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[jabaws.git] / binaries / src / ViennaRNA / doc / latex / stringdist_8h.tex

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+\hypertarget{stringdist_8h}{\section{/home/asherstnev/\-Projects/\-Java.projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/stringdist.h File Reference}
+\label{stringdist_8h}\index{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/stringdist.\-h@{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/stringdist.\-h}}
+}
+
+
+Functions for String Alignment.  
+
+
+Include dependency graph for stringdist.\-h\-:
+\nopagebreak
+\begin{figure}[H]
+\begin{center}
+\leavevmode
+\includegraphics[width=250pt]{stringdist_8h__incl}
+\end{center}
+\end{figure}
+\subsection*{Functions}
+\begin{DoxyCompactItemize}
+\item 
+\hyperlink{structswString}{sw\-String} $\ast$ \hyperlink{stringdist_8h_a3125991b3a403b3f89230474deb3f22e}{Make\-\_\-sw\-String} (char $\ast$string)
+\begin{DoxyCompactList}\small\item\em Convert a structure into a format suitable for \hyperlink{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{string\-\_\-edit\-\_\-distance()}. \end{DoxyCompactList}\item 
+float \hyperlink{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{string\-\_\-edit\-\_\-distance} (\hyperlink{structswString}{sw\-String} $\ast$T1, \hyperlink{structswString}{sw\-String} $\ast$T2)
+\begin{DoxyCompactList}\small\item\em Calculate the string edit distance of T1 and T2. \end{DoxyCompactList}\end{DoxyCompactItemize}
+
+
+\subsection{Detailed Description}
+Functions for String Alignment. 
+
+\subsection{Function Documentation}
+\hypertarget{stringdist_8h_a3125991b3a403b3f89230474deb3f22e}{\index{stringdist.\-h@{stringdist.\-h}!Make\-\_\-sw\-String@{Make\-\_\-sw\-String}}
+\index{Make\-\_\-sw\-String@{Make\-\_\-sw\-String}!stringdist.h@{stringdist.\-h}}
+\subsubsection[{Make\-\_\-sw\-String}]{\setlength{\rightskip}{0pt plus 5cm}{\bf sw\-String}$\ast$ Make\-\_\-sw\-String (
+\begin{DoxyParamCaption}
+\item[{char $\ast$}]{string}
+\end{DoxyParamCaption}
+)}}\label{stringdist_8h_a3125991b3a403b3f89230474deb3f22e}
+
+
+Convert a structure into a format suitable for \hyperlink{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{string\-\_\-edit\-\_\-distance()}. 
+
+
+\begin{DoxyParams}{Parameters}
+{\em string} & \\
+\hline
+\end{DoxyParams}
+\begin{DoxyReturn}{Returns}
+
+\end{DoxyReturn}
+\hypertarget{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{\index{stringdist.\-h@{stringdist.\-h}!string\-\_\-edit\-\_\-distance@{string\-\_\-edit\-\_\-distance}}
+\index{string\-\_\-edit\-\_\-distance@{string\-\_\-edit\-\_\-distance}!stringdist.h@{stringdist.\-h}}
+\subsubsection[{string\-\_\-edit\-\_\-distance}]{\setlength{\rightskip}{0pt plus 5cm}float string\-\_\-edit\-\_\-distance (
+\begin{DoxyParamCaption}
+\item[{{\bf sw\-String} $\ast$}]{T1, }
+\item[{{\bf sw\-String} $\ast$}]{T2}
+\end{DoxyParamCaption}
+)}}\label{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}
+
+
+Calculate the string edit distance of T1 and T2. 
+
+
+\begin{DoxyParams}{Parameters}
+{\em T1} & \\
+\hline
+{\em T2} & \\
+\hline
+\end{DoxyParams}
+\begin{DoxyReturn}{Returns}
+
+\end{DoxyReturn}