JWS-117 Compiled all tools with ./compilebin.sh and some were missing related files.

[jabaws.git] / binaries / src / ViennaRNA / doc / latex / structcofoldF.tex

diff --git a/binaries/src/ViennaRNA/doc/latex/structcofoldF.tex b/binaries/src/ViennaRNA/doc/latex/structcofoldF.tex
index bbf3451..586f544 100644 (file)
--- a/binaries/src/ViennaRNA/doc/latex/structcofoldF.tex
+++ b/binaries/src/ViennaRNA/doc/latex/structcofoldF.tex
@@ -1,26 +1,37 @@
-\hypertarget{structcofoldF}{\section{cofold\-F Struct Reference}
-\label{structcofoldF}\index{cofold\-F@{cofold\-F}}
+\hypertarget{structcofoldF}{
+\section{cofoldF Struct Reference}
+\label{structcofoldF}\index{cofoldF@{cofoldF}}
 }
 \subsection*{Data Fields}
 \begin{DoxyCompactItemize}
 \item 
-\hypertarget{structcofoldF_af6c496438321eb8bb907a21de1915c23}{double \hyperlink{structcofoldF_af6c496438321eb8bb907a21de1915c23}{F0\-A\-B}}\label{structcofoldF_af6c496438321eb8bb907a21de1915c23}
+\hypertarget{structcofoldF_af6c496438321eb8bb907a21de1915c23}{
+double \hyperlink{structcofoldF_af6c496438321eb8bb907a21de1915c23}{F0AB}}
+\label{structcofoldF_af6c496438321eb8bb907a21de1915c23}
 
-\begin{DoxyCompactList}\small\item\em Null model without Duplex\-Init. \end{DoxyCompactList}\item 
-\hypertarget{structcofoldF_a2ae1245ff4a93cd11f882f490f777cb7}{double \hyperlink{structcofoldF_a2ae1245ff4a93cd11f882f490f777cb7}{F\-A\-B}}\label{structcofoldF_a2ae1245ff4a93cd11f882f490f777cb7}
+\begin{DoxyCompactList}\small\item\em Null model without DuplexInit. \item\end{DoxyCompactList}\item 
+\hypertarget{structcofoldF_a2ae1245ff4a93cd11f882f490f777cb7}{
+double \hyperlink{structcofoldF_a2ae1245ff4a93cd11f882f490f777cb7}{FAB}}
+\label{structcofoldF_a2ae1245ff4a93cd11f882f490f777cb7}
 
-\begin{DoxyCompactList}\small\item\em all states with Duplex\-Init correction \end{DoxyCompactList}\item 
-\hypertarget{structcofoldF_a4899a4f9b42e416baf46c5fe10751c45}{double \hyperlink{structcofoldF_a4899a4f9b42e416baf46c5fe10751c45}{Fc\-A\-B}}\label{structcofoldF_a4899a4f9b42e416baf46c5fe10751c45}
+\begin{DoxyCompactList}\small\item\em all states with DuplexInit correction \item\end{DoxyCompactList}\item 
+\hypertarget{structcofoldF_a4899a4f9b42e416baf46c5fe10751c45}{
+double \hyperlink{structcofoldF_a4899a4f9b42e416baf46c5fe10751c45}{FcAB}}
+\label{structcofoldF_a4899a4f9b42e416baf46c5fe10751c45}
 
-\begin{DoxyCompactList}\small\item\em true hybrid states only \end{DoxyCompactList}\item 
-\hypertarget{structcofoldF_a460f3ba205c205e6f5ec27cc2e2eb2b2}{double \hyperlink{structcofoldF_a460f3ba205c205e6f5ec27cc2e2eb2b2}{F\-A}}\label{structcofoldF_a460f3ba205c205e6f5ec27cc2e2eb2b2}
+\begin{DoxyCompactList}\small\item\em true hybrid states only \item\end{DoxyCompactList}\item 
+\hypertarget{structcofoldF_a460f3ba205c205e6f5ec27cc2e2eb2b2}{
+double \hyperlink{structcofoldF_a460f3ba205c205e6f5ec27cc2e2eb2b2}{FA}}
+\label{structcofoldF_a460f3ba205c205e6f5ec27cc2e2eb2b2}
 
-\begin{DoxyCompactList}\small\item\em monomer A \end{DoxyCompactList}\item 
-\hypertarget{structcofoldF_ad3e5466724f3987be9d6f388b8ee5129}{double \hyperlink{structcofoldF_ad3e5466724f3987be9d6f388b8ee5129}{F\-B}}\label{structcofoldF_ad3e5466724f3987be9d6f388b8ee5129}
+\begin{DoxyCompactList}\small\item\em monomer A \item\end{DoxyCompactList}\item 
+\hypertarget{structcofoldF_ad3e5466724f3987be9d6f388b8ee5129}{
+double \hyperlink{structcofoldF_ad3e5466724f3987be9d6f388b8ee5129}{FB}}
+\label{structcofoldF_ad3e5466724f3987be9d6f388b8ee5129}
 
-\begin{DoxyCompactList}\small\item\em monomer B \end{DoxyCompactList}\end{DoxyCompactItemize}
+\begin{DoxyCompactList}\small\item\em monomer B \item\end{DoxyCompactList}\end{DoxyCompactItemize}
 
 
-The documentation for this struct was generated from the following file\-:\begin{DoxyCompactItemize}
+The documentation for this struct was generated from the following file:\begin{DoxyCompactItemize}
 \item 
-/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/\hyperlink{data__structures_8h}{data\-\_\-structures.\-h}\end{DoxyCompactItemize}
+/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/\hyperlink{data__structures_8h}{data\_\-structures.h}\end{DoxyCompactItemize}