********************************************************************/
/*
- * RCS $Id: pair_dist.h 193 2011-02-07 15:45:21Z andreas $
+ * RCS $Id: pair_dist.h 302 2016-06-13 13:35:50Z fabian $
*/
#include "symmatrix.h"
extern int
-PairDistances(symmatrix_t **distmat, mseq_t *mseq, const int pairdist_type,
- const int istart, const int iend,
- const int jstart, const int jend,
+PairDistances(symmatrix_t **distmat, mseq_t *mseq, const int pairdist_type, bool bPercID,
+ const int istart, const unsigned long int iend,
+ const int jstart, const unsigned long int jend,
char *fdist_in, char *fdist_out);
#endif