
+<TR BGCOLOR="white" CLASS="TableRowColor">\r
+<TD><CODE>equals, getClass, hashCode, notify, notifyAll, wait, wait, wait</CODE></TD>\r
+</TR>\r
+</TABLE>\r
+ \r
+<P>\r
+\r
+<!-- ========= CONSTRUCTOR DETAIL ======== -->\r
+\r
+<A NAME="constructor_detail"><!-- --></A>\r
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
+<TH ALIGN="left" COLSPAN="1"><FONT SIZE="+2">\r
+<B>Constructor Detail</B></FONT></TH>\r
+</TR>\r
+</TABLE>\r
+\r
+<A NAME="LimitsManager()"><!-- --></A><H3>\r
+LimitsManager</H3>\r
+<PRE>\r
+public <B>LimitsManager</B>()</PRE>\r
+<DL>\r
+</DL>\r
+\r
+<!-- ============ METHOD DETAIL ========== -->\r
+\r
+<A NAME="method_detail"><!-- --></A>\r
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">\r
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">\r
+<TH ALIGN="left" COLSPAN="1"><FONT SIZE="+2">\r
+<B>Method Detail</B></FONT></TH>\r
+</TR>\r
+</TABLE>\r
+\r
+<A NAME="getLimits()"><!-- --></A><H3>\r
+getLimits</H3>\r
+<PRE>\r
+public java.util.List<<A HREF="../../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</A><<A HREF="../../compbio/metadata/LimitsManager.html" title="type parameter in LimitsManager">T</A>>> <B>getLimits</B>()</PRE>\r
+<DL>\r
+<DD><DL>\r
+\r
+<DT><B>Returns:</B><DD>all limits defined for an executable T</DL>\r
+</DD>\r
+</DL>\r
+<HR>\r
+\r
+<A NAME="toString()"><!-- --></A><H3>\r
+toString</H3>\r
+<PRE>\r
+public java.lang.String <B>toString</B>()</PRE>\r
+<DL>\r
+<DD><DL>\r
+<DT><B>Overrides:</B><DD><CODE>toString</CODE> in class <CODE>java.lang.Object</CODE></DL>\r
+</DD>\r
+<DD><DL>\r
+</DL>\r
+</DD>\r
+</DL>\r
+<HR>\r
+\r
+<A NAME="getLimitByName(java.lang.String)"><!-- --></A><H3>\r
+getLimitByName</H3>\r
+<PRE>\r
+public <A HREF="../../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</A><<A HREF="../../compbio/metadata/LimitsManager.html" title="type parameter in LimitsManager">T</A>> <B>getLimitByName</B>(java.lang.String presetName)</PRE>\r
+<DL>\r
+<DD><DL>\r
+<DT><B>Parameters:</B><DD><CODE>presetName</CODE> - \r
+<DT><B>Returns:</B><DD>Limit defined for the executable T and presetName. If no limit is
+ defined for the presetName then default Limit is returned. If
+ presetName is empty or null than the default Limit will be
+ returned. If not limit defined for the type T than NULL will be
+ returned</DL>\r
+</DD>\r
+</DL>\r
+<HR>\r
+\r
+<A NAME="getDefaultLimit()"><!-- --></A><H3>\r
+getDefaultLimit</H3>\r
+<PRE>\r
+public <A HREF="../../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</A><<A HREF="../../compbio/metadata/LimitsManager.html" title="type parameter in LimitsManager">T</A>> <B>getDefaultLimit</B>()</PRE>\r
+<DL>\r
+<DD><DL>\r
+\r
+<DT><B>Returns:</B><DD>the default Limit for an executable type T</DL>\r
+</DD>\r
+</DL>\r
+<HR>\r
+\r
+<A NAME="validate(compbio.metadata.PresetManager)"><!-- --></A><H3>\r
+validate</H3>\r
+<PRE>\r
+public void <B>validate</B>(<A HREF="../../compbio/metadata/PresetManager.html" title="class in compbio.metadata">PresetManager</A><<A HREF="../../compbio/metadata/LimitsManager.html" title="type parameter in LimitsManager">T</A>> presets)\r
+ throws javax.xml.bind.ValidationException</PRE>\r
+<DL>\r
+<DD>Validate Limits\r
+<P>\r
+<DD><DL>\r
+<DT><B>Parameters:</B><DD><CODE>presets</CODE> - \r
+<DT><B>Throws:</B>\r
+<DD><CODE>javax.xml.bind.ValidationException</CODE> - if any of the Limit defined is found to be invalid. That is
+ when
+
+ 1) No default limit is defined
+
+ 2) More than 1 default limit is defined
+
+ 3) Limit's preset name does not match any presets for type T<DT><B>See Also:</B><DD><A HREF="../../compbio/metadata/Limit.html" title="class in compbio.metadata"><CODE>Limit</CODE></A>, \r
+<A HREF="../../compbio/metadata/Preset.html" title="class in compbio.metadata"><CODE>Preset</CODE></A></DL>\r
+</DD>\r
+</DL>\r
+<!-- ========= END OF CLASS DATA ========= -->\r
+<HR>\r
+\r
+\r
+<!-- ======= START OF BOTTOM NAVBAR ====== -->\r
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+ <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A> </TD>\r
+ <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> <FONT CLASS="NavBarFont1Rev"><B>Class</B></FONT> </TD>\r
+ <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="class-use/LimitsManager.html"><FONT CLASS="NavBarFont1"><B>Use</B></FONT></A> </TD>\r
+ <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="package-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A> </TD>\r
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+</EM>\r
+</TD>\r
+</TR>\r
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+<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">\r
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+</HTML>\r