--- /dev/null
+# STOCKHOLM 1.0
+
+OTTHUMT00000006707 uacGGAAGCU.UUAGGGAGGUGCUCUGAGACCCGAAACUAGACUCGACUU
+OTTHUMT00000043281 .aucccagcuacucgggagg....cugaggcaggagaau.cacuugaacc
+OTTHUMT00000007987 ................G.GGUGCUCUGAGACCCGAAACUAGACUCGACUU
+#=GC SS_cons ................((((.....((((.............)))).)))
+
+OTTHUMT00000006707 UAACAGACACAGACGACCCUGAA.....G.....................
+OTTHUMT00000043281 cgggaggcagagguugcaguga.gccgag.....................
+OTTHUMT00000007987 UAACAGACACAGACGACCCUGAAGGCGAGACugucugcuggugggaugcu
+#=GC SS_cons )..(((.....((((((((((.......(.....................
+
+OTTHUMT00000006707 ..AUGGAAAUGUUUUCUUCCAAAUUGUGC.....UGCACGUUUU.....U
+OTTHUMT00000043281 ..aucgcaccccugcacuccagccugggugacagagcaagacuccaucuc
+OTTHUMT00000007987 ggAUGGAAACGUUUUCUUCCAAAUUGUGC.....UGCACGUUUU.....U
+#=GC SS_cons ..(.((((....)))).))))...(((((.....(((......(.....(
+
+OTTHUMT00000006707 GGCGAG.AGCAUGGGGCUGUGCGGCGUCCC...CUCCCUGGCGC.....C
+OTTHUMT00000043281 aaaaaaaauaaaggaaaUAUGCGUCGUUGGAUGCUGUAUGACAAUCAAGC
+OTTHUMT00000007987 GGCGAG.AGCAUGGGGCUGUGCGGCGUCCC...CUCCCUGGCGC.....C
+#=GC SS_cons ((.((.......(((((((.((((((((...........))))).....)
+
+OTTHUMT00000006707 CACCUGUGCCCUGCACACU.G.GCCUGCACUGUGGUGAU.....CUC.GC
+OTTHUMT00000043281 UACUUAUAACAAACAAAAUUGAGAAUGAAGgauuaugauccaaacucAGC
+OTTHUMT00000007987 CACCUGUGCCCUGCACACU.G.GCCUGCACUGUGGUGAU.....CUC.GC
+#=GC SS_cons ((((.((((...((........))..))))...))))...........))
+
+OTTHUMT00000006707 UUGGCCC....CCACCUGA.......UUCC....UGACA....UACAGCA
+OTTHUMT00000043281 UGGGCCUCCCCUC.CCUGCCCCAGGAUUGUGGAGUGAGAACGUUGCAGCA
+OTTHUMT00000007987 UUGGCCC....CCACCUGA.......UUCC....CGACA....UACAGCA
+#=GC SS_cons .))))))....)..............)).)....)))..........)))
+
+OTTHUMT00000006707 GA..GGAAG....C..UUAGGCUCAGGUGG..AACA.....GCCUCAACU
+OTTHUMT00000043281 GGAGAGAACAACGCAGCAAAGCACAGCAGGGGAACCGgaaaugcucaccu
+OTTHUMT00000007987 GA..GGAAC....C..UUAGGCUCAGGUGG..AACA.....GCCUCAACU
+#=GC SS_cons )...(((((.......(((((..(.(((.............)))((....
+
+OTTHUMT00000006707 ...GAUUCAGUCCCUGAACUUCCGUACA..CAGCCCUGGAGUCGUCU...
+OTTHUMT00000043281 uuugacaggguacuuuuaguucuggggccuuaucuuaaggauauuccaac
+OTTHUMT00000007987 ...GAUUCUGUCCCUGAACUUCCGUACA..CAGCCCUGGAGUCGUCU...
+#=GC SS_cons ...))....)..))))).)))))...))..)).....)).))))))....
+
+OTTHUMT00000006707 .UAGAgc.caugauuuauuua......acuguucuuucauuuuacagaac
+OTTHUMT00000043281 auauacaaaaagauucaugcacagagauauguacuuuaguauuauuuacc
+OTTHUMT00000007987 .UAGAGc.caugauuuauuua......acuguucuuucauuuuacagaac
+#=GC SS_cons ............((((((((........((((...........))))...
+
+OTTHUMT00000006707 aua..aaauguauuguuuccaa..cuuu.uuuccuaugguaa.....aua
+OTTHUMT00000043281 auaggaaaaaaguuggaaacaauacauuuuauguucuguaaaaugaaaga
+OTTHUMT00000007987 aua..aaauguauuguuuccaa..cuuu.uuuccuaugguaa.....aua
+#=GC SS_cons .........((((((((((((...............))).)).....)))
+
+OTTHUMT00000006707 auacuaaaguaaau.aucucugug.caugaaucuu....uuuguau..au
+OTTHUMT00000043281 acaguuaaauaaaucauggCUCUAAGACGACUCCAGGGCUGUGUACGGAA
+OTTHUMT00000007987 auacuaaaguaaau.aucucug............................
+#=GC SS_cons ))))..)))))))).....)))............................
+
+OTTHUMT00000006707 guu..ggaauauccuuaagauaagg......ccccagaacuaaaaguacc
+OTTHUMT00000043281 GUUCAGGGACAGAAUC.AGUUGAGGCUGUUCCACCUGAGCCUAAGCUUCC
+OTTHUMT00000007987 ..................................................
+#=GC SS_cons ..................................................
+
+OTTHUMT00000006707 .cugucaaa.g...ggug.......a..gcauuuCCG.............
+OTTHUMT00000043281 UCUGCUGUAUGUCGGGAAUCAGGUGGGGGCCAAGCGAGAUCACCACAGUG
+OTTHUMT00000007987 ..................................................
+#=GC SS_cons ..................................................
+
+OTTHUMT00000006707 ...GUUC.CCCUGCUGUGCUUUGCUGCGUUGUUCUCCC............
+OTTHUMT00000043281 CAGGC.CAGUGUGC.....AGGGCACAGGUGGGCACCAGGGAGGGGACGC
+OTTHUMT00000007987 ..................................................
+#=GC SS_cons ..................................................
+
+OTTHUMT00000006707 .CUGCUGCAACGUUCUCACUCCACAAUCCUGGGGCAGG.UAGGGG.A...
+OTTHUMT00000043281 CGCACAGCCCCAUGCUCUCGCCAAAAACGUGCAGCACAAUUU.GGAAGAA
+OTTHUMT00000007987 ..................................................
+#=GC SS_cons ..................................................
+
+OTTHUMT00000006707 ....GGCCCAGCug..aguuuggaucauaauccu...gaaagacaca
+OTTHUMT00000043281 AACAUUUCCAUCUGUUAAUAAAGAGCAAGGGCCUCUGGUCAUAAGUG
+OTTHUMT00000007987 .....................................ugcau..gaa
+#=GC SS_cons ...............................................
+
+//