JWS-112 Bumping version of T-Coffee to version 11.00.8cbe486.

[jabaws.git] / binaries / src / tcoffee / example / sample_rnaseq2.fasta

diff --git a/binaries/src/tcoffee/example/sample_rnaseq2.fasta b/binaries/src/tcoffee/example/sample_rnaseq2.fasta
new file mode 100644 (file)
index 0000000..69a5d81
--- /dev/null
+++ b/binaries/src/tcoffee/example/sample_rnaseq2.fasta
@@ -0,0 +1,41 @@
+>OTTHUMT00000006707
+uacGGAAGCUUUAGGGAGGUGCUCUGAGACCCGAAACUAGACUCGACUUU
+AACAGACACAGACGACCCUGAAGAUGGAAAUGUUUUCUUCCAAAUUGUGC
+UGCACGUUUUUGGCGAGAGCAUGGGGCUGUGCGGCGUCCCCUCCCUGGCG
+CCCACCUGUGCCCUGCACACUGGCCUGCACUGUGGUGAUCUCGCUUGGCC
+CCCACCUGAUUCCUGACAUACAGCAGAGGAAGCUUAGGCUCAGGUGGAAC
+AGCCUCAACUGAUUCAGUCCCUGAACUUCCGUACACAGCCCUGGAGUCGU
+CUUAGAgccaugauuuauuuaacuguucuuucauuuuacagaacauaaaa
+uguauuguuuccaacuuuuuuccuaugguaaauaauacuaaaguaaauau
+cucugugcaugaaucuuuuuguauauguuggaauauccuuaagauaaggc
+cccagaacuaaaaguacccugucaaagggugagcauuuCCGGUUCCCCUG
+CUGUGCUUUGCUGCGUUGUUCUCCCCUGCUGCAACGUUCUCACUCCACAA
+UCCUGGGGCAGGUAGGGGAGGCCCAGCugaguuuggaucauaauccugaa
+agacaca
+>OTTHUMT00000043281
+aucccagcuacucgggaggcugaggcaggagaaucacuugaacccgggag
+gcagagguugcagugagccgagaucgcaccccugcacuccagccugggug
+acagagcaagacuccaucucaaaaaaaauaaaggaaaUAUGCGUCGUUGG
+AUGCUGUAUGACAAUCAAGCUACUUAUAACAAACAAAAUUGAGAAUGAAG
+gauuaugauccaaacucAGCUGGGCCUCCCCUCCCUGCCCCAGGAUUGUG
+GAGUGAGAACGUUGCAGCAGGAGAGAACAACGCAGCAAAGCACAGCAGGG
+GAACCGgaaaugcucaccuuuugacaggguacuuuuaguucuggggccuu
+aucuuaaggauauuccaacauauacaaaaagauucaugcacagagauaug
+uacuuuaguauuauuuaccauaggaaaaaaguuggaaacaauacauuuua
+uguucuguaaaaugaaagaacaguuaaauaaaucauggCUCUAAGACGAC
+UCCAGGGCUGUGUACGGAAGUUCAGGGACAGAAUCAGUUGAGGCUGUUCC
+ACCUGAGCCUAAGCUUCCUCUGCUGUAUGUCGGGAAUCAGGUGGGGGCCA
+AGCGAGAUCACCACAGUGCAGGCCAGUGUGCAGGGCACAGGUGGGCACCA
+GGGAGGGGACGCCGCACAGCCCCAUGCUCUCGCCAAAAACGUGCAGCACA
+AUUUGGAAGAAAACAUUUCCAUCUGUUAAUAAAGAGCAAGGGCCUCUGGU
+CAUAAGUG
+>OTTHUMT00000007987
+GAGGUGCUCUGAGACCCGAAACUAGACUCGACUUUAACAGACACAGACGA
+CCCUGAAGGCGAGACugucugcuggugggaugcuggAUGGAAACGUUUUC
+UUCCAAAUUGUGCUGCACGUUUUUGGCGAGAGCAUGGGGCUGUGCGGCGU
+CCCCUCCCUGGCGCCCACCUGUGCCCUGCACACUGGCCUGCACUGUGGUG
+AUCUCGCUUGGCCCCCACCUGAUUCCCGACAUACAGCAGAGGAACCUUAG
+GCUCAGGUGGAACAGCCUCAACUGAUUCUGUCCCUGAACUUCCGUACACA
+GCCCUGGAGUCGUCUUAGAGccaugauuuauuuaacuguucuuucauuuu
+acagaacauaaaauguauuguuuccaacuuuuuuccuaugguaaauaaua
+cuaaaguaaauaucucugugcaugaa