Add missing doc files

[jabaws.git] / binaries / src / ViennaRNA / doc / latex / subopt_8h_source.tex

diff --git a/binaries/src/ViennaRNA/doc/latex/subopt_8h_source.tex b/binaries/src/ViennaRNA/doc/latex/subopt_8h_source.tex
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+\hypertarget{subopt_8h}{\section{subopt.\-h}
+\label{subopt_8h}\index{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/subopt.\-h@{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/subopt.\-h}}
+}
+
+\begin{DoxyCode}
+00001 \textcolor{comment}{/* subopt.h */}
+00002 \textcolor{preprocessor}{#ifndef \_\_VIENNA\_RNA\_PACKAGE\_SUBOPT\_H\_\_}
+00003 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define \_\_VIENNA\_RNA\_PACKAGE\_SUBOPT\_H\_\_}
+00004 \textcolor{preprocessor}{}
+00005 \textcolor{preprocessor}{#include "\hyperlink{data__structures_8h}{data\_structures.h}"}
+00006 
+00007 \textcolor{preprocessor}{#define MAXDOS 1000}
+00008 \textcolor{preprocessor}{}
+00043 \hyperlink{structSOLUTION}{SOLUTION} *\hyperlink{group__subopt__wuchty_ga700f662506a233e42dd7fda74fafd40e}{subopt} (\textcolor{keywordtype}{char} *seq,
+00044                   \textcolor{keywordtype}{char} *structure,
+00045                   \textcolor{keywordtype}{int} delta,
+00046                   FILE *fp);
+00047 
+00053 \hyperlink{structSOLUTION}{SOLUTION} *\hyperlink{group__subopt__wuchty_ga554dedfcdb249fdf151caade58666e4d}{subopt\_par}( \textcolor{keywordtype}{char} *seq,
+00054                       \textcolor{keywordtype}{char} *structure,
+00055                       \hyperlink{structparamT}{paramT} *parameters,
+00056                       \textcolor{keywordtype}{int} delta,
+00057                       \textcolor{keywordtype}{int} is\_constrained,
+00058                       \textcolor{keywordtype}{int} is\_circular,
+00059                       FILE *fp);
+00060 
+00075 \hyperlink{structSOLUTION}{SOLUTION} *\hyperlink{group__subopt__wuchty_ga8634516e4740e0b6c9a46d2bae940340}{subopt\_circ} ( \textcolor{keywordtype}{char} *seq,
+00076                         \textcolor{keywordtype}{char} *sequence,
+00077                         \textcolor{keywordtype}{int} delta,
+00078                         FILE *fp);
+00079 
+00086 \textcolor{keyword}{extern}  \textcolor{keywordtype}{int}     \hyperlink{group__subopt__wuchty_ga873cf8ed69e0437f8efa8b1fec854a0e}{subopt\_sorted};
+00087 
+00088 
+00095 \textcolor{keyword}{extern}  \textcolor{keywordtype}{double}  \hyperlink{group__subopt__wuchty_ga5e57d914bcb5feeecdf520e25313fcfe}{print\_energy};
+00096 
+00113 \textcolor{keyword}{extern}  \textcolor{keywordtype}{int}     \hyperlink{group__dos_ga937634a76b46a22530a74906f1957a9e}{density\_of\_states}[\hyperlink{data__structures_8h_a5ec740b80afb4906ba4311dbd8ddbd89}{MAXDOS}+1];
+00114  \textcolor{comment}{/* End of group dos */}
+00116 
+00117 \textcolor{preprocessor}{#endif}
+\end{DoxyCode}