new mafft v 6.857 with extensions

[jabaws.git] / binaries / src / mafft / core / mtxutl.h

diff --git a/binaries/src/mafft/core/mtxutl.h b/binaries/src/mafft/core/mtxutl.h
new file mode 100644 (file)
index 0000000..dd31321
--- /dev/null
+++ b/binaries/src/mafft/core/mtxutl.h
@@ -0,0 +1,50 @@
+void MtxuntDouble( double **, int );
+void MtxmltDouble( double **, double **, int );
+
+char *AllocateCharVec( int );
+void FreeCharVec( char * );
+
+char **AllocateCharMtx( int, int);
+void ReallocateCharMtx( char **, int, int);
+void FreeCharMtx( char ** );
+
+float *AllocateFloatVec( int );
+void FreeFloatVec( float * );
+
+float **AllocateFloatHalfMtx( int );
+float **AllocateFloatMtx( int, int );
+void FreeFloatHalfMtx( float **, int );
+void FreeFloatMtx( float ** );
+
+float **AlocateFloatTri( int );
+void FreeFloatTri( float ** );
+
+int *AllocateIntVec( int );
+void FreeIntVec( int * );
+
+int **AllocateIntMtx( int, int );
+void FreeIntMtx( int ** );
+
+char ***AllocateCharCub( int, int, int );
+void FreeCharCub( char *** );
+
+int ***AllocateIntCub( int, int, int );
+void FreeIntCub( int *** );
+
+double *AllocateDoubleVec( int );
+void FreeDoubleVec( double * );
+
+double **AllocateDoubleMtx( int, int );
+void FreeDoubleMtx( double ** );
+
+double ***AllocateDoubleCub( int, int, int );
+void FreeDoubleCub( double *** );
+
+float ***AllocateFloatCub( int, int, int );
+void FreeFloatCub( float *** );
+
+short *AllocateShortVec( int );
+void FreeShortVec( short * );
+
+short **AllocateShortMtx( int, int );
+void FreeShortMtx( short ** );