Add missing doc files
[jabaws.git] / binaries / src / ViennaRNA / doc / latex / group__consensus__fold.aux
diff --git a/binaries/src/ViennaRNA/doc/latex/group__consensus__fold.aux b/binaries/src/ViennaRNA/doc/latex/group__consensus__fold.aux
new file mode 100644 (file)
index 0000000..9e97e4f
--- /dev/null
@@ -0,0 +1,77 @@
+\relax 
+\@writefile{toc}{\contentsline {section}{\numberline {9.14}Predicting Consensus Structures from Alignment(s)}{50}{section.9.14}}
+\newlabel{group__consensus__fold}{{9.14}{50}{Predicting Consensus Structures from Alignment(s)\relax }{section.9.14}{}}
+\newlabel{group__consensus__fold_ga5e125c9586fcd4e2e1559fe76f7289cc}{{9.14}{50}{Functions\relax }{section*.32}{}}
+\citation{hofacker:2002}
+\citation{bernhart:2008}
+\gdef \LT@xxix {\LT@entry 
+    {1}{78.18367pt}\LT@entry 
+    {1}{380.5249pt}}
+\gdef \LT@xxx {\LT@entry 
+    {1}{78.18367pt}\LT@entry 
+    {1}{380.5249pt}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {9.14.1}Detailed Description}{51}{subsection.9.14.1}}
+\@writefile{brf}{\backcite{hofacker:2002}{{51}{9.14.1}{subsection.9.14.1}}}
+\@writefile{brf}{\backcite{bernhart:2008}{{51}{9.14.1}{subsection.9.14.1}}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {9.14.2}Function Documentation}{51}{subsection.9.14.2}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {9.14.2.1}get\discretionary {-}{}{}\_\discretionary {-}{}{}mpi}{51}{subsubsection.9.14.2.1}}
+\newlabel{group__consensus__fold_gaa2d600be90844094ec145ea14a314d2f}{{9.14.2.1}{51}{get\-\_\-mpi\relax }{subsubsection.9.14.2.1}{}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {9.14.2.2}energy\discretionary {-}{}{}\_\discretionary {-}{}{}of\discretionary {-}{}{}\_\discretionary {-}{}{}alistruct}{51}{subsubsection.9.14.2.2}}
+\newlabel{group__consensus__fold_ga1c48869c03b49a342bf4cbdd61900081}{{9.14.2.2}{51}{energy\-\_\-of\-\_\-alistruct\relax }{subsubsection.9.14.2.2}{}}
+\gdef \LT@xxxi {\LT@entry 
+    {1}{78.18367pt}\LT@entry 
+    {1}{380.5249pt}}
+\gdef \LT@xxxii {\LT@entry 
+    {1}{78.18367pt}\LT@entry 
+    {1}{380.5249pt}}
+\gdef \LT@xxxiii {\LT@entry 
+    {1}{78.18367pt}\LT@entry 
+    {1}{380.5249pt}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {9.14.2.3}encode\discretionary {-}{}{}\_\discretionary {-}{}{}ali\discretionary {-}{}{}\_\discretionary {-}{}{}sequence}{52}{subsubsection.9.14.2.3}}
+\newlabel{group__consensus__fold_gaa3e40277c837d6f7603afe319884c786}{{9.14.2.3}{52}{encode\-\_\-ali\-\_\-sequence\relax }{subsubsection.9.14.2.3}{}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {9.14.2.4}alloc\discretionary {-}{}{}\_\discretionary {-}{}{}sequence\discretionary {-}{}{}\_\discretionary {-}{}{}arrays}{52}{subsubsection.9.14.2.4}}
+\newlabel{group__consensus__fold_ga8a560930f7f2582cc3967723a86cfdfa}{{9.14.2.4}{52}{alloc\-\_\-sequence\-\_\-arrays\relax }{subsubsection.9.14.2.4}{}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {9.14.2.5}free\discretionary {-}{}{}\_\discretionary {-}{}{}sequence\discretionary {-}{}{}\_\discretionary {-}{}{}arrays}{52}{subsubsection.9.14.2.5}}
+\newlabel{group__consensus__fold_ga298a420a8c879202e2617b3f724fde38}{{9.14.2.5}{52}{free\-\_\-sequence\-\_\-arrays\relax }{subsubsection.9.14.2.5}{}}
+\gdef \LT@xxxiv {\LT@entry 
+    {1}{78.18367pt}\LT@entry 
+    {1}{380.5249pt}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {9.14.2.6}get\discretionary {-}{}{}\_\discretionary {-}{}{}alipf\discretionary {-}{}{}\_\discretionary {-}{}{}arrays}{53}{subsubsection.9.14.2.6}}
+\newlabel{group__consensus__fold_ga0cc49457fd79eeb04d4a7f97c868b09b}{{9.14.2.6}{53}{get\-\_\-alipf\-\_\-arrays\relax }{subsubsection.9.14.2.6}{}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {9.14.3}Variable Documentation}{53}{subsection.9.14.3}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {9.14.3.1}cv\discretionary {-}{}{}\_\discretionary {-}{}{}fact}{53}{subsubsection.9.14.3.1}}
+\newlabel{group__consensus__fold_gaf3cbac6ff5d706d6e414677841ddf94c}{{9.14.3.1}{53}{cv\-\_\-fact\relax }{subsubsection.9.14.3.1}{}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {9.14.3.2}nc\discretionary {-}{}{}\_\discretionary {-}{}{}fact}{53}{subsubsection.9.14.3.2}}
+\newlabel{group__consensus__fold_ga502948a122a2af5b914355b1f3ea2f61}{{9.14.3.2}{53}{nc\-\_\-fact\relax }{subsubsection.9.14.3.2}{}}
+\@setckpt{group__consensus__fold}{
+\setcounter{page}{54}
+\setcounter{equation}{0}
+\setcounter{enumi}{0}
+\setcounter{enumii}{0}
+\setcounter{enumiii}{0}
+\setcounter{enumiv}{0}
+\setcounter{footnote}{0}
+\setcounter{mpfootnote}{0}
+\setcounter{part}{0}
+\setcounter{chapter}{9}
+\setcounter{section}{14}
+\setcounter{subsection}{3}
+\setcounter{subsubsection}{2}
+\setcounter{paragraph}{0}
+\setcounter{subparagraph}{0}
+\setcounter{figure}{0}
+\setcounter{table}{34}
+\setcounter{NAT@ctr}{0}
+\setcounter{float@type}{8}
+\setcounter{lstnumber}{1}
+\setcounter{Item}{0}
+\setcounter{Hfootnote}{0}
+\setcounter{bookmark@seq@number}{94}
+\setcounter{lofdepth}{1}
+\setcounter{lotdepth}{1}
+\setcounter{LT@tables}{34}
+\setcounter{LT@chunks}{1}
+\setcounter{PWSTtable}{0}
+\setcounter{lstlisting}{0}
+\setcounter{section@level}{3}
+}