JWS-112 Bumping version of T-Coffee to version 11.00.8cbe486.

[jabaws.git] / binaries / src / tcoffee / example / 3d.aln

diff --git a/binaries/src/tcoffee/example/3d.aln b/binaries/src/tcoffee/example/3d.aln
new file mode 100644 (file)
index 0000000..442bee1
--- /dev/null
+++ b/binaries/src/tcoffee/example/3d.aln
@@ -0,0 +1,24 @@
+CLUSTAL FORMAT for T-COFFEE Version_4.39 [http://www.tcoffee.org], CPU=2.17 sec, SCORE=73, Nseq=3, Len=182 
+
+1cms            GEVASVPLTNY--LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRF
+4ape            -STGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIY
+3app            AASGVATNTPTAN-DEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVY
+                   . .. *     *. *:  : :*     :.: *****:*:** *    :.  ..:  :
+
+1cms            DPRKSSTFQNL-GKPLSIHYGTGSMQ-GILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTY
+4ape            TPSKSTTAKLLSGATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTED
+3app            NPS--ATGKELSGYTWSISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQD
+                 *   :* : * * . ** ** **   * :  *:*:*..:.   *:*  : : ....   
+
+1cms            AEFDGILGMAYPSLASE---YSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDP
+4ape            STIDGLLGLAFSTLNTVSPTQQKTFFDNAK--ASLDSPVFTADLGY-HAPGTYNFGFIDT
+3app            TNNDGLLGLAFSSINTVQPQSQTTFFDTVK--SSLAQPLFAVALKH-QQPGVYDFGFIDS
+                :  **:**:*:.:: :     . ..**.      : . :*:. :      .   :* **.
+
+1cms            SY
+4ape            TA
+3app            SK
+                : 
+
+
+