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JWS-117 Compiled all tools with ./compilebin.sh and some were missing related files.
[jabaws.git] / binaries / src / ViennaRNA / doc / latex / PS__dot_8h_source.tex
diff --git a/binaries/src/ViennaRNA/doc/latex/PS__dot_8h_source.tex b/binaries/src/ViennaRNA/doc/latex/PS__dot_8h_source.tex
index 193405a..47d3467 100644 (file)
--- a/binaries/src/ViennaRNA/doc/latex/PS__dot_8h_source.tex
+++ b/binaries/src/ViennaRNA/doc/latex/PS__dot_8h_source.tex
@@ -1,13 +1,14 @@
-\hypertarget{PS__dot_8h}{\section{P\-S\-\_\-dot.\-h}
-\label{PS__dot_8h}\index{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/\-P\-S\-\_\-dot.\-h@{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/\-P\-S\-\_\-dot.\-h}}
+\hypertarget{PS__dot_8h_source}{
+\section{/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/PS\_\-dot.h}
 }
 
-\begin{DoxyCode}
+
+\begin{footnotesize}\begin{alltt}
 00001 \textcolor{preprocessor}{#ifndef \_\_VIENNA\_RNA\_PACKAGE\_PS\_DOT\_H\_\_}
 00002 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define \_\_VIENNA\_RNA\_PACKAGE\_PS\_DOT\_H\_\_}
 00003 \textcolor{preprocessor}{}
-00004 \textcolor{preprocessor}{#include "\hyperlink{data__structures_8h}{data\_structures.h}"}
-00005 \textcolor{preprocessor}{#include "\hyperlink{plot__layouts_8h}{plot\_layouts.h}"}
+00004 \textcolor{preprocessor}{#include "\hyperlink{data__structures_8h}{data_structures.h}"}
+00005 \textcolor{preprocessor}{#include "\hyperlink{plot__layouts_8h}{plot_layouts.h}"}
 00006 
 00007 \textcolor{preprocessor}{#ifdef \_\_GNUC\_\_}
 00008 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define DEPRECATED(func) func \_\_attribute\_\_ ((deprecated))}
@@ -22,11 +23,11 @@
 00023                         \textcolor{keywordtype}{int} *relative\_access,
 00024                         \textcolor{keyword}{const} \textcolor{keywordtype}{char} *seqs[]);
 00025 
-00038 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a0873c7cc4cd7a11c9a2cea19dde7e9c9}{PS\_rna\_plot}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00038 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a0873c7cc4cd7a11c9a2cea19dde7e9c9}{PS_rna_plot}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
 00039                 \textcolor{keywordtype}{char} *structure,
 00040                 \textcolor{keywordtype}{char} *file);
 00041 
-00060 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a47856b2504b566588785597b6ebb8271}{PS\_rna\_plot\_a}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00060 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a47856b2504b566588785597b6ebb8271}{PS_rna_plot_a}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
 00061                   \textcolor{keywordtype}{char} *structure,
 00062                   \textcolor{keywordtype}{char} *file,
 00063                   \textcolor{keywordtype}{char} *pre,
@@ -43,15 +44,15 @@
 00086             \textcolor{keywordtype}{char} *ssfile,
 00087             \textcolor{keywordtype}{char} option);
 00088 
-00099 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_add368528755f9a830727b680243541df}{ssv\_rna\_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00099 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_add368528755f9a830727b680243541df}{ssv_rna_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
 00100                   \textcolor{keywordtype}{char} *structure,
 00101                   \textcolor{keywordtype}{char} *ssfile);
 00102 
-00111 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_ae7853539b5df98f294b4af434e979304}{svg\_rna\_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00111 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_ae7853539b5df98f294b4af434e979304}{svg_rna_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
 00112                   \textcolor{keywordtype}{char} *structure,
 00113                   \textcolor{keywordtype}{char} *ssfile);
 00114 
-00123 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a2f6d5953e6a323df898896b8d6614483}{xrna\_plot}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00123 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a2f6d5953e6a323df898896b8d6614483}{xrna_plot}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
 00124               \textcolor{keywordtype}{char} *structure,
 00125               \textcolor{keywordtype}{char} *ssfile);
 00126 
@@ -64,7 +65,7 @@
 00133                             \textcolor{keywordtype}{char} *filename,
 00134                             \textcolor{keywordtype}{int} winSize);
 00135 
-00155 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a00ea223b5cf02eb2faae5ff29f0d5e12}{PS\_dot\_plot\_list}( \textcolor{keywordtype}{char} *seq,
+00155 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a00ea223b5cf02eb2faae5ff29f0d5e12}{PS_dot_plot_list}( \textcolor{keywordtype}{char} *seq,
 00156                       \textcolor{keywordtype}{char} *filename,
 00157                       \hyperlink{structplist}{plist} *pl,
 00158                       \hyperlink{structplist}{plist} *mf,
@@ -80,13 +81,13 @@
 00168                   \textcolor{keyword}{const} \textcolor{keywordtype}{char} *seqs[],
 00169                   \textcolor{keyword}{const} \textcolor{keywordtype}{char} *names[]);
 00170 
-00174 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_aab48d4dac655d688abe921389ac2847c}{aliPS\_color\_aln}(\textcolor{keyword}{const} \textcolor{keywordtype}{char} *structure,
+00174 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_aab48d4dac655d688abe921389ac2847c}{aliPS_color_aln}(\textcolor{keyword}{const} \textcolor{keywordtype}{char} *structure,
 00175                     \textcolor{keyword}{const} \textcolor{keywordtype}{char} *filename, 
 00176                     \textcolor{keyword}{const} \textcolor{keywordtype}{char} *seqs[],
 00177                     \textcolor{keyword}{const} \textcolor{keywordtype}{char} *names[]); 
 00178 
 00179 
-00195 DEPRECATED(\textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a689a97a7e3b8a2df14728b8204d9d57b}{PS\_dot\_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
+00195 DEPRECATED(\textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a689a97a7e3b8a2df14728b8204d9d57b}{PS_dot_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
 00196                             \textcolor{keywordtype}{char} *file));
 00197 \textcolor{preprocessor}{#endif}
-\end{DoxyCode}
+\end{alltt}\end{footnotesize}