<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
-<meta http-equiv="X-UA-Compatible" content="IE=9"/>
-<title>RNAlib-2.1.2: /home/mescalin/ronny/public_html/programs/ViennaRNA/H/MEA.h File Reference</title>
+<title>RNAlib-2.1.2: /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/MEA.h File Reference</title>
<link href="tabs.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="jquery.js"></script>
-<script type="text/javascript" src="dynsections.js"></script>
-<link href="navtree.css" rel="stylesheet" type="text/css"/>
-<script type="text/javascript" src="resize.js"></script>
-<script type="text/javascript" src="navtree.js"></script>
-<script type="text/javascript">
- $(document).ready(initResizable);
-</script>
-<link href="doxygen.css" rel="stylesheet" type="text/css" />
+<link href="doxygen.css" rel="stylesheet" type="text/css"/>
</head>
<body>
-<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
-<div id="titlearea">
-<table cellspacing="0" cellpadding="0">
- <tbody>
- <tr style="height: 56px;">
- <td style="padding-left: 0.5em;">
- <div id="projectname">RNAlib-2.1.2
- </div>
- </td>
- </tr>
- </tbody>
-</table>
-</div>
-<!-- end header part -->
-<!-- Generated by Doxygen 1.8.1.1 -->
- <div id="navrow1" class="tabs">
- <ul class="tablist">
- <li><a href="index.html"><span>Main Page</span></a></li>
- <li><a href="pages.html"><span>Related Pages</span></a></li>
+<!-- Generated by Doxygen 1.6.1 -->
+<script type="text/javascript">
+<!--
+function changeDisplayState (e){
+ var num=this.id.replace(/[^[0-9]/g,'');
+ var button=this.firstChild;
+ var sectionDiv=document.getElementById('dynsection'+num);
+ if (sectionDiv.style.display=='none'||sectionDiv.style.display==''){
+ sectionDiv.style.display='block';
+ button.src='open.gif';
+ }else{
+ sectionDiv.style.display='none';
+ button.src='closed.gif';
+ }
+}
+function initDynSections(){
+ var divs=document.getElementsByTagName('div');
+ var sectionCounter=1;
+ for(var i=0;i<divs.length-1;i++){
+ if(divs[i].className=='dynheader'&&divs[i+1].className=='dynsection'){
+ var header=divs[i];
+ var section=divs[i+1];
+ var button=header.firstChild;
+ if (button!='IMG'){
+ divs[i].insertBefore(document.createTextNode(' '),divs[i].firstChild);
+ button=document.createElement('img');
+ divs[i].insertBefore(button,divs[i].firstChild);
+ }
+ header.style.cursor='pointer';
+ header.onclick=changeDisplayState;
+ header.id='dynheader'+sectionCounter;
+ button.src='closed.gif';
+ section.id='dynsection'+sectionCounter;
+ section.style.display='none';
+ section.style.marginLeft='14px';
+ sectionCounter++;
+ }
+ }
+}
+window.onload = initDynSections;
+-->
+</script>
+<div class="navigation" id="top">
+ <div class="tabs">
+ <ul>
+ <li><a href="main.html"><span>Main Page</span></a></li>
+ <li><a href="pages.html"><span>Related Pages</span></a></li>
<li><a href="modules.html"><span>Modules</span></a></li>
- <li><a href="annotated.html"><span>Data Structures</span></a></li>
+ <li><a href="annotated.html"><span>Data Structures</span></a></li>
<li class="current"><a href="files.html"><span>Files</span></a></li>
</ul>
</div>
- <div id="navrow2" class="tabs2">
- <ul class="tablist">
- <li><a href="files.html"><span>File List</span></a></li>
+ <div class="tabs">
+ <ul>
+ <li><a href="files.html"><span>File List</span></a></li>
<li><a href="globals.html"><span>Globals</span></a></li>
</ul>
</div>
-</div><!-- top -->
-<div id="side-nav" class="ui-resizable side-nav-resizable">
- <div id="nav-tree">
- <div id="nav-tree-contents">
- </div>
- </div>
- <div id="splitbar" style="-moz-user-select:none;"
- class="ui-resizable-handle">
- </div>
</div>
-<script type="text/javascript">
-$(document).ready(function(){initNavTree('MEA_8h.html','');});
-</script>
-<div id="doc-content">
-<div class="header">
- <div class="summary">
-<a href="#func-members">Functions</a> </div>
- <div class="headertitle">
-<div class="title">MEA.h File Reference</div> </div>
-</div><!--header-->
<div class="contents">
-
+<h1>/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/MEA.h File Reference</h1>
<p>Computes a MEA (maximum expected accuracy) structure.
-<a href="#details">More...</a></p>
-<div class="textblock"><div id="dynsection-0" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
- <img id="dynsection-0-trigger" src="closed.png" alt="+"/> Include dependency graph for MEA.h:</div>
-<div id="dynsection-0-summary" class="dynsummary" style="display:block;">
-</div>
-<div id="dynsection-0-content" class="dyncontent" style="display:none;">
-<div class="center"><img src="MEA_8h__incl.png" border="0" usemap="#_2home_2mescalin_2ronny_2public__html_2programs_2ViennaRNA_2H_2MEA_8h" alt=""/></div>
-<map name="_2home_2mescalin_2ronny_2public__html_2programs_2ViennaRNA_2H_2MEA_8h" id="_2home_2mescalin_2ronny_2public__html_2programs_2ViennaRNA_2H_2MEA_8h">
-<area shape="rect" id="node3" href="data__structures_8h.html" title="All datastructures and typedefs shared among the Vienna RNA Package can be found here." alt="" coords="19,109,153,136"/><area shape="rect" id="node5" href="energy__const_8h.html" title="energy_const.h" alt="" coords="27,184,147,211"/></map>
-</div>
+<a href="#_details">More...</a></p>
+<div class="dynheader">
+Include dependency graph for MEA.h:</div>
+<div class="dynsection">
+<div class="center"><img src="MEA_8h__incl.png" border="0" usemap="#_2homes_2fmmarquesmadeira_2Projects_2jabaws_2binaries_2src_2ViennaRNA_2H_2MEA_8h_map" alt=""/></div>
+<map name="_2homes_2fmmarquesmadeira_2Projects_2jabaws_2binaries_2src_2ViennaRNA_2H_2MEA_8h_map" id="_2homes_2fmmarquesmadeira_2Projects_2jabaws_2binaries_2src_2ViennaRNA_2H_2MEA_8h">
+<area shape="rect" id="node3" href="data__structures_8h.html" title="All datastructures and typedefs shared among the Vienna RNA Package can be found..." alt="" coords="188,86,311,117"/><area shape="rect" id="node5" href="energy__const_8h.html" title="energy_const.h" alt="" coords="193,166,305,197"/></map>
</div>
+
<p><a href="MEA_8h_source.html">Go to the source code of this file.</a></p>
-<table class="memberdecls">
-<tr class="heading"><td colspan="2"><h2><a name="func-members"></a>
-Functions</h2></td></tr>
-<tr class="memitem:a396ec6144c6a74fcbab4cea6b42d76c3"><td class="memItemLeft" align="right" valign="top">float </td><td class="memItemRight" valign="bottom"><a class="el" href="MEA_8h.html#a396ec6144c6a74fcbab4cea6b42d76c3">MEA</a> (<a class="el" href="structplist.html">plist</a> *p, char *structure, double gamma)</td></tr>
-<tr class="memdesc:a396ec6144c6a74fcbab4cea6b42d76c3"><td class="mdescLeft"> </td><td class="mdescRight">Computes a MEA (maximum expected accuracy) structure. <a href="#a396ec6144c6a74fcbab4cea6b42d76c3"></a><br/></td></tr>
+<table border="0" cellpadding="0" cellspacing="0">
+<tr><td colspan="2"><h2>Functions</h2></td></tr>
+<tr><td class="memItemLeft" align="right" valign="top">float </td><td class="memItemRight" valign="bottom"><a class="el" href="MEA_8h.html#a396ec6144c6a74fcbab4cea6b42d76c3">MEA</a> (<a class="el" href="structplist.html">plist</a> *p, char *structure, double gamma)</td></tr>
+<tr><td class="mdescLeft"> </td><td class="mdescRight">Computes a MEA (maximum expected accuracy) structure. <a href="#a396ec6144c6a74fcbab4cea6b42d76c3"></a><br/></td></tr>
</table>
-<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
-<div class="textblock"><p>Computes a MEA (maximum expected accuracy) structure. </p>
-</div><hr/><h2>Function Documentation</h2>
-<a class="anchor" id="a396ec6144c6a74fcbab4cea6b42d76c3"></a>
+<hr/><a name="_details"></a><h2>Detailed Description</h2>
+<p>Computes a MEA (maximum expected accuracy) structure. </p>
+<hr/><h2>Function Documentation</h2>
+<a class="anchor" id="a396ec6144c6a74fcbab4cea6b42d76c3"></a><!-- doxytag: member="MEA.h::MEA" ref="a396ec6144c6a74fcbab4cea6b42d76c3" args="(plist *p, char *structure, double gamma)" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">float MEA </td>
<td>(</td>
- <td class="paramtype"><a class="el" href="structplist.html">plist</a> * </td>
- <td class="paramname"><em>p</em>, </td>
+ <td class="paramtype"><a class="el" href="structplist.html">plist</a> * </td>
+ <td class="paramname"> <em>p</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
- <td class="paramtype">char * </td>
- <td class="paramname"><em>structure</em>, </td>
+ <td class="paramtype">char * </td>
+ <td class="paramname"> <em>structure</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
- <td class="paramtype">double </td>
- <td class="paramname"><em>gamma</em> </td>
+ <td class="paramtype">double </td>
+ <td class="paramname"> <em>gamma</em></td><td> </td>
</tr>
<tr>
<td></td>
<td>)</td>
- <td></td><td></td>
+ <td></td><td></td><td></td>
</tr>
</table>
-</div><div class="memdoc">
+</div>
+<div class="memdoc">
<p>Computes a MEA (maximum expected accuracy) structure. </p>
<p>The algorithm maximizes the expected accuracy </p>
</div>
</div>
-</div><!-- contents -->
-</div><!-- doc-content -->
-<!-- start footer part -->
-<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
- <ul>
- <li class="navelem"><a class="el" href="dir_d72344b28b4f2089ce25682c4e6eba22.html">H</a></li><li class="navelem"><a class="el" href="MEA_8h.html">MEA.h</a></li>
- <li class="footer">Generated on Wed Jul 24 2013 13:38:58 for RNAlib-2.1.2 by
- <a href="http://www.doxygen.org/index.html">
- <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.1.1 </li>
- </ul>
</div>
+<hr size="1"/><address style="text-align: right;"><small>Generated on 11 Apr 2017 for RNAlib-2.1.2 by
+<a href="http://www.doxygen.org/index.html">
+<img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.6.1 </small></address>
</body>
</html>
git://source.jalview.org / jabaws.git / blobdiff