debug=false
ac_cs_recheck=false
ac_cs_silent=false
+
SHELL=${CONFIG_SHELL-/bin/sh}
-## --------------------- ##
-## M4sh Initialization. ##
-## --------------------- ##
+export SHELL
+## -------------------- ##
+## M4sh Initialization. ##
+## -------------------- ##
# Be more Bourne compatible
DUALCASE=1; export DUALCASE # for MKS sh
-if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
+if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
emulate sh
NULLCMD=:
# Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
alias -g '${1+"$@"}'='"$@"'
setopt NO_GLOB_SUBST
else
- case `(set -o) 2>/dev/null` in
- *posix*) set -o posix ;;
+ case `(set -o) 2>/dev/null` in #(
+ *posix*) :
+ set -o posix ;; #(
+ *) :
+ ;;
esac
-
fi
-
-
-# PATH needs CR
-# Avoid depending upon Character Ranges.
-as_cr_letters='abcdefghijklmnopqrstuvwxyz'
-as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
-as_cr_Letters=$as_cr_letters$as_cr_LETTERS
-as_cr_digits='0123456789'
-as_cr_alnum=$as_cr_Letters$as_cr_digits
-
as_nl='
'
export as_nl
as_echo='\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'
as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo
as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo$as_echo
-if (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
+# Prefer a ksh shell builtin over an external printf program on Solaris,
+# but without wasting forks for bash or zsh.
+if test -z "$BASH_VERSION$ZSH_VERSION" \
+ && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
+ as_echo='print -r --'
+ as_echo_n='print -rn --'
+elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
as_echo='printf %s\n'
as_echo_n='printf %s'
else
as_echo_body='eval expr "X$1" : "X\\(.*\\)"'
as_echo_n_body='eval
arg=$1;
- case $arg in
+ case $arg in #(
*"$as_nl"*)
expr "X$arg" : "X\\(.*\\)$as_nl";
arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
}
fi
-# Support unset when possible.
-if ( (MAIL=60; unset MAIL) || exit) >/dev/null 2>&1; then
- as_unset=unset
-else
- as_unset=false
-fi
-
# IFS
# We need space, tab and new line, in precisely that order. Quoting is
IFS=" "" $as_nl"
# Find who we are. Look in the path if we contain no directory separator.
-case $0 in
+case $0 in #((
*[\\/]* ) as_myself=$0 ;;
*) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
for as_dir in $PATH
do
IFS=$as_save_IFS
test -z "$as_dir" && as_dir=.
- test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
-done
+ test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
+ done
IFS=$as_save_IFS
;;
fi
if test ! -f "$as_myself"; then
$as_echo "$as_myself: error: cannot find myself; rerun with an absolute file name" >&2
- { (exit 1); exit 1; }
+ exit 1
fi
-# Work around bugs in pre-3.0 UWIN ksh.
-for as_var in ENV MAIL MAILPATH
-do ($as_unset $as_var) >/dev/null 2>&1 && $as_unset $as_var
+# Unset variables that we do not need and which cause bugs (e.g. in
+# pre-3.0 UWIN ksh). But do not cause bugs in bash 2.01; the "|| exit 1"
+# suppresses any "Segmentation fault" message there. '((' could
+# trigger a bug in pdksh 5.2.14.
+for as_var in BASH_ENV ENV MAIL MAILPATH
+do eval test x\${$as_var+set} = xset \
+ && ( (unset $as_var) || exit 1) >/dev/null 2>&1 && unset $as_var || :
done
PS1='$ '
PS2='> '
LANGUAGE=C
export LANGUAGE
-# Required to use basename.
+# CDPATH.
+(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
+
+
+# as_fn_error ERROR [LINENO LOG_FD]
+# ---------------------------------
+# Output "`basename $0`: error: ERROR" to stderr. If LINENO and LOG_FD are
+# provided, also output the error to LOG_FD, referencing LINENO. Then exit the
+# script with status $?, using 1 if that was 0.
+as_fn_error ()
+{
+ as_status=$?; test $as_status -eq 0 && as_status=1
+ if test "$3"; then
+ as_lineno=${as_lineno-"$2"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ $as_echo "$as_me:${as_lineno-$LINENO}: error: $1" >&$3
+ fi
+ $as_echo "$as_me: error: $1" >&2
+ as_fn_exit $as_status
+} # as_fn_error
+
+
+# as_fn_set_status STATUS
+# -----------------------
+# Set $? to STATUS, without forking.
+as_fn_set_status ()
+{
+ return $1
+} # as_fn_set_status
+
+# as_fn_exit STATUS
+# -----------------
+# Exit the shell with STATUS, even in a "trap 0" or "set -e" context.
+as_fn_exit ()
+{
+ set +e
+ as_fn_set_status $1
+ exit $1
+} # as_fn_exit
+
+# as_fn_unset VAR
+# ---------------
+# Portably unset VAR.
+as_fn_unset ()
+{
+ { eval $1=; unset $1;}
+}
+as_unset=as_fn_unset
+# as_fn_append VAR VALUE
+# ----------------------
+# Append the text in VALUE to the end of the definition contained in VAR. Take
+# advantage of any shell optimizations that allow amortized linear growth over
+# repeated appends, instead of the typical quadratic growth present in naive
+# implementations.
+if (eval "as_var=1; as_var+=2; test x\$as_var = x12") 2>/dev/null; then :
+ eval 'as_fn_append ()
+ {
+ eval $1+=\$2
+ }'
+else
+ as_fn_append ()
+ {
+ eval $1=\$$1\$2
+ }
+fi # as_fn_append
+
+# as_fn_arith ARG...
+# ------------------
+# Perform arithmetic evaluation on the ARGs, and store the result in the
+# global $as_val. Take advantage of shells that can avoid forks. The arguments
+# must be portable across $(()) and expr.
+if (eval "test \$(( 1 + 1 )) = 2") 2>/dev/null; then :
+ eval 'as_fn_arith ()
+ {
+ as_val=$(( $* ))
+ }'
+else
+ as_fn_arith ()
+ {
+ as_val=`expr "$@" || test $? -eq 1`
+ }
+fi # as_fn_arith
+
+
if expr a : '\(a\)' >/dev/null 2>&1 &&
test "X`expr 00001 : '.*\(...\)'`" = X001; then
as_expr=expr
as_basename=false
fi
+if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
+ as_dirname=dirname
+else
+ as_dirname=false
+fi
-# Name of the executable.
as_me=`$as_basename -- "$0" ||
$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
X"$0" : 'X\(//\)$' \| \
}
s/.*/./; q'`
-# CDPATH.
-$as_unset CDPATH
-
-
-
- as_lineno_1=$LINENO
- as_lineno_2=$LINENO
- test "x$as_lineno_1" != "x$as_lineno_2" &&
- test "x`expr $as_lineno_1 + 1`" = "x$as_lineno_2" || {
-
- # Create $as_me.lineno as a copy of $as_myself, but with $LINENO
- # uniformly replaced by the line number. The first 'sed' inserts a
- # line-number line after each line using $LINENO; the second 'sed'
- # does the real work. The second script uses 'N' to pair each
- # line-number line with the line containing $LINENO, and appends
- # trailing '-' during substitution so that $LINENO is not a special
- # case at line end.
- # (Raja R Harinath suggested sed '=', and Paul Eggert wrote the
- # scripts with optimization help from Paolo Bonzini. Blame Lee
- # E. McMahon (1931-1989) for sed's syntax. :-)
- sed -n '
- p
- /[$]LINENO/=
- ' <$as_myself |
- sed '
- s/[$]LINENO.*/&-/
- t lineno
- b
- :lineno
- N
- :loop
- s/[$]LINENO\([^'$as_cr_alnum'_].*\n\)\(.*\)/\2\1\2/
- t loop
- s/-\n.*//
- ' >$as_me.lineno &&
- chmod +x "$as_me.lineno" ||
- { $as_echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2
- { (exit 1); exit 1; }; }
-
- # Don't try to exec as it changes $[0], causing all sort of problems
- # (the dirname of $[0] is not the place where we might find the
- # original and so on. Autoconf is especially sensitive to this).
- . "./$as_me.lineno"
- # Exit status is that of the last command.
- exit
-}
-
-
-if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
- as_dirname=dirname
-else
- as_dirname=false
-fi
+# Avoid depending upon Character Ranges.
+as_cr_letters='abcdefghijklmnopqrstuvwxyz'
+as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
+as_cr_Letters=$as_cr_letters$as_cr_LETTERS
+as_cr_digits='0123456789'
+as_cr_alnum=$as_cr_Letters$as_cr_digits
ECHO_C= ECHO_N= ECHO_T=
-case `echo -n x` in
+case `echo -n x` in #(((((
-n*)
- case `echo 'x\c'` in
+ case `echo 'xy\c'` in
*c*) ECHO_T=' ';; # ECHO_T is single tab character.
- *) ECHO_C='\c';;
+ xy) ECHO_C='\c';;
+ *) echo `echo ksh88 bug on AIX 6.1` > /dev/null
+ ECHO_T=' ';;
esac;;
*)
ECHO_N='-n';;
esac
-if expr a : '\(a\)' >/dev/null 2>&1 &&
- test "X`expr 00001 : '.*\(...\)'`" = X001; then
- as_expr=expr
-else
- as_expr=false
-fi
rm -f conf$$ conf$$.exe conf$$.file
if test -d conf$$.dir; then
rm -f conf$$ conf$$.exe conf$$.dir/conf$$.file conf$$.file
rmdir conf$$.dir 2>/dev/null
+
+# as_fn_mkdir_p
+# -------------
+# Create "$as_dir" as a directory, including parents if necessary.
+as_fn_mkdir_p ()
+{
+
+ case $as_dir in #(
+ -*) as_dir=./$as_dir;;
+ esac
+ test -d "$as_dir" || eval $as_mkdir_p || {
+ as_dirs=
+ while :; do
+ case $as_dir in #(
+ *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
+ *) as_qdir=$as_dir;;
+ esac
+ as_dirs="'$as_qdir' $as_dirs"
+ as_dir=`$as_dirname -- "$as_dir" ||
+$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
+ X"$as_dir" : 'X\(//\)[^/]' \| \
+ X"$as_dir" : 'X\(//\)$' \| \
+ X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
+$as_echo X"$as_dir" |
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)[^/].*/{
+ s//\1/
+ q
+ }
+ /^X\(\/\/\)$/{
+ s//\1/
+ q
+ }
+ /^X\(\/\).*/{
+ s//\1/
+ q
+ }
+ s/.*/./; q'`
+ test -d "$as_dir" && break
+ done
+ test -z "$as_dirs" || eval "mkdir $as_dirs"
+ } || test -d "$as_dir" || as_fn_error "cannot create directory $as_dir"
+
+
+} # as_fn_mkdir_p
if mkdir -p . 2>/dev/null; then
- as_mkdir_p=:
+ as_mkdir_p='mkdir -p "$as_dir"'
else
test -d ./-p && rmdir ./-p
as_mkdir_p=false
if test -d "$1"; then
test -d "$1/.";
else
- case $1 in
+ case $1 in #(
-*)set "./$1";;
esac;
- case `ls -ld'$as_ls_L_option' "$1" 2>/dev/null` in
+ case `ls -ld'$as_ls_L_option' "$1" 2>/dev/null` in #((
???[sx]*):;;*)false;;esac;fi
'\'' sh
'
exec 6>&1
-
-# Save the log message, to keep $[0] and so on meaningful, and to
+## ----------------------------------- ##
+## Main body of $CONFIG_STATUS script. ##
+## ----------------------------------- ##
+# Save the log message, to keep $0 and so on meaningful, and to
# report actual input values of CONFIG_FILES etc. instead of their
# values after options handling.
ac_log="
-This file was extended by clustalw $as_me 2.0.12, which was
-generated by GNU Autoconf 2.63. Invocation command line was
+This file was extended by clustalw $as_me 2.1, which was
+generated by GNU Autoconf 2.65. Invocation command line was
CONFIG_FILES = $CONFIG_FILES
CONFIG_HEADERS = $CONFIG_HEADERS
config_commands=" depfiles"
ac_cs_usage="\
-\`$as_me' instantiates files from templates according to the
-current configuration.
+\`$as_me' instantiates files and other configuration actions
+from templates according to the current configuration. Unless the files
+and actions are specified as TAGs, all are instantiated by default.
-Usage: $0 [OPTION]... [FILE]...
+Usage: $0 [OPTION]... [TAG]...
-h, --help print this help, then exit
-V, --version print version number and configuration settings, then exit
+ --config print configuration, then exit
-q, --quiet, --silent
do not print progress messages
-d, --debug don't remove temporary files
Configuration commands:
$config_commands
-Report bugs to <bug-autoconf@gnu.org>."
+Report bugs to <clustalw@ucd.ie>."
+ac_cs_config=""
ac_cs_version="\
-clustalw config.status 2.0.12
-configured by ./configure, generated by GNU Autoconf 2.63,
- with options \"\"
+clustalw config.status 2.1
+configured by ./configure, generated by GNU Autoconf 2.65,
+ with options \"$ac_cs_config\"
-Copyright (C) 2008 Free Software Foundation, Inc.
+Copyright (C) 2009 Free Software Foundation, Inc.
This config.status script is free software; the Free Software Foundation
gives unlimited permission to copy, distribute and modify it."
-ac_pwd='/homes/pvtroshin/workspace/clustengine/binaries/src/clustalw'
+ac_pwd='/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw'
srcdir='.'
INSTALL='/usr/bin/install -c'
MKDIR_P='/bin/mkdir -p'
ac_cs_recheck=: ;;
--version | --versio | --versi | --vers | --ver | --ve | --v | -V )
$as_echo "$ac_cs_version"; exit ;;
+ --config | --confi | --conf | --con | --co | --c )
+ $as_echo "$ac_cs_config"; exit ;;
--debug | --debu | --deb | --de | --d | -d )
debug=: ;;
--file | --fil | --fi | --f )
case $ac_optarg in
*\'*) ac_optarg=`$as_echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"` ;;
esac
- CONFIG_FILES="$CONFIG_FILES '$ac_optarg'"
+ as_fn_append CONFIG_FILES " '$ac_optarg'"
ac_need_defaults=false;;
--header | --heade | --head | --hea )
$ac_shift
case $ac_optarg in
*\'*) ac_optarg=`$as_echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"` ;;
esac
- CONFIG_HEADERS="$CONFIG_HEADERS '$ac_optarg'"
+ as_fn_append CONFIG_HEADERS " '$ac_optarg'"
ac_need_defaults=false;;
--he | --h)
# Conflict between --help and --header
- { $as_echo "$as_me: error: ambiguous option: $1
-Try \`$0 --help' for more information." >&2
- { (exit 1); exit 1; }; };;
+ as_fn_error "ambiguous option: \`$1'
+Try \`$0 --help' for more information.";;
--help | --hel | -h )
$as_echo "$ac_cs_usage"; exit ;;
-q | -quiet | --quiet | --quie | --qui | --qu | --q \
ac_cs_silent=: ;;
# This is an error.
- -*) { $as_echo "$as_me: error: unrecognized option: $1
-Try \`$0 --help' for more information." >&2
- { (exit 1); exit 1; }; } ;;
+ -*) as_fn_error "unrecognized option: \`$1'
+Try \`$0 --help' for more information." ;;
- *) ac_config_targets="$ac_config_targets $1"
+ *) as_fn_append ac_config_targets " $1"
ac_need_defaults=false ;;
esac
"src/Makefile") CONFIG_FILES="$CONFIG_FILES src/Makefile" ;;
"src/clustalw_version.h") CONFIG_FILES="$CONFIG_FILES src/clustalw_version.h" ;;
- *) { { $as_echo "$as_me:$LINENO: error: invalid argument: $ac_config_target" >&5
-$as_echo "$as_me: error: invalid argument: $ac_config_target" >&2;}
- { (exit 1); exit 1; }; };;
+ *) as_fn_error "invalid argument: \`$ac_config_target'" "$LINENO" 5;;
esac
done
trap 'exit_status=$?
{ test -z "$tmp" || test ! -d "$tmp" || rm -fr "$tmp"; } && exit $exit_status
' 0
- trap '{ (exit 1); exit 1; }' 1 2 13 15
+ trap 'as_fn_exit 1' 1 2 13 15
}
# Create a (secure) tmp directory for tmp files.
{
tmp=./conf$$-$RANDOM
(umask 077 && mkdir "$tmp")
-} ||
-{
- $as_echo "$as_me: cannot create a temporary directory in ." >&2
- { (exit 1); exit 1; }
-}
+} || as_fn_error "cannot create a temporary directory in ." "$LINENO" 5
# Set up the scripts for CONFIG_FILES section.
# No need to generate them if there are no CONFIG_FILES.
if test -n "$CONFIG_FILES"; then
-ac_cr='\r'
+ac_cr=`echo X | tr X '\015'`
+# On cygwin, bash can eat \r inside `` if the user requested igncr.
+# But we know of no other shell where ac_cr would be empty at this
+# point, so we can use a bashism as a fallback.
+if test "x$ac_cr" = x; then
+ eval ac_cr=\$\'\\r\'
+fi
ac_cs_awk_cr=`$AWK 'BEGIN { print "a\rb" }' </dev/null 2>/dev/null`
if test "$ac_cs_awk_cr" = "a${ac_cr}b"; then
- ac_cs_awk_cr='\\r'
+ ac_cs_awk_cr='\r'
else
ac_cs_awk_cr=$ac_cr
fi
echo 'BEGIN {' >"$tmp/subs1.awk" &&
cat >>"$tmp/subs1.awk" <<\_ACAWK &&
+S["am__EXEEXT_FALSE"]=""
+S["am__EXEEXT_TRUE"]="#"
S["LTLIBOBJS"]=""
S["LIBOBJS"]=""
S["EGREP"]="/bin/grep -E"
S["CC"]="gcc"
S["am__untar"]="${AMTAR} xf -"
S["am__tar"]="${AMTAR} chof - \"$$tardir\""
-S["AMTAR"]="${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run tar"
+S["AMTAR"]="${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run tar"
S["am__leading_dot"]="."
S["SET_MAKE"]=""
S["AWK"]="gawk"
S["MKDIR_P"]="/bin/mkdir -p"
S["INSTALL_STRIP_PROGRAM"]="$(install_sh) -c -s"
S["STRIP"]=""
-S["install_sh"]="$(SHELL) /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/install-sh"
-S["MAKEINFO"]="${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run makeinfo"
-S["AUTOHEADER"]="${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run autoheader"
-S["AUTOMAKE"]="${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run automake-1.10"
-S["AUTOCONF"]="${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run autoconf"
-S["ACLOCAL"]="${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run aclocal-1.10"
-S["VERSION"]="2.0.12"
+S["install_sh"]="${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/install-sh"
+S["MAKEINFO"]="${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run makeinfo"
+S["AUTOHEADER"]="${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run autoheader"
+S["AUTOMAKE"]="${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run automake-1.11"
+S["AUTOCONF"]="${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run autoconf"
+S["ACLOCAL"]="${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run aclocal-1.11"
+S["VERSION"]="2.1"
S["PACKAGE"]="clustalw"
S["CYGPATH_W"]="echo"
S["am__isrc"]=""
S["INSTALL_SCRIPT"]="${INSTALL}"
S["INSTALL_PROGRAM"]="${INSTALL}"
S["CLUSTALW_NAME"]="ClustalW"
-S["CLUSTALW_VERSION"]="2.0.12"
+S["CLUSTALW_VERSION"]="2.1"
S["target_os"]="linux-gnu"
S["target_vendor"]="unknown"
S["target_cpu"]="x86_64"
S["program_transform_name"]="s,x,x,"
S["prefix"]="/usr/local"
S["exec_prefix"]="${prefix}"
+S["PACKAGE_URL"]=""
S["PACKAGE_BUGREPORT"]="clustalw@ucd.ie"
-S["PACKAGE_STRING"]="clustalw 2.0.12"
-S["PACKAGE_VERSION"]="2.0.12"
+S["PACKAGE_STRING"]="clustalw 2.1"
+S["PACKAGE_VERSION"]="2.1"
S["PACKAGE_TARNAME"]="clustalw"
S["PACKAGE_NAME"]="clustalw"
S["PATH_SEPARATOR"]=":"
else
cat
fi < "$tmp/subs1.awk" > "$tmp/subs.awk" \
- || { { $as_echo "$as_me:$LINENO: error: could not setup config files machinery" >&5
-$as_echo "$as_me: error: could not setup config files machinery" >&2;}
- { (exit 1); exit 1; }; }
+ || as_fn_error "could not setup config files machinery" "$LINENO" 5
fi # test -n "$CONFIG_FILES"
# Set up the scripts for CONFIG_HEADERS section.
BEGIN {
D["PACKAGE_NAME"]=" \"clustalw\""
D["PACKAGE_TARNAME"]=" \"clustalw\""
-D["PACKAGE_VERSION"]=" \"2.0.12\""
-D["PACKAGE_STRING"]=" \"clustalw 2.0.12\""
+D["PACKAGE_VERSION"]=" \"2.1\""
+D["PACKAGE_STRING"]=" \"clustalw 2.1\""
D["PACKAGE_BUGREPORT"]=" \"clustalw@ucd.ie\""
+D["PACKAGE_URL"]=" \"\""
D["OS_UNIX"]=" 1"
D["PACKAGE"]=" \"clustalw\""
-D["VERSION"]=" \"2.0.12\""
+D["VERSION"]=" \"2.1\""
D["STDC_HEADERS"]=" 1"
D["HAVE_SYS_TYPES_H"]=" 1"
D["HAVE_SYS_STAT_H"]=" 1"
}
{ print }
_ACAWK
- { { $as_echo "$as_me:$LINENO: error: could not setup config headers machinery" >&5
-$as_echo "$as_me: error: could not setup config headers machinery" >&2;}
- { (exit 1); exit 1; }; }
+ as_fn_error "could not setup config headers machinery" "$LINENO" 5
fi # test -n "$CONFIG_HEADERS"
esac
case $ac_mode$ac_tag in
:[FHL]*:*);;
- :L* | :C*:*) { { $as_echo "$as_me:$LINENO: error: invalid tag $ac_tag" >&5
-$as_echo "$as_me: error: invalid tag $ac_tag" >&2;}
- { (exit 1); exit 1; }; };;
+ :L* | :C*:*) as_fn_error "invalid tag \`$ac_tag'" "$LINENO" 5;;
:[FH]-) ac_tag=-:-;;
:[FH]*) ac_tag=$ac_tag:$ac_tag.in;;
esac
[\\/$]*) false;;
*) test -f "$srcdir/$ac_f" && ac_f="$srcdir/$ac_f";;
esac ||
- { { $as_echo "$as_me:$LINENO: error: cannot find input file: $ac_f" >&5
-$as_echo "$as_me: error: cannot find input file: $ac_f" >&2;}
- { (exit 1); exit 1; }; };;
+ as_fn_error "cannot find input file: \`$ac_f'" "$LINENO" 5;;
esac
case $ac_f in *\'*) ac_f=`$as_echo "$ac_f" | sed "s/'/'\\\\\\\\''/g"`;; esac
- ac_file_inputs="$ac_file_inputs '$ac_f'"
+ as_fn_append ac_file_inputs " '$ac_f'"
done
# Let's still pretend it is `configure' which instantiates (i.e., don't
`' by configure.'
if test x"$ac_file" != x-; then
configure_input="$ac_file. $configure_input"
- { $as_echo "$as_me:$LINENO: creating $ac_file" >&5
+ { $as_echo "$as_me:${as_lineno-$LINENO}: creating $ac_file" >&5
$as_echo "$as_me: creating $ac_file" >&6;}
fi
# Neutralize special characters interpreted by sed in replacement strings.
case $ac_tag in
*:-:* | *:-) cat >"$tmp/stdin" \
- || { { $as_echo "$as_me:$LINENO: error: could not create $ac_file" >&5
-$as_echo "$as_me: error: could not create $ac_file" >&2;}
- { (exit 1); exit 1; }; } ;;
+ || as_fn_error "could not create $ac_file" "$LINENO" 5 ;;
esac
;;
esac
q
}
s/.*/./; q'`
- { as_dir="$ac_dir"
- case $as_dir in #(
- -*) as_dir=./$as_dir;;
- esac
- test -d "$as_dir" || { $as_mkdir_p && mkdir -p "$as_dir"; } || {
- as_dirs=
- while :; do
- case $as_dir in #(
- *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
- *) as_qdir=$as_dir;;
- esac
- as_dirs="'$as_qdir' $as_dirs"
- as_dir=`$as_dirname -- "$as_dir" ||
-$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$as_dir" : 'X\(//\)[^/]' \| \
- X"$as_dir" : 'X\(//\)$' \| \
- X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
-$as_echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
- s//\1/
- q
- }
- /^X\(\/\/\)[^/].*/{
- s//\1/
- q
- }
- /^X\(\/\/\)$/{
- s//\1/
- q
- }
- /^X\(\/\).*/{
- s//\1/
- q
- }
- s/.*/./; q'`
- test -d "$as_dir" && break
- done
- test -z "$as_dirs" || eval "mkdir $as_dirs"
- } || test -d "$as_dir" || { { $as_echo "$as_me:$LINENO: error: cannot create directory $as_dir" >&5
-$as_echo "$as_me: error: cannot create directory $as_dir" >&2;}
- { (exit 1); exit 1; }; }; }
+ as_dir="$ac_dir"; as_fn_mkdir_p
ac_builddir=.
case "$ac_dir" in
# If the template does not know about datarootdir, expand it.
# FIXME: This hack should be removed a few years after 2.60.
ac_datarootdir_hack=; ac_datarootdir_seen=
-
ac_sed_dataroot='
/datarootdir/ {
p
/@docdir@/p
/@infodir@/p
/@localedir@/p
-/@mandir@/p
-'
+/@mandir@/p'
case `eval "sed -n \"\$ac_sed_dataroot\" $ac_file_inputs"` in
*datarootdir*) ac_datarootdir_seen=yes;;
*@datadir@*|*@docdir@*|*@infodir@*|*@localedir@*|*@mandir@*)
- { $as_echo "$as_me:$LINENO: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&5
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&5
$as_echo "$as_me: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&2;}
ac_datarootdir_hack='
s&@datadir@&${datarootdir}&g
s&@infodir@&${datarootdir}/info&g
s&@localedir@&${datarootdir}/locale&g
s&@mandir@&${datarootdir}/man&g
- s&\${datarootdir}&${prefix}/share&g' ;;
+ s&\${datarootdir}&${prefix}/share&g' ;;
esac
ac_sed_extra="/^[ ]*VPATH[ ]*=/{
s/:*\$(srcdir):*/:/
$ac_datarootdir_hack
"
eval sed \"\$ac_sed_extra\" "$ac_file_inputs" | $AWK -f "$tmp/subs.awk" >$tmp/out \
- || { { $as_echo "$as_me:$LINENO: error: could not create $ac_file" >&5
-$as_echo "$as_me: error: could not create $ac_file" >&2;}
- { (exit 1); exit 1; }; }
+ || as_fn_error "could not create $ac_file" "$LINENO" 5
test -z "$ac_datarootdir_hack$ac_datarootdir_seen" &&
{ ac_out=`sed -n '/\${datarootdir}/p' "$tmp/out"`; test -n "$ac_out"; } &&
{ ac_out=`sed -n '/^[ ]*datarootdir[ ]*:*=/p' "$tmp/out"`; test -z "$ac_out"; } &&
- { $as_echo "$as_me:$LINENO: WARNING: $ac_file contains a reference to the variable \`datarootdir'
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file contains a reference to the variable \`datarootdir'
which seems to be undefined. Please make sure it is defined." >&5
$as_echo "$as_me: WARNING: $ac_file contains a reference to the variable \`datarootdir'
which seems to be undefined. Please make sure it is defined." >&2;}
-) cat "$tmp/out" && rm -f "$tmp/out";;
*) rm -f "$ac_file" && mv "$tmp/out" "$ac_file";;
esac \
- || { { $as_echo "$as_me:$LINENO: error: could not create $ac_file" >&5
-$as_echo "$as_me: error: could not create $ac_file" >&2;}
- { (exit 1); exit 1; }; }
+ || as_fn_error "could not create $ac_file" "$LINENO" 5
;;
:H)
#
$as_echo "/* $configure_input */" \
&& eval '$AWK -f "$tmp/defines.awk"' "$ac_file_inputs"
} >"$tmp/config.h" \
- || { { $as_echo "$as_me:$LINENO: error: could not create $ac_file" >&5
-$as_echo "$as_me: error: could not create $ac_file" >&2;}
- { (exit 1); exit 1; }; }
+ || as_fn_error "could not create $ac_file" "$LINENO" 5
if diff "$ac_file" "$tmp/config.h" >/dev/null 2>&1; then
- { $as_echo "$as_me:$LINENO: $ac_file is unchanged" >&5
+ { $as_echo "$as_me:${as_lineno-$LINENO}: $ac_file is unchanged" >&5
$as_echo "$as_me: $ac_file is unchanged" >&6;}
else
rm -f "$ac_file"
mv "$tmp/config.h" "$ac_file" \
- || { { $as_echo "$as_me:$LINENO: error: could not create $ac_file" >&5
-$as_echo "$as_me: error: could not create $ac_file" >&2;}
- { (exit 1); exit 1; }; }
+ || as_fn_error "could not create $ac_file" "$LINENO" 5
fi
else
$as_echo "/* $configure_input */" \
&& eval '$AWK -f "$tmp/defines.awk"' "$ac_file_inputs" \
- || { { $as_echo "$as_me:$LINENO: error: could not create -" >&5
-$as_echo "$as_me: error: could not create -" >&2;}
- { (exit 1); exit 1; }; }
+ || as_fn_error "could not create -" "$LINENO" 5
fi
# Compute "$ac_file"'s index in $config_headers.
_am_arg="$ac_file"
s/.*/./; q'`/stamp-h$_am_stamp_count
;;
- :C) { $as_echo "$as_me:$LINENO: executing $ac_file commands" >&5
+ :C) { $as_echo "$as_me:${as_lineno-$LINENO}: executing $ac_file commands" >&5
$as_echo "$as_me: executing $ac_file commands" >&6;}
;;
esac
q
}
s/.*/./; q'`
- { as_dir=$dirpart/$fdir
- case $as_dir in #(
- -*) as_dir=./$as_dir;;
- esac
- test -d "$as_dir" || { $as_mkdir_p && mkdir -p "$as_dir"; } || {
- as_dirs=
- while :; do
- case $as_dir in #(
- *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
- *) as_qdir=$as_dir;;
- esac
- as_dirs="'$as_qdir' $as_dirs"
- as_dir=`$as_dirname -- "$as_dir" ||
-$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
- X"$as_dir" : 'X\(//\)[^/]' \| \
- X"$as_dir" : 'X\(//\)$' \| \
- X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
-$as_echo X"$as_dir" |
- sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
- s//\1/
- q
- }
- /^X\(\/\/\)[^/].*/{
- s//\1/
- q
- }
- /^X\(\/\/\)$/{
- s//\1/
- q
- }
- /^X\(\/\).*/{
- s//\1/
- q
- }
- s/.*/./; q'`
- test -d "$as_dir" && break
- done
- test -z "$as_dirs" || eval "mkdir $as_dirs"
- } || test -d "$as_dir" || { { $as_echo "$as_me:$LINENO: error: cannot create directory $as_dir" >&5
-$as_echo "$as_me: error: cannot create directory $as_dir" >&2;}
- { (exit 1); exit 1; }; }; }
+ as_dir=$dirpart/$fdir; as_fn_mkdir_p
# echo "creating $dirpart/$file"
echo '# dummy' > "$dirpart/$file"
done
done # for ac_tag
-{ (exit 0); exit 0; }
+as_fn_exit 0
git://source.jalview.org / jabaws.git / blobdiff