Add missing doc files

[jabaws.git] / binaries / src / ViennaRNA / doc / latex / PKplex_8h_source.tex

diff --git a/binaries/src/ViennaRNA/doc/latex/PKplex_8h_source.tex b/binaries/src/ViennaRNA/doc/latex/PKplex_8h_source.tex
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+\hypertarget{PKplex_8h}{\section{P\-Kplex.\-h}
+\label{PKplex_8h}\index{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/\-P\-Kplex.\-h@{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/\-P\-Kplex.\-h}}
+}
+
+\begin{DoxyCode}
+00001 \textcolor{preprocessor}{#ifndef PKPLEX\_H}
+00002 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define PKPLEX\_H}
+00003 \textcolor{preprocessor}{}
+00004 \textcolor{preprocessor}{#include "\hyperlink{data__structures_8h}{data\_structures.h}"}
+00005 
+00006 \textcolor{keyword}{extern} \hyperlink{structdupVar}{dupVar} *PlexHits;
+00007 \textcolor{keyword}{extern} \textcolor{keywordtype}{int}    PlexHitsArrayLength;
+00008 \textcolor{keyword}{extern} \textcolor{keywordtype}{int}    NumberOfHits;
+00009 \textcolor{keyword}{extern} \textcolor{keywordtype}{int}    verbose;
+00010 
+00011 
+00015 \hyperlink{structdupVar}{dupVar}  **PKLduplexfold\_XS( \textcolor{keyword}{const} \textcolor{keywordtype}{char} *s1,
+00016                             \textcolor{keywordtype}{int} **access\_s1,
+00017                             \textcolor{keyword}{const} \textcolor{keywordtype}{int} threshold,
+00018                             \textcolor{keyword}{const} \textcolor{keywordtype}{int} alignment\_length,
+00019                             \textcolor{keyword}{const} \textcolor{keywordtype}{int} delta);
+00020 
+00021 \textcolor{keywordtype}{int}     arraySize(\hyperlink{structduplexT}{duplexT} **array);
+00022 
+00023 \textcolor{keywordtype}{void}    freeDuplexT(\hyperlink{structduplexT}{duplexT} **array);
+00024 
+00025 \textcolor{preprocessor}{#endif}
+\end{DoxyCode}