--argc;
goto nextoption;
case 'k':
- kimuraR = atoi( *++argv );
+ kimuraR = myatoi( *++argv );
fprintf( stderr, "kimuraR = %d\n", kimuraR );
--argc;
goto nextoption;
case 'b':
- nblosum = atoi( *++argv );
+ nblosum = myatoi( *++argv );
scoremtx = 1;
fprintf( stderr, "blosum %d\n", nblosum );
--argc;
goto nextoption;
case 'j':
- pamN = atoi( *++argv );
+ pamN = myatoi( *++argv );
scoremtx = 0;
fprintf( stderr, "jtt %d\n", pamN );
--argc;
break;
/* modification end. */
case 'z':
- fftThreshold = atoi( *++argv );
+ fftThreshold = myatoi( *++argv );
--argc;
goto nextoption;
case 'w':
- fftWinSize = atoi( *++argv );
+ fftWinSize = myatoi( *++argv );
--argc;
goto nextoption;
case 'Z':