--- /dev/null
+\hypertarget{PS__dot_8h}{\section{P\-S\-\_\-dot.\-h}
+\label{PS__dot_8h}\index{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/\-P\-S\-\_\-dot.\-h@{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/\-P\-S\-\_\-dot.\-h}}
+}
+
+\begin{DoxyCode}
+00001 \textcolor{preprocessor}{#ifndef \_\_VIENNA\_RNA\_PACKAGE\_PS\_DOT\_H\_\_}
+00002 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define \_\_VIENNA\_RNA\_PACKAGE\_PS\_DOT\_H\_\_}
+00003 \textcolor{preprocessor}{}
+00004 \textcolor{preprocessor}{#include "\hyperlink{data__structures_8h}{data\_structures.h}"}
+00005 \textcolor{preprocessor}{#include "\hyperlink{plot__layouts_8h}{plot\_layouts.h}"}
+00006
+00007 \textcolor{preprocessor}{#ifdef \_\_GNUC\_\_}
+00008 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define DEPRECATED(func) func \_\_attribute\_\_ ((deprecated))}
+00009 \textcolor{preprocessor}{}\textcolor{preprocessor}{#else}
+00010 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define DEPRECATED(func) func}
+00011 \textcolor{preprocessor}{}\textcolor{preprocessor}{#endif}
+00012 \textcolor{preprocessor}{}
+00019 \textcolor{comment}{/* write PostScript drawing of structure to file with annotation */}
+00020 \textcolor{keywordtype}{int} PS\_rna\_plot\_snoop\_a(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00021 \textcolor{keywordtype}{char} *structure,
+00022 \textcolor{keywordtype}{char} *ssfile,
+00023 \textcolor{keywordtype}{int} *relative\_access,
+00024 \textcolor{keyword}{const} \textcolor{keywordtype}{char} *seqs[]);
+00025
+00038 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a0873c7cc4cd7a11c9a2cea19dde7e9c9}{PS\_rna\_plot}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00039 \textcolor{keywordtype}{char} *structure,
+00040 \textcolor{keywordtype}{char} *file);
+00041
+00060 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a47856b2504b566588785597b6ebb8271}{PS\_rna\_plot\_a}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00061 \textcolor{keywordtype}{char} *structure,
+00062 \textcolor{keywordtype}{char} *file,
+00063 \textcolor{keywordtype}{char} *pre,
+00064 \textcolor{keywordtype}{char} *post);
+00065
+00066 \textcolor{keywordtype}{int} PS\_rna\_plot\_a\_gquad(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00067 \textcolor{keywordtype}{char} *structure,
+00068 \textcolor{keywordtype}{char} *ssfile,
+00069 \textcolor{keywordtype}{char} *pre,
+00070 \textcolor{keywordtype}{char} *post);
+00071
+00084 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a70834bc8c0aad4fe6824ff76ccb8f329}{gmlRNA}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00085 \textcolor{keywordtype}{char} *structure,
+00086 \textcolor{keywordtype}{char} *ssfile,
+00087 \textcolor{keywordtype}{char} option);
+00088
+00099 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_add368528755f9a830727b680243541df}{ssv\_rna\_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00100 \textcolor{keywordtype}{char} *structure,
+00101 \textcolor{keywordtype}{char} *ssfile);
+00102
+00111 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_ae7853539b5df98f294b4af434e979304}{svg\_rna\_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00112 \textcolor{keywordtype}{char} *structure,
+00113 \textcolor{keywordtype}{char} *ssfile);
+00114
+00123 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a2f6d5953e6a323df898896b8d6614483}{xrna\_plot}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00124 \textcolor{keywordtype}{char} *structure,
+00125 \textcolor{keywordtype}{char} *ssfile);
+00126
+00127 \textcolor{keywordtype}{int} PS\_color\_dot\_plot(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00128 \hyperlink{structcpair}{cpair} *pi,
+00129 \textcolor{keywordtype}{char} *filename);
+00130
+00131 \textcolor{keywordtype}{int} PS\_color\_dot\_plot\_turn( \textcolor{keywordtype}{char} *seq,
+00132 \hyperlink{structcpair}{cpair} *pi,
+00133 \textcolor{keywordtype}{char} *filename,
+00134 \textcolor{keywordtype}{int} winSize);
+00135
+00155 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a00ea223b5cf02eb2faae5ff29f0d5e12}{PS\_dot\_plot\_list}( \textcolor{keywordtype}{char} *seq,
+00156 \textcolor{keywordtype}{char} *filename,
+00157 \hyperlink{structplist}{plist} *pl,
+00158 \hyperlink{structplist}{plist} *mf,
+00159 \textcolor{keywordtype}{char} *comment);
+00160
+00161 \textcolor{keywordtype}{int} PS\_dot\_plot\_turn( \textcolor{keywordtype}{char} *seq,
+00162 \textcolor{keyword}{struct} \hyperlink{structplist}{plist} *pl,
+00163 \textcolor{keywordtype}{char} *filename,
+00164 \textcolor{keywordtype}{int} winSize);
+00165
+00166 \textcolor{keywordtype}{int} PS\_color\_aln( \textcolor{keyword}{const} \textcolor{keywordtype}{char} *structure,
+00167 \textcolor{keyword}{const} \textcolor{keywordtype}{char} *filename,
+00168 \textcolor{keyword}{const} \textcolor{keywordtype}{char} *seqs[],
+00169 \textcolor{keyword}{const} \textcolor{keywordtype}{char} *names[]);
+00170
+00174 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_aab48d4dac655d688abe921389ac2847c}{aliPS\_color\_aln}(\textcolor{keyword}{const} \textcolor{keywordtype}{char} *structure,
+00175 \textcolor{keyword}{const} \textcolor{keywordtype}{char} *filename,
+00176 \textcolor{keyword}{const} \textcolor{keywordtype}{char} *seqs[],
+00177 \textcolor{keyword}{const} \textcolor{keywordtype}{char} *names[]);
+00178
+00179
+00195 DEPRECATED(\textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a689a97a7e3b8a2df14728b8204d9d57b}{PS\_dot\_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00196 \textcolor{keywordtype}{char} *file));
+00197 \textcolor{preprocessor}{#endif}
+\end{DoxyCode}
git://source.jalview.org / jabaws.git / blobdiff