--- /dev/null
+This file contains any messages produced by compilers while
+running configure, to aid debugging if configure makes a mistake.
+
+It was created by clustalw configure 2.1, which was
+generated by GNU Autoconf 2.65. Invocation command line was
+
+ $ ./configure
+
+## --------- ##
+## Platform. ##
+## --------- ##
+
+hostname = ningal.cluster.lifesci.dundee.ac.uk
+uname -m = x86_64
+uname -r = 2.6.32-642.6.1.el6.x86_64
+uname -s = Linux
+uname -v = #1 SMP Wed Oct 5 00:36:12 UTC 2016
+
+/usr/bin/uname -p = unknown
+/bin/uname -X = unknown
+
+/bin/arch = x86_64
+/usr/bin/arch -k = unknown
+/usr/convex/getsysinfo = unknown
+/usr/bin/hostinfo = unknown
+/bin/machine = unknown
+/usr/bin/oslevel = unknown
+/bin/universe = unknown
+
+PATH: /gridware/sge/bin/lx-amd64
+PATH: /homes/fmmarquesmadeira/.local/anaconda/envs/python3/bin
+PATH: /gridware/sge/bin/lx-amd64
+PATH: /usr/lib64/qt-3.3/bin
+PATH: /usr/local/bin
+PATH: /bin
+PATH: /usr/bin
+PATH: /usr/local/sbin
+PATH: /usr/sbin
+PATH: /sbin
+PATH: /opt/dell/srvadmin/bin
+PATH: /homes/fmmarquesmadeira/.local/anaconda/bin
+PATH: /homes/fmmarquesmadeira/.local/bin/stamp4.4.2/bin/linux
+PATH: /homes/fmmarquesmadeira/.local/bin/mustang3.2.2/bin
+PATH: /homes/fmmarquesmadeira/.local/bin/mafft7.273/bin
+PATH: /homes/fmmarquesmadeira/.local/bin/foldx_Linux/bin
+PATH: /homes/fmmarquesmadeira/NOBACK/lib/oxbench_1_3//bin
+PATH: /homes/fmmarquesmadeira/.local/bin/Intellij/bin
+
+
+## ----------- ##
+## Core tests. ##
+## ----------- ##
+
+configure:2211: checking build system type
+configure:2225: result: x86_64-unknown-linux-gnu
+configure:2245: checking host system type
+configure:2258: result: x86_64-unknown-linux-gnu
+configure:2278: checking target system type
+configure:2291: result: x86_64-unknown-linux-gnu
+configure:2377: checking for a BSD-compatible install
+configure:2445: result: /usr/bin/install -c
+configure:2456: checking whether build environment is sane
+configure:2506: result: yes
+configure:2647: checking for a thread-safe mkdir -p
+configure:2686: result: /bin/mkdir -p
+configure:2699: checking for gawk
+configure:2715: found /bin/gawk
+configure:2726: result: gawk
+configure:2737: checking whether make sets $(MAKE)
+configure:2759: result: yes
+configure:2840: checking whether make sets $(MAKE)
+configure:2862: result: yes
+configure:2922: checking for gcc
+configure:2938: found /usr/bin/gcc
+configure:2949: result: gcc
+configure:3178: checking for C compiler version
+configure:3187: gcc --version >&5
+gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-17)
+Copyright (C) 2010 Free Software Foundation, Inc.
+This is free software; see the source for copying conditions. There is NO
+warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+
+configure:3198: $? = 0
+configure:3187: gcc -v >&5
+Using built-in specs.
+Target: x86_64-redhat-linux
+Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
+Thread model: posix
+gcc version 4.4.7 20120313 (Red Hat 4.4.7-17) (GCC)
+configure:3198: $? = 0
+configure:3187: gcc -V >&5
+gcc: '-V' option must have argument
+configure:3198: $? = 1
+configure:3187: gcc -qversion >&5
+gcc: unrecognized option '-qversion'
+gcc: no input files
+configure:3198: $? = 1
+configure:3218: checking whether the C compiler works
+configure:3240: gcc conftest.c >&5
+configure:3244: $? = 0
+configure:3293: result: yes
+configure:3296: checking for C compiler default output file name
+configure:3298: result: a.out
+configure:3304: checking for suffix of executables
+configure:3311: gcc -o conftest conftest.c >&5
+configure:3315: $? = 0
+configure:3337: result:
+configure:3359: checking whether we are cross compiling
+configure:3367: gcc -o conftest conftest.c >&5
+configure:3371: $? = 0
+configure:3378: ./conftest
+configure:3382: $? = 0
+configure:3397: result: no
+configure:3402: checking for suffix of object files
+configure:3424: gcc -c conftest.c >&5
+configure:3428: $? = 0
+configure:3449: result: o
+configure:3453: checking whether we are using the GNU C compiler
+configure:3472: gcc -c conftest.c >&5
+configure:3472: $? = 0
+configure:3481: result: yes
+configure:3490: checking whether gcc accepts -g
+configure:3510: gcc -c -g conftest.c >&5
+configure:3510: $? = 0
+configure:3551: result: yes
+configure:3568: checking for gcc option to accept ISO C89
+configure:3632: gcc -c -g -O2 conftest.c >&5
+configure:3632: $? = 0
+configure:3645: result: none needed
+configure:3676: checking for style of include used by make
+configure:3704: result: GNU
+configure:3729: checking dependency style of gcc
+configure:3839: result: gcc3
+configure:3912: checking for g++
+configure:3928: found /usr/bin/g++
+configure:3939: result: g++
+configure:3966: checking for C++ compiler version
+configure:3975: g++ --version >&5
+g++ (GCC) 4.4.7 20120313 (Red Hat 4.4.7-17)
+Copyright (C) 2010 Free Software Foundation, Inc.
+This is free software; see the source for copying conditions. There is NO
+warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+
+configure:3986: $? = 0
+configure:3975: g++ -v >&5
+Using built-in specs.
+Target: x86_64-redhat-linux
+Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
+Thread model: posix
+gcc version 4.4.7 20120313 (Red Hat 4.4.7-17) (GCC)
+configure:3986: $? = 0
+configure:3975: g++ -V >&5
+g++: '-V' option must have argument
+configure:3986: $? = 1
+configure:3975: g++ -qversion >&5
+g++: unrecognized option '-qversion'
+g++: no input files
+configure:3986: $? = 1
+configure:3990: checking whether we are using the GNU C++ compiler
+configure:4009: g++ -c conftest.cpp >&5
+configure:4009: $? = 0
+configure:4018: result: yes
+configure:4027: checking whether g++ accepts -g
+configure:4047: g++ -c -g conftest.cpp >&5
+configure:4047: $? = 0
+configure:4088: result: yes
+configure:4113: checking dependency style of g++
+configure:4223: result: gcc3
+configure:4284: checking for ranlib
+configure:4300: found /usr/bin/ranlib
+configure:4311: result: ranlib
+configure:4353: checking how to run the C++ preprocessor
+configure:4380: g++ -E conftest.cpp
+configure:4380: $? = 0
+configure:4394: g++ -E conftest.cpp
+conftest.cpp:12:28: error: ac_nonexistent.h: No such file or directory
+configure:4394: $? = 1
+configure: failed program was:
+| /* confdefs.h */
+| #define PACKAGE_NAME "clustalw"
+| #define PACKAGE_TARNAME "clustalw"
+| #define PACKAGE_VERSION "2.1"
+| #define PACKAGE_STRING "clustalw 2.1"
+| #define PACKAGE_BUGREPORT "clustalw@ucd.ie"
+| #define PACKAGE_URL ""
+| #define OS_UNIX 1
+| #define PACKAGE "clustalw"
+| #define VERSION "2.1"
+| /* end confdefs.h. */
+| #include <ac_nonexistent.h>
+configure:4419: result: g++ -E
+configure:4439: g++ -E conftest.cpp
+configure:4439: $? = 0
+configure:4453: g++ -E conftest.cpp
+conftest.cpp:12:28: error: ac_nonexistent.h: No such file or directory
+configure:4453: $? = 1
+configure: failed program was:
+| /* confdefs.h */
+| #define PACKAGE_NAME "clustalw"
+| #define PACKAGE_TARNAME "clustalw"
+| #define PACKAGE_VERSION "2.1"
+| #define PACKAGE_STRING "clustalw 2.1"
+| #define PACKAGE_BUGREPORT "clustalw@ucd.ie"
+| #define PACKAGE_URL ""
+| #define OS_UNIX 1
+| #define PACKAGE "clustalw"
+| #define VERSION "2.1"
+| /* end confdefs.h. */
+| #include <ac_nonexistent.h>
+configure:4482: checking for grep that handles long lines and -e
+configure:4540: result: /bin/grep
+configure:4545: checking for egrep
+configure:4607: result: /bin/grep -E
+configure:4612: checking for ANSI C header files
+configure:4632: g++ -c -g -O2 conftest.cpp >&5
+configure:4632: $? = 0
+configure:4705: g++ -o conftest -g -O2 conftest.cpp >&5
+configure:4705: $? = 0
+configure:4705: ./conftest
+configure:4705: $? = 0
+configure:4716: result: yes
+configure:4732: checking for sys/types.h
+configure:4732: g++ -c -g -O2 conftest.cpp >&5
+configure:4732: $? = 0
+configure:4732: result: yes
+configure:4732: checking for sys/stat.h
+configure:4732: g++ -c -g -O2 conftest.cpp >&5
+configure:4732: $? = 0
+configure:4732: result: yes
+configure:4732: checking for stdlib.h
+configure:4732: g++ -c -g -O2 conftest.cpp >&5
+configure:4732: $? = 0
+configure:4732: result: yes
+configure:4732: checking for string.h
+configure:4732: g++ -c -g -O2 conftest.cpp >&5
+configure:4732: $? = 0
+configure:4732: result: yes
+configure:4732: checking for memory.h
+configure:4732: g++ -c -g -O2 conftest.cpp >&5
+configure:4732: $? = 0
+configure:4732: result: yes
+configure:4732: checking for strings.h
+configure:4732: g++ -c -g -O2 conftest.cpp >&5
+configure:4732: $? = 0
+configure:4732: result: yes
+configure:4732: checking for inttypes.h
+configure:4732: g++ -c -g -O2 conftest.cpp >&5
+configure:4732: $? = 0
+configure:4732: result: yes
+configure:4732: checking for stdint.h
+configure:4732: g++ -c -g -O2 conftest.cpp >&5
+configure:4732: $? = 0
+configure:4732: result: yes
+configure:4732: checking for unistd.h
+configure:4732: g++ -c -g -O2 conftest.cpp >&5
+configure:4732: $? = 0
+configure:4732: result: yes
+configure:4745: checking for stdbool.h that conforms to C99
+configure:4830: g++ -c -g -O2 conftest.cpp >&5
+configure:4830: $? = 0
+configure:4837: result: yes
+configure:4839: checking for _Bool
+configure:4839: g++ -c -g -O2 conftest.cpp >&5
+conftest.cpp: In function 'int main()':
+conftest.cpp:58: error: '_Bool' was not declared in this scope
+configure:4839: $? = 1
+configure: failed program was:
+| /* confdefs.h */
+| #define PACKAGE_NAME "clustalw"
+| #define PACKAGE_TARNAME "clustalw"
+| #define PACKAGE_VERSION "2.1"
+| #define PACKAGE_STRING "clustalw 2.1"
+| #define PACKAGE_BUGREPORT "clustalw@ucd.ie"
+| #define PACKAGE_URL ""
+| #define OS_UNIX 1
+| #define PACKAGE "clustalw"
+| #define VERSION "2.1"
+| #define STDC_HEADERS 1
+| #define HAVE_SYS_TYPES_H 1
+| #define HAVE_SYS_STAT_H 1
+| #define HAVE_STDLIB_H 1
+| #define HAVE_STRING_H 1
+| #define HAVE_MEMORY_H 1
+| #define HAVE_STRINGS_H 1
+| #define HAVE_INTTYPES_H 1
+| #define HAVE_STDINT_H 1
+| #define HAVE_UNISTD_H 1
+| /* end confdefs.h. */
+| #include <stdio.h>
+| #ifdef HAVE_SYS_TYPES_H
+| # include <sys/types.h>
+| #endif
+| #ifdef HAVE_SYS_STAT_H
+| # include <sys/stat.h>
+| #endif
+| #ifdef STDC_HEADERS
+| # include <stdlib.h>
+| # include <stddef.h>
+| #else
+| # ifdef HAVE_STDLIB_H
+| # include <stdlib.h>
+| # endif
+| #endif
+| #ifdef HAVE_STRING_H
+| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
+| # include <memory.h>
+| # endif
+| # include <string.h>
+| #endif
+| #ifdef HAVE_STRINGS_H
+| # include <strings.h>
+| #endif
+| #ifdef HAVE_INTTYPES_H
+| # include <inttypes.h>
+| #endif
+| #ifdef HAVE_STDINT_H
+| # include <stdint.h>
+| #endif
+| #ifdef HAVE_UNISTD_H
+| # include <unistd.h>
+| #endif
+| int
+| main ()
+| {
+| if (sizeof (_Bool))
+| return 0;
+| ;
+| return 0;
+| }
+configure:4839: result: no
+configure:4855: checking for an ANSI C-conforming const
+configure:4920: g++ -c -g -O2 conftest.cpp >&5
+configure:4920: $? = 0
+configure:4927: result: yes
+configure:4935: checking for size_t
+configure:4935: g++ -c -g -O2 conftest.cpp >&5
+configure:4935: $? = 0
+configure:4935: g++ -c -g -O2 conftest.cpp >&5
+conftest.cpp: In function 'int main()':
+conftest.cpp:59: error: expected primary-expression before ')' token
+configure:4935: $? = 1
+configure: failed program was:
+| /* confdefs.h */
+| #define PACKAGE_NAME "clustalw"
+| #define PACKAGE_TARNAME "clustalw"
+| #define PACKAGE_VERSION "2.1"
+| #define PACKAGE_STRING "clustalw 2.1"
+| #define PACKAGE_BUGREPORT "clustalw@ucd.ie"
+| #define PACKAGE_URL ""
+| #define OS_UNIX 1
+| #define PACKAGE "clustalw"
+| #define VERSION "2.1"
+| #define STDC_HEADERS 1
+| #define HAVE_SYS_TYPES_H 1
+| #define HAVE_SYS_STAT_H 1
+| #define HAVE_STDLIB_H 1
+| #define HAVE_STRING_H 1
+| #define HAVE_MEMORY_H 1
+| #define HAVE_STRINGS_H 1
+| #define HAVE_INTTYPES_H 1
+| #define HAVE_STDINT_H 1
+| #define HAVE_UNISTD_H 1
+| #define HAVE_STDBOOL_H 1
+| /* end confdefs.h. */
+| #include <stdio.h>
+| #ifdef HAVE_SYS_TYPES_H
+| # include <sys/types.h>
+| #endif
+| #ifdef HAVE_SYS_STAT_H
+| # include <sys/stat.h>
+| #endif
+| #ifdef STDC_HEADERS
+| # include <stdlib.h>
+| # include <stddef.h>
+| #else
+| # ifdef HAVE_STDLIB_H
+| # include <stdlib.h>
+| # endif
+| #endif
+| #ifdef HAVE_STRING_H
+| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
+| # include <memory.h>
+| # endif
+| # include <string.h>
+| #endif
+| #ifdef HAVE_STRINGS_H
+| # include <strings.h>
+| #endif
+| #ifdef HAVE_INTTYPES_H
+| # include <inttypes.h>
+| #endif
+| #ifdef HAVE_STDINT_H
+| # include <stdint.h>
+| #endif
+| #ifdef HAVE_UNISTD_H
+| # include <unistd.h>
+| #endif
+| int
+| main ()
+| {
+| if (sizeof ((size_t)))
+| return 0;
+| ;
+| return 0;
+| }
+configure:4935: result: yes
+configure:4961: checking for stdlib.h
+configure:4961: result: yes
+configure:4971: checking for GNU libc compatible malloc
+configure:4995: g++ -o conftest -g -O2 conftest.cpp >&5
+configure:4995: $? = 0
+configure:4995: ./conftest
+configure:4995: $? = 0
+configure:5005: result: yes
+configure:5229: creating ./config.status
+
+## ---------------------- ##
+## Running config.status. ##
+## ---------------------- ##
+
+This file was extended by clustalw config.status 2.1, which was
+generated by GNU Autoconf 2.65. Invocation command line was
+
+ CONFIG_FILES =
+ CONFIG_HEADERS =
+ CONFIG_LINKS =
+ CONFIG_COMMANDS =
+ $ ./config.status
+
+on ningal.cluster.lifesci.dundee.ac.uk
+
+config.status:878: creating Makefile
+config.status:878: creating m4/Makefile
+config.status:878: creating src/Makefile
+config.status:878: creating src/clustalw_version.h
+config.status:878: creating src/config.h
+config.status:1050: src/config.h is unchanged
+config.status:1098: executing depfiles commands
+
+## ---------------- ##
+## Cache variables. ##
+## ---------------- ##
+
+ac_cv_build=x86_64-unknown-linux-gnu
+ac_cv_c_compiler_gnu=yes
+ac_cv_c_const=yes
+ac_cv_cxx_compiler_gnu=yes
+ac_cv_env_CCC_set=
+ac_cv_env_CCC_value=
+ac_cv_env_CC_set=
+ac_cv_env_CC_value=
+ac_cv_env_CFLAGS_set=
+ac_cv_env_CFLAGS_value=
+ac_cv_env_CPPFLAGS_set=
+ac_cv_env_CPPFLAGS_value=
+ac_cv_env_CXXCPP_set=
+ac_cv_env_CXXCPP_value=
+ac_cv_env_CXXFLAGS_set=
+ac_cv_env_CXXFLAGS_value=
+ac_cv_env_CXX_set=
+ac_cv_env_CXX_value=
+ac_cv_env_LDFLAGS_set=
+ac_cv_env_LDFLAGS_value=
+ac_cv_env_LIBS_set=
+ac_cv_env_LIBS_value=
+ac_cv_env_build_alias_set=
+ac_cv_env_build_alias_value=
+ac_cv_env_host_alias_set=
+ac_cv_env_host_alias_value=
+ac_cv_env_target_alias_set=
+ac_cv_env_target_alias_value=
+ac_cv_func_malloc_0_nonnull=yes
+ac_cv_header_inttypes_h=yes
+ac_cv_header_memory_h=yes
+ac_cv_header_stdbool_h=yes
+ac_cv_header_stdc=yes
+ac_cv_header_stdint_h=yes
+ac_cv_header_stdlib_h=yes
+ac_cv_header_string_h=yes
+ac_cv_header_strings_h=yes
+ac_cv_header_sys_stat_h=yes
+ac_cv_header_sys_types_h=yes
+ac_cv_header_unistd_h=yes
+ac_cv_host=x86_64-unknown-linux-gnu
+ac_cv_objext=o
+ac_cv_path_EGREP='/bin/grep -E'
+ac_cv_path_GREP=/bin/grep
+ac_cv_path_install='/usr/bin/install -c'
+ac_cv_path_mkdir=/bin/mkdir
+ac_cv_prog_AWK=gawk
+ac_cv_prog_CXXCPP='g++ -E'
+ac_cv_prog_ac_ct_CC=gcc
+ac_cv_prog_ac_ct_CXX=g++
+ac_cv_prog_ac_ct_RANLIB=ranlib
+ac_cv_prog_cc_c89=
+ac_cv_prog_cc_g=yes
+ac_cv_prog_cxx_g=yes
+ac_cv_prog_make_make_set=yes
+ac_cv_target=x86_64-unknown-linux-gnu
+ac_cv_type__Bool=no
+ac_cv_type_size_t=yes
+am_cv_CC_dependencies_compiler_type=gcc3
+am_cv_CXX_dependencies_compiler_type=gcc3
+
+## ----------------- ##
+## Output variables. ##
+## ----------------- ##
+
+ACLOCAL='${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run aclocal-1.11'
+AMDEPBACKSLASH='\'
+AMDEP_FALSE='#'
+AMDEP_TRUE=''
+AMTAR='${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run tar'
+AUTOCONF='${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run autoconf'
+AUTOHEADER='${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run autoheader'
+AUTOMAKE='${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run automake-1.11'
+AWK='gawk'
+CC='gcc'
+CCDEPMODE='depmode=gcc3'
+CFLAGS='-g -O2'
+CLUSTALW_NAME='ClustalW'
+CLUSTALW_VERSION='2.1'
+CPPFLAGS=''
+CXX='g++'
+CXXCPP='g++ -E'
+CXXDEPMODE='depmode=gcc3'
+CXXFLAGS='-g -O2'
+CYGPATH_W='echo'
+DEFS='-DHAVE_CONFIG_H'
+DEPDIR='.deps'
+ECHO_C=''
+ECHO_N='-n'
+ECHO_T=''
+EGREP='/bin/grep -E'
+EXEEXT=''
+GREP='/bin/grep'
+INSTALL_DATA='${INSTALL} -m 644'
+INSTALL_PROGRAM='${INSTALL}'
+INSTALL_SCRIPT='${INSTALL}'
+INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
+LDFLAGS=''
+LIBOBJS=''
+LIBS=''
+LTLIBOBJS=''
+MAKEINFO='${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run makeinfo'
+MKDIR_P='/bin/mkdir -p'
+OBJEXT='o'
+PACKAGE='clustalw'
+PACKAGE_BUGREPORT='clustalw@ucd.ie'
+PACKAGE_NAME='clustalw'
+PACKAGE_STRING='clustalw 2.1'
+PACKAGE_TARNAME='clustalw'
+PACKAGE_URL=''
+PACKAGE_VERSION='2.1'
+PATH_SEPARATOR=':'
+RANLIB='ranlib'
+SET_MAKE=''
+SHELL='/bin/sh'
+STRIP=''
+VERSION='2.1'
+ac_ct_CC='gcc'
+ac_ct_CXX='g++'
+am__EXEEXT_FALSE=''
+am__EXEEXT_TRUE='#'
+am__fastdepCC_FALSE='#'
+am__fastdepCC_TRUE=''
+am__fastdepCXX_FALSE='#'
+am__fastdepCXX_TRUE=''
+am__include='include'
+am__isrc=''
+am__leading_dot='.'
+am__quote=''
+am__tar='${AMTAR} chof - "$$tardir"'
+am__untar='${AMTAR} xf -'
+bindir='${exec_prefix}/bin'
+build='x86_64-unknown-linux-gnu'
+build_alias=''
+build_cpu='x86_64'
+build_os='linux-gnu'
+build_vendor='unknown'
+datadir='${datarootdir}'
+datarootdir='${prefix}/share'
+docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
+dvidir='${docdir}'
+exec_prefix='${prefix}'
+host='x86_64-unknown-linux-gnu'
+host_alias=''
+host_cpu='x86_64'
+host_os='linux-gnu'
+host_vendor='unknown'
+htmldir='${docdir}'
+includedir='${prefix}/include'
+infodir='${datarootdir}/info'
+install_sh='${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/install-sh'
+libdir='${exec_prefix}/lib'
+libexecdir='${exec_prefix}/libexec'
+localedir='${datarootdir}/locale'
+localstatedir='${prefix}/var'
+mandir='${datarootdir}/man'
+mkdir_p='/bin/mkdir -p'
+oldincludedir='/usr/include'
+pdfdir='${docdir}'
+prefix='/usr/local'
+program_transform_name='s,x,x,'
+psdir='${docdir}'
+sbindir='${exec_prefix}/sbin'
+sharedstatedir='${prefix}/com'
+sysconfdir='${prefix}/etc'
+target='x86_64-unknown-linux-gnu'
+target_alias=''
+target_cpu='x86_64'
+target_os='linux-gnu'
+target_vendor='unknown'
+
+## ----------- ##
+## confdefs.h. ##
+## ----------- ##
+
+/* confdefs.h */
+#define PACKAGE_NAME "clustalw"
+#define PACKAGE_TARNAME "clustalw"
+#define PACKAGE_VERSION "2.1"
+#define PACKAGE_STRING "clustalw 2.1"
+#define PACKAGE_BUGREPORT "clustalw@ucd.ie"
+#define PACKAGE_URL ""
+#define OS_UNIX 1
+#define PACKAGE "clustalw"
+#define VERSION "2.1"
+#define STDC_HEADERS 1
+#define HAVE_SYS_TYPES_H 1
+#define HAVE_SYS_STAT_H 1
+#define HAVE_STDLIB_H 1
+#define HAVE_STRING_H 1
+#define HAVE_MEMORY_H 1
+#define HAVE_STRINGS_H 1
+#define HAVE_INTTYPES_H 1
+#define HAVE_STDINT_H 1
+#define HAVE_UNISTD_H 1
+#define HAVE_STDBOOL_H 1
+#define HAVE_STDLIB_H 1
+#define HAVE_MALLOC 1
+
+configure: exit 0
git://source.jalview.org / jabaws.git / blobdiff