JWS-117 Compiled all tools with ./compilebin.sh and some were missing related files.

[jabaws.git] / binaries / src / ViennaRNA / doc / latex / 1_88_84__epars_8h.tex

diff --git a/binaries/src/ViennaRNA/doc/latex/1_88_84__epars_8h.tex b/binaries/src/ViennaRNA/doc/latex/1_88_84__epars_8h.tex
index bd0f092..a989f53 100644 (file)
--- a/binaries/src/ViennaRNA/doc/latex/1_88_84__epars_8h.tex
+++ b/binaries/src/ViennaRNA/doc/latex/1_88_84__epars_8h.tex
@@ -1,28 +1,27 @@
-\hypertarget{1_88_84__epars_8h}{\section{/home/asherstnev/\-Projects/\-Java.projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/lib/1.8.4\-\_\-epars.h File Reference}
-\label{1_88_84__epars_8h}\index{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/lib/1.\-8.\-4\-\_\-epars.\-h@{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/lib/1.\-8.\-4\-\_\-epars.\-h}}
+\hypertarget{1_88_84__epars_8h}{
+\section{/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/lib/1.8.4\_\-epars.h File Reference}
+\label{1_88_84__epars_8h}\index{/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/lib/1.8.4\_\-epars.h@{/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/lib/1.8.4\_\-epars.h}}
 }
 
 
 Free energy parameters for parameter file conversion.  
 
 
-
-
 \subsection{Detailed Description}
-Free energy parameters for parameter file conversion. This file contains the free energy parameters used in Vienna\-R\-N\-A\-Package 1.\-8.\-4. They are summarized in\-:
+Free energy parameters for parameter file conversion. This file contains the free energy parameters used in ViennaRNAPackage 1.8.4. They are summarized in:
 
-D.\-H.\-Mathews, J. Sabina, M. Z\-Uker, D.\-H. Turner \char`\"{}\-Expanded sequence dependence of thermodynamic parameters improves
-prediction of R\-N\-A secondary structure\char`\"{} J\-M\-B, 288, pp 911-\/940, 1999
+D.H.Mathews, J. Sabina, M. ZUker, D.H. Turner \char`\"{}Expanded sequence dependence of thermodynamic parameters improves
+    prediction of RNA secondary structure\char`\"{} JMB, 288, pp 911-\/940, 1999
 
-Enthalpies taken from\-:
+Enthalpies taken from:
 
 A. Walter, D Turner, J Kim, M Lyttle, P M\char`\"{}uller, D Mathews, M Zuker
-\char`\"{}Coaxial stckaing of helices enhances binding of oligoribonucleotides.." P\-N\-A\-S, 91, pp 9218-\/9222, 1994
+    \char`\"{}Coaxial stckaing of helices enhances binding of oligoribonucleotides.. PNAS, 91, pp 9218-\/9222, 1994
 
-D.\-H. Turner, N. Sugimoto, and S.\-M. Freier. \char`\"{}\-R\-N\-A Structure Prediction\char`\"{}, Ann. Rev. Biophys. Biophys. Chem. 17, 167-\/192, 1988.
+D.H. Turner, N. Sugimoto, and S.M. Freier. \char`\"{}RNA Structure Prediction\char`\"{}, Ann. Rev. Biophys. Biophys. Chem. 17, 167-\/192, 1988.
 
-John A.\-Jaeger, Douglas H.\-Turner, and Michael Zuker. \char`\"{}\-Improved predictions of secondary structures for R\-N\-A\char`\"{}, P\-N\-A\-S, 86, 7706-\/7710, October 1989.
+John A.Jaeger, Douglas H.Turner, and Michael Zuker. \char`\"{}Improved predictions of secondary structures for RNA\char`\"{}, PNAS, 86, 7706-\/7710, October 1989.
 
-L. He, R. Kierzek, J. Santa\-Lucia, A.\-E. Walter, D.\-H. Turner \char`\"{}\-Nearest-\/\-Neughbor Parameters for G\-U Mismatches....\char`\"{} Biochemistry 1991, 30 11124-\/11132
+L. He, R. Kierzek, J. SantaLucia, A.E. Walter, D.H. Turner \char`\"{}Nearest-\/Neughbor Parameters for GU Mismatches....\char`\"{} Biochemistry 1991, 30 11124-\/11132
 
-A.\-E. Peritz, R. Kierzek, N, Sugimoto, D.\-H. Turner \char`\"{}\-Thermodynamic Study of Internal Loops in Oligoribonucleotides...\char`\"{} Biochemistry 1991, 30, 6428--6435 
\ No newline at end of file
+A.E. Peritz, R. Kierzek, N, Sugimoto, D.H. Turner \char`\"{}Thermodynamic Study of Internal Loops in Oligoribonucleotides...\char`\"{} Biochemistry 1991, 30, 6428-\/-\/6435 
\ No newline at end of file