adding clustalO documentation

[jabaws.git] / WEB-INF / web.xml

diff --git a/WEB-INF/web.xml b/WEB-INF/web.xml
index b03b1fe..794c4cb 100644 (file)
--- a/WEB-INF/web.xml
+++ b/WEB-INF/web.xml
@@ -21,6 +21,25 @@
                <session-timeout>20</session-timeout>\r
     </session-config>\r
  \r
+     <servlet>\r
+        <display-name>This is a standard tomcat 'default' servlet for making listings</display-name>\r
+        <servlet-name>listings</servlet-name>\r
+        <servlet-class>org.apache.catalina.servlets.DefaultServlet</servlet-class>\r
+        <init-param>\r
+            <param-name>debug</param-name>\r
+            <param-value>0</param-value>\r
+        </init-param>\r
+        <init-param>\r
+            <param-name>readonly</param-name>\r
+            <param-value>true</param-value>\r
+        </init-param>\r
+        <init-param>\r
+            <param-name>listings</param-name>\r
+            <param-value>true</param-value>\r
+        </init-param>\r
+        <load-on-startup>1</load-on-startup>\r
+    </servlet>\r
+\r
     <servlet>\r
        <description>Display pre-calculated accounting info</description>\r
        <servlet-name>DisplayStat</servlet-name>\r
@@ -39,6 +58,18 @@
        <servlet-class>compbio.stat.servlet.AnnualStat</servlet-class>\r
     </servlet>\r
     \r
+     <servlet>\r
+       <description>Display monthly summary statistics with no links to details</description>\r
+       <servlet-name>PublicAnnualStat</servlet-name>\r
+       <servlet-class>compbio.stat.servlet.AnnualStat</servlet-class>\r
+    </servlet>\r
+    \r
+    <servlet>\r
+        <servlet-name>RegistryWS</servlet-name>\r
+        <servlet-class>com.sun.xml.ws.transport.http.servlet.WSServlet</servlet-class>\r
+        <load-on-startup>1</load-on-startup>\r
+    </servlet>\r
+    \r
     <servlet>\r
         <servlet-name>ClustalWS</servlet-name>\r
         <servlet-class>com.sun.xml.ws.transport.http.servlet.WSServlet</servlet-class>\r
@@ -46,6 +77,12 @@
     </servlet>\r
     \r
     <servlet>\r
+        <servlet-name>ClustalOWS</servlet-name>\r
+        <servlet-class>com.sun.xml.ws.transport.http.servlet.WSServlet</servlet-class>\r
+        <load-on-startup>1</load-on-startup>\r
+    </servlet>\r
+    \r
+    <servlet>\r
         <servlet-name>MuscleWS</servlet-name>\r
         <servlet-class>com.sun.xml.ws.transport.http.servlet.WSServlet</servlet-class>\r
         <load-on-startup>1</load-on-startup>\r
@@ -92,7 +129,18 @@
         <servlet-class>com.sun.xml.ws.transport.http.servlet.WSServlet</servlet-class>\r
         <load-on-startup>1</load-on-startup>\r
     </servlet>\r
-        \r
+    \r
+     <servlet>\r
+        <servlet-name>IUPredWS</servlet-name>\r
+        <servlet-class>com.sun.xml.ws.transport.http.servlet.WSServlet</servlet-class>\r
+        <load-on-startup>1</load-on-startup>\r
+    </servlet>\r
+   \r
+    <servlet-mapping>\r
+       <servlet-name>listings</servlet-name>\r
+       <url-pattern>/</url-pattern>\r
+       </servlet-mapping>\r
+            \r
     <servlet-mapping>\r
        <servlet-name>DisplayStat</servlet-name>\r
        <url-pattern>/DisplayStat</url-pattern>\r
@@ -103,16 +151,32 @@
        <url-pattern>/AnnualStat</url-pattern>\r
        </servlet-mapping>  \r
     \r
+     <servlet-mapping>\r
+       <servlet-name>PublicAnnualStat</servlet-name>\r
+       <url-pattern>/PublicAnnualStat</url-pattern>\r
+       </servlet-mapping>  \r
+    \r
+    \r
     <servlet-mapping>\r
        <servlet-name>Joblist</servlet-name>\r
        <url-pattern>/Joblist</url-pattern>\r
        </servlet-mapping> \r
        \r
     <servlet-mapping>\r
+       <servlet-name>RegistryWS</servlet-name>\r
+       <url-pattern>/RegistryWS</url-pattern>\r
+    </servlet-mapping>\r
+    \r
+    <servlet-mapping>\r
        <servlet-name>ClustalWS</servlet-name>\r
        <url-pattern>/ClustalWS</url-pattern>\r
     </servlet-mapping>\r
     \r
+     <servlet-mapping>\r
+       <servlet-name>ClustalOWS</servlet-name>\r
+       <url-pattern>/ClustalOWS</url-pattern>\r
+    </servlet-mapping>\r
+    \r
     <servlet-mapping>\r
        <servlet-name>MuscleWS</servlet-name>\r
        <url-pattern>/MuscleWS</url-pattern>\r
@@ -153,10 +217,16 @@
        <url-pattern>/GlobPlotWS</url-pattern>\r
    </servlet-mapping>\r
    \r
+    <servlet-mapping>\r
+       <servlet-name>IUPredWS</servlet-name>\r
+       <url-pattern>/IUPredWS</url-pattern>\r
+   </servlet-mapping>\r
+   \r
    <security-constraint>\r
     <web-resource-collection>\r
        <web-resource-name>Administrator pages</web-resource-name>\r
                <!-- Prohibit access to any resources -->\r
+       <url-pattern>/</url-pattern>\r
        <url-pattern>/DisplayStat</url-pattern>\r
        <url-pattern>/Joblist</url-pattern>\r
        <url-pattern>/AnnualStat</url-pattern>\r