JWS-112 Bumping version of ClustalO (src, binaries and windows) to version 1.2.4.
[jabaws.git] / binaries / src / clustalo / src / hhalign / hhfunc.h
index be2cd9a..231c68b 100644 (file)
  ********************************************************************/
 
 /*
- *  RCS $Id: hhfunc.h 143 2010-10-14 13:11:14Z andreas $
+ *  RCS $Id: hhfunc.h 290 2013-09-20 15:18:12Z fabian $
  */
 
 
 int readHMMWrapper(hmm_light *rHMM_p,
                     char *pcHMM_input);
 void FreeHMMstruct(hmm_light *prHMM);
-int AlnToHMM2(hmm_light *rHMM_p,
+int AlnToHMM2(hmm_light *rHMM_p, hhalign_para rHhalignPara, 
               char **ppcSeq, int iN);
 int HHMake_Wrapper(char *tmp_aln, char *hmm_out);