Add missing doc files

[jabaws.git] / binaries / src / ViennaRNA / doc / latex / 2Dfold_8h.tex

diff --git a/binaries/src/ViennaRNA/doc/latex/2Dfold_8h.tex b/binaries/src/ViennaRNA/doc/latex/2Dfold_8h.tex
new file mode 100644 (file)
index 0000000..0d3e519
--- /dev/null
+++ b/binaries/src/ViennaRNA/doc/latex/2Dfold_8h.tex
@@ -0,0 +1,22 @@
+\hypertarget{2Dfold_8h}{\section{/home/asherstnev/\-Projects/\-Java.projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/2\-Dfold.h File Reference}
+\label{2Dfold_8h}\index{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/2\-Dfold.\-h@{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/2\-Dfold.\-h}}
+}
+Include dependency graph for 2\-Dfold.h\-:
+\nopagebreak
+\begin{figure}[H]
+\begin{center}
+\leavevmode
+\includegraphics[width=250pt]{2Dfold_8h__incl}
+\end{center}
+\end{figure}
+\subsection*{Functions}
+\begin{DoxyCompactItemize}
+\item 
+\hyperlink{structTwoDfold__vars}{Two\-Dfold\-\_\-vars} $\ast$ \hyperlink{group__kl__neighborhood__mfe_gac9284f132cf0eaa0a2f43590eda05488}{get\-\_\-\-Two\-Dfold\-\_\-variables} (const char $\ast$seq, const char $\ast$structure1, const char $\ast$structure2, int \hyperlink{fold__vars_8h_af9202a1a09f5828dc731e2d9a10fa111}{circ})
+\begin{DoxyCompactList}\small\item\em Get a structure of type \hyperlink{structTwoDfold__vars}{Two\-Dfold\-\_\-vars} prefilled with current global settings. \end{DoxyCompactList}\item 
+void \hyperlink{group__kl__neighborhood__mfe_ga05bf4f31d216b1b160fd2d3d68e9b487}{destroy\-\_\-\-Two\-Dfold\-\_\-variables} (\hyperlink{structTwoDfold__vars}{Two\-Dfold\-\_\-vars} $\ast$our\-\_\-variables)
+\begin{DoxyCompactList}\small\item\em Destroy a \hyperlink{structTwoDfold__vars}{Two\-Dfold\-\_\-vars} datastructure without memory loss. \end{DoxyCompactList}\item 
+\hyperlink{structTwoDfold__solution}{Two\-Dfold\-\_\-solution} $\ast$ \hyperlink{group__kl__neighborhood__mfe_ga47da790166020558d27323aef489703e}{Two\-Dfold\-List} (\hyperlink{structTwoDfold__vars}{Two\-Dfold\-\_\-vars} $\ast$vars, int distance1, int distance2)
+\begin{DoxyCompactList}\small\item\em Compute M\-F\-E's and representative for distance partitioning. \end{DoxyCompactList}\item 
+char $\ast$ \hyperlink{group__kl__neighborhood__mfe_gaf4dc05bf8fc1ea53acd7aeb798ba80c2}{Two\-Dfold\-\_\-backtrack\-\_\-f5} (unsigned int j, int k, int l, \hyperlink{structTwoDfold__vars}{Two\-Dfold\-\_\-vars} $\ast$vars)
+\begin{DoxyCompactList}\small\item\em Backtrack a minimum free energy structure from a 5' section of specified length. \end{DoxyCompactList}\end{DoxyCompactItemize}