-# Makefile.in generated by automake 1.10.2 from Makefile.am.
+# Makefile.in generated by automake 1.11.1 from Makefile.am.
# m4/Makefile. Generated from Makefile.in by configure.
# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006, 2007, 2008 Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006, 2007, 2008, 2009 Free Software Foundation,
+# Inc.
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
pkgdatadir = $(datadir)/clustalw
-pkglibdir = $(libdir)/clustalw
pkgincludedir = $(includedir)/clustalw
+pkglibdir = $(libdir)/clustalw
+pkglibexecdir = $(libexecdir)/clustalw
am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
install_sh_DATA = $(install_sh) -c -m 644
install_sh_PROGRAM = $(install_sh) -c
mkinstalldirs = $(install_sh) -d
CONFIG_HEADER = $(top_builddir)/src/config.h
CONFIG_CLEAN_FILES =
+CONFIG_CLEAN_VPATH_FILES =
SOURCES =
DIST_SOURCES =
am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`;
$(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \
*) f=$$p;; \
esac;
-am__strip_dir = `echo $$p | sed -e 's|^.*/||'`;
+am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`;
+am__install_max = 40
+am__nobase_strip_setup = \
+ srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'`
+am__nobase_strip = \
+ for p in $$list; do echo "$$p"; done | sed -e "s|$$srcdirstrip/||"
+am__nobase_list = $(am__nobase_strip_setup); \
+ for p in $$list; do echo "$$p $$p"; done | \
+ sed "s| $$srcdirstrip/| |;"' / .*\//!s/ .*/ ./; s,\( .*\)/[^/]*$$,\1,' | \
+ $(AWK) 'BEGIN { files["."] = "" } { files[$$2] = files[$$2] " " $$1; \
+ if (++n[$$2] == $(am__install_max)) \
+ { print $$2, files[$$2]; n[$$2] = 0; files[$$2] = "" } } \
+ END { for (dir in files) print dir, files[dir] }'
+am__base_list = \
+ sed '$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;s/\n/ /g' | \
+ sed '$$!N;$$!N;$$!N;$$!N;s/\n/ /g'
am__installdirs = "$(DESTDIR)$(m4datadir)"
-m4dataDATA_INSTALL = $(INSTALL_DATA)
DATA = $(m4data_DATA)
DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-ACLOCAL = ${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run aclocal-1.10
-AMTAR = ${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run tar
-AUTOCONF = ${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run autoconf
-AUTOHEADER = ${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run autoheader
-AUTOMAKE = ${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run automake-1.10
+ACLOCAL = ${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run aclocal-1.11
+AMTAR = ${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run tar
+AUTOCONF = ${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run autoconf
+AUTOHEADER = ${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run autoheader
+AUTOMAKE = ${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run automake-1.11
AWK = gawk
CC = gcc
CCDEPMODE = depmode=gcc3
CFLAGS = -g -O2
CLUSTALW_NAME = ClustalW
-CLUSTALW_VERSION = 2.0.12
+CLUSTALW_VERSION = 2.1
CPPFLAGS =
CXX = g++
CXXCPP = g++ -E
LIBOBJS =
LIBS =
LTLIBOBJS =
-MAKEINFO = ${SHELL} /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/missing --run makeinfo
+MAKEINFO = ${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/missing --run makeinfo
MKDIR_P = /bin/mkdir -p
OBJEXT = o
PACKAGE = clustalw
PACKAGE_BUGREPORT = clustalw@ucd.ie
PACKAGE_NAME = clustalw
-PACKAGE_STRING = clustalw 2.0.12
+PACKAGE_STRING = clustalw 2.1
PACKAGE_TARNAME = clustalw
-PACKAGE_VERSION = 2.0.12
+PACKAGE_URL =
+PACKAGE_VERSION = 2.1
PATH_SEPARATOR = :
RANLIB = ranlib
SET_MAKE =
SHELL = /bin/sh
STRIP =
-VERSION = 2.0.12
-abs_builddir = /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/m4
-abs_srcdir = /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/m4
-abs_top_builddir = /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw
-abs_top_srcdir = /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw
+VERSION = 2.1
+abs_builddir = /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/m4
+abs_srcdir = /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/m4
+abs_top_builddir = /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw
+abs_top_srcdir = /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw
ac_ct_CC = gcc
ac_ct_CXX = g++
am__include = include
htmldir = ${docdir}
includedir = ${prefix}/include
infodir = ${datarootdir}/info
-install_sh = $(SHELL) /homes/pvtroshin/workspace/clustengine/binaries/src/clustalw/install-sh
+install_sh = ${SHELL} /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/clustalw/install-sh
libdir = ${exec_prefix}/lib
libexecdir = ${exec_prefix}/libexec
localedir = ${datarootdir}/locale
exit 1;; \
esac; \
done; \
- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu m4/Makefile'; \
- cd $(top_srcdir) && \
- $(AUTOMAKE) --gnu m4/Makefile
+ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu m4/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+ $(AUTOMAKE) --gnu m4/Makefile
.PRECIOUS: Makefile
Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
@case '$?' in \
cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
$(ACLOCAL_M4): $(am__aclocal_m4_deps)
cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(am__aclocal_m4_deps):
install-m4dataDATA: $(m4data_DATA)
@$(NORMAL_INSTALL)
test -z "$(m4datadir)" || $(MKDIR_P) "$(DESTDIR)$(m4datadir)"
- @list='$(m4data_DATA)'; for p in $$list; do \
+ @list='$(m4data_DATA)'; test -n "$(m4datadir)" || list=; \
+ for p in $$list; do \
if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
- f=$(am__strip_dir) \
- echo " $(m4dataDATA_INSTALL) '$$d$$p' '$(DESTDIR)$(m4datadir)/$$f'"; \
- $(m4dataDATA_INSTALL) "$$d$$p" "$(DESTDIR)$(m4datadir)/$$f"; \
+ echo "$$d$$p"; \
+ done | $(am__base_list) | \
+ while read files; do \
+ echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(m4datadir)'"; \
+ $(INSTALL_DATA) $$files "$(DESTDIR)$(m4datadir)" || exit $$?; \
done
uninstall-m4dataDATA:
@$(NORMAL_UNINSTALL)
- @list='$(m4data_DATA)'; for p in $$list; do \
- f=$(am__strip_dir) \
- echo " rm -f '$(DESTDIR)$(m4datadir)/$$f'"; \
- rm -f "$(DESTDIR)$(m4datadir)/$$f"; \
- done
+ @list='$(m4data_DATA)'; test -n "$(m4datadir)" || list=; \
+ files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
+ test -n "$$files" || exit 0; \
+ echo " ( cd '$(DESTDIR)$(m4datadir)' && rm -f" $$files ")"; \
+ cd "$(DESTDIR)$(m4datadir)" && rm -f $$files
tags: TAGS
TAGS:
if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
if test -d $$d/$$file; then \
dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
+ if test -d "$(distdir)/$$file"; then \
+ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+ fi; \
if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
- cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \
+ cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
+ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
fi; \
- cp -pR $$d/$$file $(distdir)$$dir || exit 1; \
+ cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
else \
- test -f $(distdir)/$$file \
- || cp -p $$d/$$file $(distdir)/$$file \
+ test -f "$(distdir)/$$file" \
+ || cp -p $$d/$$file "$(distdir)/$$file" \
|| exit 1; \
fi; \
done
distclean-generic:
-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+ -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
maintainer-clean-generic:
@echo "This command is intended for maintainers to use"
html: html-am
+html-am:
+
info: info-am
info-am:
install-dvi: install-dvi-am
+install-dvi-am:
+
install-exec-am:
install-html: install-html-am
+install-html-am:
+
install-info: install-info-am
+install-info-am:
+
install-man:
install-pdf: install-pdf-am
+install-pdf-am:
+
install-ps: install-ps-am
+install-ps-am:
+
installcheck-am:
maintainer-clean: maintainer-clean-am
maintainer-clean-generic mostlyclean mostlyclean-generic pdf \
pdf-am ps ps-am uninstall uninstall-am uninstall-m4dataDATA
+
# Tell versions [3.59,3.63) of GNU make to not export all variables.
# Otherwise a system limit (for SysV at least) may be exceeded.
.NOEXPORT: