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+<h1>/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/treedist.h File Reference</h1>
<p>Functions for <a class="el" href="structTree.html">Tree</a> Edit Distances.
-<a href="#details">More...</a></p>
-<div class="textblock"><div id="dynsection-0" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
- <img id="dynsection-0-trigger" src="closed.png" alt="+"/> Include dependency graph for treedist.h:</div>
-<div id="dynsection-0-summary" class="dynsummary" style="display:block;">
-</div>
-<div id="dynsection-0-content" class="dyncontent" style="display:none;">
-<div class="center"><img src="treedist_8h__incl.png" border="0" usemap="#_2home_2mescalin_2ronny_2public__html_2programs_2ViennaRNA_2H_2treedist_8h" alt=""/></div>
-<map name="_2home_2mescalin_2ronny_2public__html_2programs_2ViennaRNA_2H_2treedist_8h" id="_2home_2mescalin_2ronny_2public__html_2programs_2ViennaRNA_2H_2treedist_8h">
-<area shape="rect" id="node3" href="dist__vars_8h.html" title="Global variables for Distance-Package." alt="" coords="48,109,139,136"/></map>
-</div>
+<a href="#_details">More...</a></p>
+<div class="dynheader">
+Include dependency graph for treedist.h:</div>
+<div class="dynsection">
+<div class="center"><img src="treedist_8h__incl.png" border="0" usemap="#_2homes_2fmmarquesmadeira_2Projects_2jabaws_2binaries_2src_2ViennaRNA_2H_2treedist_8h_map" alt=""/></div>
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</div>
+
<p><a href="treedist_8h_source.html">Go to the source code of this file.</a></p>
-<table class="memberdecls">
-<tr class="heading"><td colspan="2"><h2><a name="func-members"></a>
-Functions</h2></td></tr>
-<tr class="memitem:a08fe4d5afd385dce593b86eaf010c6e3"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structTree.html">Tree</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="treedist_8h.html#a08fe4d5afd385dce593b86eaf010c6e3">make_tree</a> (char *struc)</td></tr>
-<tr class="memdesc:a08fe4d5afd385dce593b86eaf010c6e3"><td class="mdescLeft"> </td><td class="mdescRight">Constructs a <a class="el" href="structTree.html">Tree</a> ( essentially the postorder list ) of the structure 'struc', for use in <a class="el" href="treedist_8h.html#a3b21f1925f7071f46d93431a835217bb" title="Calculates the edit distance of the two trees.">tree_edit_distance()</a>. <a href="#a08fe4d5afd385dce593b86eaf010c6e3"></a><br/></td></tr>
-<tr class="memitem:a3b21f1925f7071f46d93431a835217bb"><td class="memItemLeft" align="right" valign="top">float </td><td class="memItemRight" valign="bottom"><a class="el" href="treedist_8h.html#a3b21f1925f7071f46d93431a835217bb">tree_edit_distance</a> (<a class="el" href="structTree.html">Tree</a> *T1, <a class="el" href="structTree.html">Tree</a> *T2)</td></tr>
-<tr class="memdesc:a3b21f1925f7071f46d93431a835217bb"><td class="mdescLeft"> </td><td class="mdescRight">Calculates the edit distance of the two trees. <a href="#a3b21f1925f7071f46d93431a835217bb"></a><br/></td></tr>
-<tr class="memitem:a21ad4de3ba4055aeef08b28c9ad48894"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a21ad4de3ba4055aeef08b28c9ad48894"></a>
-void </td><td class="memItemRight" valign="bottom"><a class="el" href="treedist_8h.html#a21ad4de3ba4055aeef08b28c9ad48894">print_tree</a> (<a class="el" href="structTree.html">Tree</a> *t)</td></tr>
-<tr class="memdesc:a21ad4de3ba4055aeef08b28c9ad48894"><td class="mdescLeft"> </td><td class="mdescRight">Print a tree (mainly for debugging) <br/></td></tr>
-<tr class="memitem:acbc1cb9bce582ea945e4a467c76a57aa"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="treedist_8h.html#acbc1cb9bce582ea945e4a467c76a57aa">free_tree</a> (<a class="el" href="structTree.html">Tree</a> *t)</td></tr>
-<tr class="memdesc:acbc1cb9bce582ea945e4a467c76a57aa"><td class="mdescLeft"> </td><td class="mdescRight">Free the memory allocated for <a class="el" href="structTree.html">Tree</a> t. <a href="#acbc1cb9bce582ea945e4a467c76a57aa"></a><br/></td></tr>
+<table border="0" cellpadding="0" cellspacing="0">
+<tr><td colspan="2"><h2>Functions</h2></td></tr>
+<tr><td class="memItemLeft" align="right" valign="top"><a class="el" href="structTree.html">Tree</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="treedist_8h.html#a08fe4d5afd385dce593b86eaf010c6e3">make_tree</a> (char *struc)</td></tr>
+<tr><td class="mdescLeft"> </td><td class="mdescRight">Constructs a <a class="el" href="structTree.html">Tree</a> ( essentially the postorder list ) of the structure 'struc', for use in <a class="el" href="treedist_8h.html#a3b21f1925f7071f46d93431a835217bb" title="Calculates the edit distance of the two trees.">tree_edit_distance()</a>. <a href="#a08fe4d5afd385dce593b86eaf010c6e3"></a><br/></td></tr>
+<tr><td class="memItemLeft" align="right" valign="top">float </td><td class="memItemRight" valign="bottom"><a class="el" href="treedist_8h.html#a3b21f1925f7071f46d93431a835217bb">tree_edit_distance</a> (<a class="el" href="structTree.html">Tree</a> *T1, <a class="el" href="structTree.html">Tree</a> *T2)</td></tr>
+<tr><td class="mdescLeft"> </td><td class="mdescRight">Calculates the edit distance of the two trees. <a href="#a3b21f1925f7071f46d93431a835217bb"></a><br/></td></tr>
+<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a21ad4de3ba4055aeef08b28c9ad48894"></a><!-- doxytag: member="treedist.h::print_tree" ref="a21ad4de3ba4055aeef08b28c9ad48894" args="(Tree *t)" -->
+void </td><td class="memItemRight" valign="bottom"><a class="el" href="treedist_8h.html#a21ad4de3ba4055aeef08b28c9ad48894">print_tree</a> (<a class="el" href="structTree.html">Tree</a> *t)</td></tr>
+<tr><td class="mdescLeft"> </td><td class="mdescRight">Print a tree (mainly for debugging). <br/></td></tr>
+<tr><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="treedist_8h.html#acbc1cb9bce582ea945e4a467c76a57aa">free_tree</a> (<a class="el" href="structTree.html">Tree</a> *t)</td></tr>
+<tr><td class="mdescLeft"> </td><td class="mdescRight">Free the memory allocated for <a class="el" href="structTree.html">Tree</a> t. <a href="#acbc1cb9bce582ea945e4a467c76a57aa"></a><br/></td></tr>
</table>
-<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
-<div class="textblock"><p>Functions for <a class="el" href="structTree.html">Tree</a> Edit Distances. </p>
-</div><hr/><h2>Function Documentation</h2>
-<a class="anchor" id="a08fe4d5afd385dce593b86eaf010c6e3"></a>
+<hr/><a name="_details"></a><h2>Detailed Description</h2>
+<p>Functions for <a class="el" href="structTree.html">Tree</a> Edit Distances. </p>
+<hr/><h2>Function Documentation</h2>
+<a class="anchor" id="a08fe4d5afd385dce593b86eaf010c6e3"></a><!-- doxytag: member="treedist.h::make_tree" ref="a08fe4d5afd385dce593b86eaf010c6e3" args="(char *struc)" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="structTree.html">Tree</a>* make_tree </td>
<td>(</td>
- <td class="paramtype">char * </td>
- <td class="paramname"><em>struc</em></td><td>)</td>
+ <td class="paramtype">char * </td>
+ <td class="paramname"> <em>struc</em></td>
+ <td> ) </td>
<td></td>
</tr>
</table>
-</div><div class="memdoc">
+</div>
+<div class="memdoc">
<p>Constructs a <a class="el" href="structTree.html">Tree</a> ( essentially the postorder list ) of the structure 'struc', for use in <a class="el" href="treedist_8h.html#a3b21f1925f7071f46d93431a835217bb" title="Calculates the edit distance of the two trees.">tree_edit_distance()</a>. </p>
-<dl class="params"><dt>Parameters:</dt><dd>
- <table class="params">
- <tr><td class="paramname">struc</td><td>may be any rooted structure representation. </td></tr>
+<dl><dt><b>Parameters:</b></dt><dd>
+ <table border="0" cellspacing="2" cellpadding="0">
+ <tr><td valign="top"></td><td valign="top"><em>struc</em> </td><td>may be any rooted structure representation. </td></tr>
</table>
</dd>
</dl>
-<dl class="section return"><dt>Returns:</dt><dd></dd></dl>
+<dl class="return"><dt><b>Returns:</b></dt><dd></dd></dl>
</div>
</div>
-<a class="anchor" id="a3b21f1925f7071f46d93431a835217bb"></a>
+<a class="anchor" id="a3b21f1925f7071f46d93431a835217bb"></a><!-- doxytag: member="treedist.h::tree_edit_distance" ref="a3b21f1925f7071f46d93431a835217bb" args="(Tree *T1, Tree *T2)" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">float tree_edit_distance </td>
<td>(</td>
- <td class="paramtype"><a class="el" href="structTree.html">Tree</a> * </td>
- <td class="paramname"><em>T1</em>, </td>
+ <td class="paramtype"><a class="el" href="structTree.html">Tree</a> * </td>
+ <td class="paramname"> <em>T1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
- <td class="paramtype"><a class="el" href="structTree.html">Tree</a> * </td>
- <td class="paramname"><em>T2</em> </td>
+ <td class="paramtype"><a class="el" href="structTree.html">Tree</a> * </td>
+ <td class="paramname"> <em>T2</em></td><td> </td>
</tr>
<tr>
<td></td>
<td>)</td>
- <td></td><td></td>
+ <td></td><td></td><td></td>
</tr>
</table>
-</div><div class="memdoc">
+</div>
+<div class="memdoc">
<p>Calculates the edit distance of the two trees. </p>
-<dl class="params"><dt>Parameters:</dt><dd>
- <table class="params">
- <tr><td class="paramname">T1</td><td></td></tr>
- <tr><td class="paramname">T2</td><td></td></tr>
+<dl><dt><b>Parameters:</b></dt><dd>
+ <table border="0" cellspacing="2" cellpadding="0">
+ <tr><td valign="top"></td><td valign="top"><em>T1</em> </td><td></td></tr>
+ <tr><td valign="top"></td><td valign="top"><em>T2</em> </td><td></td></tr>
</table>
</dd>
</dl>
-<dl class="section return"><dt>Returns:</dt><dd></dd></dl>
+<dl class="return"><dt><b>Returns:</b></dt><dd></dd></dl>
</div>
</div>
-<a class="anchor" id="acbc1cb9bce582ea945e4a467c76a57aa"></a>
+<a class="anchor" id="acbc1cb9bce582ea945e4a467c76a57aa"></a><!-- doxytag: member="treedist.h::free_tree" ref="acbc1cb9bce582ea945e4a467c76a57aa" args="(Tree *t)" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">void free_tree </td>
<td>(</td>
- <td class="paramtype"><a class="el" href="structTree.html">Tree</a> * </td>
- <td class="paramname"><em>t</em></td><td>)</td>
+ <td class="paramtype"><a class="el" href="structTree.html">Tree</a> * </td>
+ <td class="paramname"> <em>t</em></td>
+ <td> ) </td>
<td></td>
</tr>
</table>
-</div><div class="memdoc">
+</div>
+<div class="memdoc">
<p>Free the memory allocated for <a class="el" href="structTree.html">Tree</a> t. </p>
-<dl class="params"><dt>Parameters:</dt><dd>
- <table class="params">
- <tr><td class="paramname">t</td><td></td></tr>
+<dl><dt><b>Parameters:</b></dt><dd>
+ <table border="0" cellspacing="2" cellpadding="0">
+ <tr><td valign="top"></td><td valign="top"><em>t</em> </td><td></td></tr>
</table>
</dd>
</dl>
</div>
</div>
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- <li class="footer">Generated on Wed Jul 24 2013 13:38:59 for RNAlib-2.1.2 by
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- <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.1.1 </li>
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+<hr size="1"/><address style="text-align: right;"><small>Generated on 11 Apr 2017 for RNAlib-2.1.2 by
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