JWS-117 Compiled all tools with ./compilebin.sh and some were missing related files.

[jabaws.git] / binaries / src / ViennaRNA / doc / latex / group__local__consensus__fold.tex

diff --git a/binaries/src/ViennaRNA/doc/latex/group__local__consensus__fold.tex b/binaries/src/ViennaRNA/doc/latex/group__local__consensus__fold.tex
index 52effd9..e96ed6d 100644 (file)
--- a/binaries/src/ViennaRNA/doc/latex/group__local__consensus__fold.tex
+++ b/binaries/src/ViennaRNA/doc/latex/group__local__consensus__fold.tex
@@ -1,43 +1,32 @@
-\hypertarget{group__local__consensus__fold}{\section{Local M\-F\-E consensus structures for Sequence Alignments}
-\label{group__local__consensus__fold}\index{Local M\-F\-E consensus structures for Sequence Alignments@{Local M\-F\-E consensus structures for Sequence Alignments}}
+\hypertarget{group__local__consensus__fold}{
+\section{Local MFE consensus structures for Sequence Alignments}
+\label{group__local__consensus__fold}\index{Local MFE consensus structures for Sequence Alignments@{Local MFE consensus structures for Sequence Alignments}}
 }
-Collaboration diagram for Local M\-F\-E consensus structures for Sequence Alignments\-:
-\nopagebreak
+
+
+Collaboration diagram for Local MFE consensus structures for Sequence Alignments:\nopagebreak
 \begin{figure}[H]
 \begin{center}
 \leavevmode
-\includegraphics[width=350pt]{group__local__consensus__fold}
+\includegraphics[width=311pt]{group__local__consensus__fold}
 \end{center}
 \end{figure}
 \subsection*{Functions}
 \begin{DoxyCompactItemize}
 \item 
-float \hyperlink{group__local__consensus__fold_ga20a173a3cdb83f5d1778e36c1a6b1f2b}{ali\-Lfold} (const char $\ast$$\ast$strings, char $\ast$structure, int maxdist)
+float \hyperlink{group__local__consensus__fold_ga20a173a3cdb83f5d1778e36c1a6b1f2b}{aliLfold} (const char $\ast$$\ast$strings, char $\ast$structure, int maxdist)
 \end{DoxyCompactItemize}
 
 
-\subsection{Detailed Description}
-
-
 \subsection{Function Documentation}
-\hypertarget{group__local__consensus__fold_ga20a173a3cdb83f5d1778e36c1a6b1f2b}{\index{Local M\-F\-E consensus structures for Sequence Alignments@{Local M\-F\-E consensus structures for Sequence Alignments}!ali\-Lfold@{ali\-Lfold}}
-\index{ali\-Lfold@{ali\-Lfold}!Local MFE consensus structures for Sequence Alignments@{Local M\-F\-E consensus structures for Sequence Alignments}}
-\subsubsection[{ali\-Lfold}]{\setlength{\rightskip}{0pt plus 5cm}float ali\-Lfold (
-\begin{DoxyParamCaption}
-\item[{const char $\ast$$\ast$}]{strings, }
-\item[{char $\ast$}]{structure, }
-\item[{int}]{maxdist}
-\end{DoxyParamCaption}
-)}}\label{group__local__consensus__fold_ga20a173a3cdb83f5d1778e36c1a6b1f2b}
+\hypertarget{group__local__consensus__fold_ga20a173a3cdb83f5d1778e36c1a6b1f2b}{
+\index{local\_\-consensus\_\-fold@{local\_\-consensus\_\-fold}!aliLfold@{aliLfold}}
+\index{aliLfold@{aliLfold}!local_consensus_fold@{local\_\-consensus\_\-fold}}
+\subsubsection[{aliLfold}]{\setlength{\rightskip}{0pt plus 5cm}float aliLfold (const char $\ast$$\ast$ {\em strings}, \/  char $\ast$ {\em structure}, \/  int {\em maxdist})}}
+\label{group__local__consensus__fold_ga20a173a3cdb83f5d1778e36c1a6b1f2b}
 
 \begin{DoxyParams}{Parameters}
-{\em strings} & \\
-\hline
-{\em structure} & \\
-\hline
-{\em maxdist} & \\
-\hline
-\end{DoxyParams}
+\item[{\em strings}]\item[{\em structure}]\item[{\em maxdist}]\end{DoxyParams}
 \begin{DoxyReturn}{Returns}
 
 \end{DoxyReturn}