JWS-117 Compiled all tools with ./compilebin.sh and some were missing related files.

[jabaws.git] / binaries / src / ViennaRNA / doc / latex / structTwoDfold__solution.tex

diff --git a/binaries/src/ViennaRNA/doc/latex/structTwoDfold__solution.tex b/binaries/src/ViennaRNA/doc/latex/structTwoDfold__solution.tex
index f143811..4c3ac83 100644 (file)
--- a/binaries/src/ViennaRNA/doc/latex/structTwoDfold__solution.tex
+++ b/binaries/src/ViennaRNA/doc/latex/structTwoDfold__solution.tex
@@ -1,40 +1,45 @@
-\hypertarget{structTwoDfold__solution}{\section{Two\-Dfold\-\_\-solution Struct Reference}
-\label{structTwoDfold__solution}\index{Two\-Dfold\-\_\-solution@{Two\-Dfold\-\_\-solution}}
+\hypertarget{structTwoDfold__solution}{
+\section{TwoDfold\_\-solution Struct Reference}
+\label{structTwoDfold__solution}\index{TwoDfold\_\-solution@{TwoDfold\_\-solution}}
 }
 
 
-Solution element returned from Two\-Dfold\-List.  
-
-
+Solution element returned from TwoDfoldList.  
 \subsection*{Data Fields}
 \begin{DoxyCompactItemize}
 \item 
-\hypertarget{structTwoDfold__solution_a298767110e07490d361bf7da920fd153}{int \hyperlink{structTwoDfold__solution_a298767110e07490d361bf7da920fd153}{k}}\label{structTwoDfold__solution_a298767110e07490d361bf7da920fd153}
+\hypertarget{structTwoDfold__solution_a298767110e07490d361bf7da920fd153}{
+int \hyperlink{structTwoDfold__solution_a298767110e07490d361bf7da920fd153}{k}}
+\label{structTwoDfold__solution_a298767110e07490d361bf7da920fd153}
 
-\begin{DoxyCompactList}\small\item\em Distance to first reference. \end{DoxyCompactList}\item 
-\hypertarget{structTwoDfold__solution_a64fb28259cf925c3bba7b8d14592363a}{int \hyperlink{structTwoDfold__solution_a64fb28259cf925c3bba7b8d14592363a}{l}}\label{structTwoDfold__solution_a64fb28259cf925c3bba7b8d14592363a}
+\begin{DoxyCompactList}\small\item\em Distance to first reference. \item\end{DoxyCompactList}\item 
+\hypertarget{structTwoDfold__solution_a64fb28259cf925c3bba7b8d14592363a}{
+int \hyperlink{structTwoDfold__solution_a64fb28259cf925c3bba7b8d14592363a}{l}}
+\label{structTwoDfold__solution_a64fb28259cf925c3bba7b8d14592363a}
 
-\begin{DoxyCompactList}\small\item\em Distance to second reference. \end{DoxyCompactList}\item 
-\hypertarget{structTwoDfold__solution_a3f65891d0c931f88440150bb32bcf753}{float \hyperlink{structTwoDfold__solution_a3f65891d0c931f88440150bb32bcf753}{en}}\label{structTwoDfold__solution_a3f65891d0c931f88440150bb32bcf753}
+\begin{DoxyCompactList}\small\item\em Distance to second reference. \item\end{DoxyCompactList}\item 
+\hypertarget{structTwoDfold__solution_a3f65891d0c931f88440150bb32bcf753}{
+float \hyperlink{structTwoDfold__solution_a3f65891d0c931f88440150bb32bcf753}{en}}
+\label{structTwoDfold__solution_a3f65891d0c931f88440150bb32bcf753}
 
-\begin{DoxyCompactList}\small\item\em Free energy in kcal/mol. \end{DoxyCompactList}\item 
-\hypertarget{structTwoDfold__solution_ac87e00bbdb13e0b6ef45c4f65608b416}{char $\ast$ \hyperlink{structTwoDfold__solution_ac87e00bbdb13e0b6ef45c4f65608b416}{s}}\label{structTwoDfold__solution_ac87e00bbdb13e0b6ef45c4f65608b416}
+\begin{DoxyCompactList}\small\item\em Free energy in kcal/mol. \item\end{DoxyCompactList}\item 
+\hypertarget{structTwoDfold__solution_ac87e00bbdb13e0b6ef45c4f65608b416}{
+char $\ast$ \hyperlink{structTwoDfold__solution_ac87e00bbdb13e0b6ef45c4f65608b416}{s}}
+\label{structTwoDfold__solution_ac87e00bbdb13e0b6ef45c4f65608b416}
 
-\begin{DoxyCompactList}\small\item\em M\-F\-E representative structure in dot-\/bracket notation. \end{DoxyCompactList}\end{DoxyCompactItemize}
+\begin{DoxyCompactList}\small\item\em MFE representative structure in dot-\/bracket notation. \item\end{DoxyCompactList}\end{DoxyCompactItemize}
 
 
 \subsection{Detailed Description}
-Solution element returned from Two\-Dfold\-List. 
-
-This element contains free energy and structure for the appropriate kappa (k), lambda (l) neighborhood The datastructure contains two integer attributes 'k' and 'l' as well as an attribute 'en' of type float representing the free energy in kcal/mol and an attribute 's' of type char$\ast$ containg the secondary structure representative,
+Solution element returned from TwoDfoldList. This element contains free energy and structure for the appropriate kappa (k), lambda (l) neighborhood The datastructure contains two integer attributes 'k' and 'l' as well as an attribute 'en' of type float representing the free energy in kcal/mol and an attribute 's' of type char$\ast$ containg the secondary structure representative,
 
-A value of \hyperlink{energy__const_8h_a12c2040f25d8e3a7b9e1c2024c618cb6}{I\-N\-F} in k denotes the end of a list
+A value of \hyperlink{energy__const_8h_a12c2040f25d8e3a7b9e1c2024c618cb6}{INF} in k denotes the end of a list
 
-\begin{DoxySeeAlso}{See Also}
-\hyperlink{group__kl__neighborhood__mfe_ga47da790166020558d27323aef489703e}{Two\-Dfold\-List()} 
+\begin{DoxySeeAlso}{See also}
+\hyperlink{group__kl__neighborhood__mfe_ga47da790166020558d27323aef489703e}{TwoDfoldList()} 
 \end{DoxySeeAlso}
 
 
-The documentation for this struct was generated from the following file\-:\begin{DoxyCompactItemize}
+The documentation for this struct was generated from the following file:\begin{DoxyCompactItemize}
 \item 
-/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/\hyperlink{data__structures_8h}{data\-\_\-structures.\-h}\end{DoxyCompactItemize}
+/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/\hyperlink{data__structures_8h}{data\_\-structures.h}\end{DoxyCompactItemize}